Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: -
Assembly: GCA_963969555.1
Location: OZ018383.1:27407775-27430969[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.2 1.3e+03 2.2 0.1 5 15 119 129 117 132 0.80

2 11 0.00046 0.085 15.5 0.4 2 20 262 280 261 283 0.92

3 11 0.0013 0.25 14.0 2.4 1 23 289 311 289 311 0.96

4 11 0.00054 0.1 15.2 1.1 5 23 324 342 322 342 0.96

5 11 0.0005 0.093 15.3 0.3 3 23 351 372 349 372 0.94

6 11 0.0051 0.95 12.2 0.8 1 23 378 400 378 400 0.98

7 11 8.4e-05 0.016 17.8 1.2 2 23 413 434 412 434 0.96

8 11 7.7e-05 0.014 17.9 2.6 1 23 440 462 440 462 0.98

9 11 0.00035 0.065 15.8 2.1 1 23 468 490 468 490 0.97

10 11 1.6e-06 0.0003 23.2 0.6 1 23 496 519 496 519 0.96

11 11 8.2e-06 0.0015 21.0 1.8 1 23 525 547 525 547 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.2	1.3e+03	2.2	0.1	5	15	119	129	117	132	0.80
2	11	0.00046	0.085	15.5	0.4	2	20	262	280	261	283	0.92
3	11	0.0013	0.25	14.0	2.4	1	23	289	311	289	311	0.96
4	11	0.00054	0.1	15.2	1.1	5	23	324	342	322	342	0.96
5	11	0.0005	0.093	15.3	0.3	3	23	351	372	349	372	0.94
6	11	0.0051	0.95	12.2	0.8	1	23	378	400	378	400	0.98
7	11	8.4e-05	0.016	17.8	1.2	2	23	413	434	412	434	0.96
8	11	7.7e-05	0.014	17.9	2.6	1	23	440	462	440	462	0.98
9	11	0.00035	0.065	15.8	2.1	1	23	468	490	468	490	0.97
10	11	1.6e-06	0.0003	23.2	0.6	1	23	496	519	496	519	0.96
11	11	8.2e-06	0.0015	21.0	1.8	1	23	525	547	525	547	0.98

Sequence Information

Coding Sequence: ATGATAGCCAGTCAAAGTTTGGCTAAGGACGAGACCATGAACTTAACGTCCCTAGATAATGCTCAAAGTGATGTTACTCCAAACCATAAAATATCCAATGCCCCAAATATCGGGGAAGTGGTCAATTTAGAAGATAAAAACGGTAATTTAGAAGATAAAAACGGTAACttagaaataattaaagaaaccTTACCTGCAGATTTACCTGACAAGGTGTGTCGAACATGTTTAAATTTAGTGGGACCTGATGACTTGAGTGTAGTTATAAACTGTTTGGATTCTGATGATAAACTAGGTAATATGATTGCCACGTGCCTTCCACAAATAAATTTGCTTCTTTCAAATGATCCTATAATATGCCAAAAGTGCTTTACTAAGTTGGAAGACTACTATAATTTCTTTATAAGTTGCTCTAATACTGAGGCTAAATTGGTCACATATTGCAGTTCGAATAATGTTACTGCCCCCATAAAATTATGTGATGTACTAAAACATAAATTGAATGATGATTCAGAAGCTCTTAGTGTTAAATTGGAAGATGACGATGATGATGATGAAAATGATGCAGATTATAATATTGAAAATGATGATATGGATCTGGATGTAAAAAGCGAGGATGAGgaagaaataaaagaaaagagtAAGGCTAAAGTTAGAAAAAGGATATTAGTAAAGGAAAAGAAGTTAGTGAAACGAAGAaaaagaattagaaaaaaaCTTCCTAAACCAACAACCGAAGAtggaaaaactcttttttctgCAGACTTAGCTGAAGCATCAGTAAAATGTGAGATCTGCAATAAGAAATTCCCTAATAAATGGGCATTGGATAGACACACACCCAAACATACCACAGACCATAAATTTGTTTGTGAAACTTGCACAATGGGTTTTAGATATAAGCACAGCTTTGAAAAACATCTGCTTGCTCATATCAATGGGGCCCCTGTAAACAAGCCATTTGCTTGTGAGTGTGGTAAATTCTTTAATCGAAGAGCAAAGTTGAGAAAGCATGAACTAACACATGTAAAGAAGGTTAAACCATTTGGATGTGAAGAGTGTGGGAAAAGATTTGTTAATGAGGAGaaaCTTAGCAGTCACGTATTCAGAGTTCACGCCAGTGAAAAGCCCTTCAGTTGTGAGCTATGTGGCAACAAGTATACCGCCAAGTCGGGATTGGATAATCATTTCAAGACCCACTTTCCCAGTGACAAACCGAAGCCCGAACCAGACCTTATGTGTGACTTTTGTGGTAAACTGTTCTTCAGGAAATATGCTCTGGAGAAACATCGGATGAGCCATACCGGGAATAAGCCCCATAAATGTGACCAATGCGGGATGGCGTTTAAAGAAAgATATCAACTGACCATTCACAACCGTCGCCACACCGGCGAAAAACCGTTCGACTGCGAGATATGCGGTTACAAATTCACCTGCGGGAACCAGCTGAGAGTCCACATGAGAACCCACACCGGTGAGAGACCGTTCCCGTGTCAGATGTGCGACATGGCTTTTACGAGGAAAGATCATCTGATCAAGCACGTGAGAGCGATCCATACGGGCGAGCGTCCGTTCGAGTGCGAGATTTGCCTGAAAACGTTCAACCGCAGGGATTATTTGATGAAGCACAAGAAAGTGCACGTGAAACGTGGATTATAA
Protein Sequence: MIASQSLAKDETMNLTSLDNAQSDVTPNHKISNAPNIGEVVNLEDKNGNLEDKNGNLEIIKETLPADLPDKVCRTCLNLVGPDDLSVVINCLDSDDKLGNMIATCLPQINLLLSNDPIICQKCFTKLEDYYNFFISCSNTEAKLVTYCSSNNVTAPIKLCDVLKHKLNDDSEALSVKLEDDDDDDENDADYNIENDDMDLDVKSEDEEEIKEKSKAKVRKRILVKEKKLVKRRKRIRKKLPKPTTEDGKTLFSADLAEASVKCEICNKKFPNKWALDRHTPKHTTDHKFVCETCTMGFRYKHSFEKHLLAHINGAPVNKPFACECGKFFNRRAKLRKHELTHVKKVKPFGCEECGKRFVNEEKLSSHVFRVHASEKPFSCELCGNKYTAKSGLDNHFKTHFPSDKPKPEPDLMCDFCGKLFFRKYALEKHRMSHTGNKPHKCDQCGMAFKERYQLTIHNRRHTGEKPFDCEICGYKFTCGNQLRVHMRTHTGERPFPCQMCDMAFTRKDHLIKHVRAIHTGERPFECEICLKTFNRRDYLMKHKKVHVKRGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196743;
90% Identity: -
80% Identity: -