Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: -
Assembly: GCA_963969555.1
Location: OZ018380.1:12455754-12465509[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.015 2.8 10.7 2.0 1 23 51 73 51 73 0.95

2 14 0.0021 0.39 13.4 1.1 1 23 180 202 180 202 0.97

3 14 0.00052 0.096 15.3 5.0 1 23 212 235 212 235 0.98

4 14 0.22 40 7.0 0.2 1 23 307 329 307 329 0.96

5 14 4.8e-06 0.00089 21.7 3.8 1 23 1052 1074 1052 1074 0.99

6 14 0.00034 0.064 15.8 0.2 2 23 1081 1102 1080 1102 0.97

7 14 3.6e-06 0.00067 22.1 5.0 1 23 1107 1129 1107 1129 0.99

8 14 0.14 26 7.6 2.8 3 23 1137 1158 1136 1158 0.97

9 14 0.00041 0.077 15.6 1.4 1 23 1163 1185 1163 1185 0.97

10 14 0.00047 0.088 15.4 0.6 1 23 1193 1216 1193 1216 0.94

11 14 0.00011 0.02 17.4 0.2 1 23 1222 1244 1222 1244 0.98

12 14 3.1e-07 5.7e-05 25.4 1.3 1 23 1250 1272 1250 1272 0.98

13 14 6.3e-06 0.0012 21.3 3.9 1 23 1278 1300 1278 1300 0.98

14 14 7.1e-05 0.013 18.0 4.0 5 23 1309 1327 1306 1327 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.015	2.8	10.7	2.0	1	23	51	73	51	73	0.95
2	14	0.0021	0.39	13.4	1.1	1	23	180	202	180	202	0.97
3	14	0.00052	0.096	15.3	5.0	1	23	212	235	212	235	0.98
4	14	0.22	40	7.0	0.2	1	23	307	329	307	329	0.96
5	14	4.8e-06	0.00089	21.7	3.8	1	23	1052	1074	1052	1074	0.99
6	14	0.00034	0.064	15.8	0.2	2	23	1081	1102	1080	1102	0.97
7	14	3.6e-06	0.00067	22.1	5.0	1	23	1107	1129	1107	1129	0.99
8	14	0.14	26	7.6	2.8	3	23	1137	1158	1136	1158	0.97
9	14	0.00041	0.077	15.6	1.4	1	23	1163	1185	1163	1185	0.97
10	14	0.00047	0.088	15.4	0.6	1	23	1193	1216	1193	1216	0.94
11	14	0.00011	0.02	17.4	0.2	1	23	1222	1244	1222	1244	0.98
12	14	3.1e-07	5.7e-05	25.4	1.3	1	23	1250	1272	1250	1272	0.98
13	14	6.3e-06	0.0012	21.3	3.9	1	23	1278	1300	1278	1300	0.98
14	14	7.1e-05	0.013	18.0	4.0	5	23	1309	1327	1306	1327	0.96

Sequence Information

Coding Sequence: ATGACTAGAAGAGAGAaacacaagtttattagaaaacatttttggaGGGAGTGCCGAGTTGTTTTGAcggatgttaaaaaaaacaagtattataAAAGACTCCAAGAAAAGAAAGATGCAATTTCCGAAGTTTCTCATGGCAGAAAGAAGCATAGCTGTTATATCTGCTTTGAGAAGTTCTACACCAAGGAAGACCTTGCAGCGCACAAATTTGTCCATTTTTGCGAGAAGAGTAACAACACGTTTTCAGACGATGATGAAGATCAAAATGCTTGTTTGGAGGAAATTAAAAGTGTCAAGGCAGACGATGAACGTAACAGTCTTATTGTAGGACCTAACATTGGATCTGATGAAGACAAAATTGACGATCACTTACAAGAAAATAGCTCCGAGCCAGAAAATATCCATGACGCATCCCAAACCGCAGTAACCGATGTAAATTCAAAAGAAACCAGCTACAAATGTTTAAAGTGTAACGTGTATTTTCTTAATCAAGTAGACGTTAAAGCTCACCCCCATGCCCAGTACTTCTGTAAATATTATTGCAAACAATGCCAAAGGCAATTTAACACAAAAGGTGGATTTATAGTTCATGTCTTACAACACGATATGACCAAAGTCTCTAGGCTTTCCTATCGGTGCAACAAATGTCCCTTCTCTTTCGATGATTGTTACAAATTAAAACGGCACTATAGTACTGTACATAGTAGCGAAAACCAAAATACTGCCAAGTATGCTGAAAGTATTGTGCACAATAGAGGCGACATACAAGCAGATGTTGATAATTGTAGCGCAACTATTTCAGGTGATATAGAAGGAGATCCAAGTTCTGTATCATCTGATAATTCCAATGACGCAACGTTGGAAAACGTTGAAAGAATAAATTCTAAGAATCCTATTACAGGCAGTATACCAATATTTGACTGTGATGTATGTTACGATGTGTTTGCTTCCGACAAGGCATTGAATCGGCACAAAATGTTGCACCTCGAATTAGAAAAAACAATAGACAGTAATGTTTCAATTCTTATTGACGATGatgaaattcaatttatacaGAAAGACGACATATCTGATAAACATCAAATTGTGTCAAACTTCATTACATCTCCGAAACCCTCTTTACCAAATTTTATTGCCACGCCAATGGCGCAATTAACTCCTATAAGGACTGCCAATGTGCAAACATCCAAACCAAATATATTAACTAAAGAACCAATGTCAAAACAGGAAAGTCCTGTACAAAGCACCGTCAGCGTCGATTTAACAACCGATAAAAGAAAACTGACGTCAGACATAACTGAAATGCTGACAGGCAAGAAATCGTTGCCAAAAGTGGAAATTCCAAGATATACATCGTATAAGAAGACGTACAAGACGGTTGTTAAAAGTCAGCCAAAGGTGGGTAGCAACCAACTACCCTTAAAAATGCCGGAGTTACAACCAATAACAAAGGATCTTGCTTCTCCCAAAAATACTGAAAAAACTTTACCCGTTGATACTTCTACGATGGTTTCCGAAACCGACAAGCCTAAGTATATGTACATTTTATGTCCCCCAAACATTAACCAATCTCTAGGAATTCCTTTTGGTGGACAAGCCTTACTGGCGATTGATTCTAACTCCACCATGACAAATTCAACTGccggttttgtttttaaaaatcaaggtGAAACAAATACTATCCCAACGATGCCCGGATCTGGAGTACCCaatcaatttattattaatcaGCAGATTAACACTGGAGGCGTTGTTATCAATCCACAGACAAGCGGTGTTTCAGGAAATAGTTTGGTGTTCAACCAACCACAAAATCTTCAAAGCCAAACACCTAGTGTACAAGAATCGCAAAATCTTCAATCCCTTAGTGGAGTACAGGGAGCTGAAGGAGGGCAAATGTTTTATATTGTAATGCCTCCCAATCAAGATACATCAGCTAATCCAAACGTACAGTTACCTCCCACTCCACAGCCTCAGATACAGTCCAATCAACAACCTGTAAAACAGCTAACGGTTGTGTCGAAAAAGGACattgttaaaaataagaattttgcaAAGTGGAAAGTGGACAGGAAGAAAACGAATATGGGAAAAGACTTTAAAAAGCGGTTAAGCCCTGATAAATTTTTAAGCcccgattttaataaaacatcgaATACTAACGTAACAGTTGTAACACCAGATATTACTACTATAGATGATTCTAACTCCTCTGAGTCTGTTATAACAAATTTATTACCAGGGGAAACTACAGAGGAAGAAAATGGCCGTATCCTTAAGAAGGCGCTGAGTGGTGATAGCGAATTCATAATGCCCATTATTACCAGCATTGGTACTGTTGCTGAAGTTTCTACAAAtgtaaaagaaaaagttcgcaAAGATCCTGTATCGGTATACGAAAGTGAGTTTGCAAAGTTTCTTAACCAAACCGAGGAGACAAAGCAATCCGACGACAATAAAAGCCGAAATCAGGAACGGGCTATTATAAACGAAGCCATAAAATCTCTACGAATGTCTAAAAATCGCAAACCAGTATCTTCCAAATTGTCAGGTGATTCTAAGGACGATGATATTATTTTTCTTGATGATGACTCGTCAAGTAATGAAACACACGAATCAAAGAAACCTCAACTTAATGCTGGCACACAAAGTAAAGAAGATACACAAccaaaaccaaaaatatttgtCAAAAAGCTTAGCGACTTGCTAAGCTCGTCCCAGCCGACAATGCAAGACCTTCAAGTATCAGAAAATTTAACGAGTTCATCTTTccaacactgttgtttgcgctGTAATATTCAGTTAAAAGATTGGCTTCTCTACAACGATCACCTATATTCAGCCTTTCACATTGATTCCCTGCCCCACAATCTTCAACTTATGGAATCCTTCGATTGTCAAAAATCGACGGAAAATATTCCTGCAAGTTCAGTTGTGGATCAACTTAATGTTTCGGATGAGCTCCTGAACCTTTTATCGACTGAAGAGGAATGCACCGCCATTTTAAACAACATTGCGAGTAACGAACAATTTCAACGGTTGATAAACACTGAaagtgattttgtcaaaaatactgATATACAACCTTTAATCGGAGAAAAAACAATAACTCCAGACAACACGCCAGCAGTCGATGAAAGACCTCAAGGCTTTAAATGTGATATTTGCGGCAGAGTGTGCACAACCAAAAAGTTACTGAAAAAACATCTAATGCGACATAACGAGGAACGAAATGTACCCTGCAAAGTTTGTGGGAAATTTTTCAGATTTAACTACGAAGTCTCTGCTCACGCAAGGTCTCACGAAAAACCTACGTTTCAATGTGATATCTGCCCAAAAATGTTCATCCACAAATCCCATTTAACTGTCcatagaaaaaaacatttaaacgaCTTTTCCGCTTTTTGTGATATCTGCAGCAAAGGGTTTATATCACAAGCACAATGTACTAATCACAAGAGATCTCAACATGATAATCAAGGTCATATTTGCGATACTTGTGGGAACAAACTATGCAGTGCTTCGGCTTTAAAGGCACACATGCGTATTCATAGCACGAATCAAGTTAAAAAGCACATTTGTGAGATATGTGGTAAAAACTATGTTACACGTAAAAGTCTTAAGGGTCATGTAATGAACGTTCACTCGCGAAATAAACCTTACGTGTGTAATATTTGTGGCAAATCTGTGAGTAGCAAAAGTATTCTCGAAACCCATCTGAAACTTCACACGGGTCTTAAggattatttttgtaatatttgtaataaatcgTTCGCTTCCCAGGAGTACCTGAATGTGCATCAAAGAACCCATACCGGACATAAACCATTCCAGTGTCACCTTTGTCCTaaaaattttactcaaaaaacgtctCTTACAGTACATTTGAGGTATCATACTGGGGAGAGACCATATAAATGTGAatgtggaaaaaattttactacaAAAAGTCACTTAATGACTCATTATAGAACTCATGACATAGGTGGAGTCGAAATTGAATATTTGAATTATCAGTTACATGACTCTCTATAG
Protein Sequence: MTRREKHKFIRKHFWRECRVVLTDVKKNKYYKRLQEKKDAISEVSHGRKKHSCYICFEKFYTKEDLAAHKFVHFCEKSNNTFSDDDEDQNACLEEIKSVKADDERNSLIVGPNIGSDEDKIDDHLQENSSEPENIHDASQTAVTDVNSKETSYKCLKCNVYFLNQVDVKAHPHAQYFCKYYCKQCQRQFNTKGGFIVHVLQHDMTKVSRLSYRCNKCPFSFDDCYKLKRHYSTVHSSENQNTAKYAESIVHNRGDIQADVDNCSATISGDIEGDPSSVSSDNSNDATLENVERINSKNPITGSIPIFDCDVCYDVFASDKALNRHKMLHLELEKTIDSNVSILIDDDEIQFIQKDDISDKHQIVSNFITSPKPSLPNFIATPMAQLTPIRTANVQTSKPNILTKEPMSKQESPVQSTVSVDLTTDKRKLTSDITEMLTGKKSLPKVEIPRYTSYKKTYKTVVKSQPKVGSNQLPLKMPELQPITKDLASPKNTEKTLPVDTSTMVSETDKPKYMYILCPPNINQSLGIPFGGQALLAIDSNSTMTNSTAGFVFKNQGETNTIPTMPGSGVPNQFIINQQINTGGVVINPQTSGVSGNSLVFNQPQNLQSQTPSVQESQNLQSLSGVQGAEGGQMFYIVMPPNQDTSANPNVQLPPTPQPQIQSNQQPVKQLTVVSKKDIVKNKNFAKWKVDRKKTNMGKDFKKRLSPDKFLSPDFNKTSNTNVTVVTPDITTIDDSNSSESVITNLLPGETTEEENGRILKKALSGDSEFIMPIITSIGTVAEVSTNVKEKVRKDPVSVYESEFAKFLNQTEETKQSDDNKSRNQERAIINEAIKSLRMSKNRKPVSSKLSGDSKDDDIIFLDDDSSSNETHESKKPQLNAGTQSKEDTQPKPKIFVKKLSDLLSSSQPTMQDLQVSENLTSSSFQHCCLRCNIQLKDWLLYNDHLYSAFHIDSLPHNLQLMESFDCQKSTENIPASSVVDQLNVSDELLNLLSTEEECTAILNNIASNEQFQRLINTESDFVKNTDIQPLIGEKTITPDNTPAVDERPQGFKCDICGRVCTTKKLLKKHLMRHNEERNVPCKVCGKFFRFNYEVSAHARSHEKPTFQCDICPKMFIHKSHLTVHRKKHLNDFSAFCDICSKGFISQAQCTNHKRSQHDNQGHICDTCGNKLCSASALKAHMRIHSTNQVKKHICEICGKNYVTRKSLKGHVMNVHSRNKPYVCNICGKSVSSKSILETHLKLHTGLKDYFCNICNKSFASQEYLNVHQRTHTGHKPFQCHLCPKNFTQKTSLTVHLRYHTGERPYKCECGKNFTTKSHLMTHYRTHDIGGVEIEYLNYQLHDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -