Ppte051081.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- zfy1_1
- Assembly
- GCA_963969555.1
- Location
- OZ018380.1:12598020-12601035[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00029 0.054 16.1 0.9 1 23 10 33 10 33 0.97 2 18 0.043 8 9.3 0.8 2 23 40 62 39 62 0.95 3 18 0.00083 0.15 14.6 0.4 1 23 69 94 69 94 0.96 4 18 0.0022 0.41 13.3 5.6 1 23 101 123 101 123 0.98 5 18 0.0087 1.6 11.4 0.8 5 23 132 150 130 150 0.95 6 18 0.019 3.5 10.4 7.6 1 23 166 188 166 189 0.95 7 18 0.00064 0.12 15.0 0.3 2 21 305 324 304 325 0.93 8 18 0.04 7.4 9.4 2.2 2 23 338 360 337 360 0.94 9 18 0.00094 0.17 14.5 1.1 3 23 396 417 394 417 0.95 10 18 0.039 7.3 9.4 0.3 1 23 425 450 425 450 0.94 11 18 8.3e-06 0.0015 20.9 0.6 2 23 461 483 460 483 0.95 12 18 0.00025 0.046 16.3 0.7 5 23 491 510 489 510 0.94 13 18 0.00062 0.11 15.0 0.7 1 23 517 540 517 540 0.94 14 18 0.0066 1.2 11.8 0.8 2 23 547 569 546 569 0.95 15 18 0.035 6.5 9.5 0.1 2 22 577 599 576 601 0.87 16 18 5.7e-06 0.0011 21.5 2.6 2 23 609 630 608 630 0.96 17 18 9.5e-05 0.018 17.6 0.1 1 22 637 658 637 658 0.96 18 18 0.0025 0.47 13.1 1.1 1 23 665 687 665 687 0.95
Sequence Information
- Coding Sequence
- ATGGTCCATGAGAACAAGGGAGTTCAGTACCCTTGTGACGTTTGTGGCAAGAATTTCTCTACGAAATACCGAGCCGAGTACCACAAGAAGACTATTCACCTTAAAGACTTCAACCTCCATTGTGAGCAGTGCGGAAGAGGTTTCCTGTATCTCACAGGACTCACGACTCACGTCCGAAAAGTTCACGATAAGGAGGTGAATATTTTTGTATGCAATGTAGAAAGCTGTAAAAGAAACTTTCGTTCCAACGCCGCACTGCAATACCATTTACAGACAGGTCATTCCCAGAAGAAGATCGAGTATGTATGCAACCAATGCCAGAAGGCCTTCCATCATATTTCCttatataaaaggcatttaaGTAGACACACGAACACTAAGAGGTACCCGTGTTTATGCGGAAACCAATATACTTCCAAGCATAGTTTGGAAGTTCACATCCGATCCCATACGGGGGATGGTAATTCTAAAAAAGCATATCTCGGCAGGGAAgttttccattgtcctgattgCAATcaatgtttttacaaaaaaaaaatcctctACGAGCATATGAGAGTCCATCATTTTGACGGCACAAATGTTACTTTTTCAGATAATTACGAAGACATTTTTAACCAAAGAATAATCGACATTACCGATCACGTCAGAGATACCCATAAATCTGTAGATGTTGCAaggatttctgaaaaaatttgcgatgtcgaaaaaggtttttcttgCGAGAAAAATAGCTTTAACGACTGTATTAGATTTGAACATAAAAATACCATTAGCAATGTTAATGGCACAAGTATTAGTGAAGTTGAAGATACAAATGAAATGATAAAACACTTTCCTTGTTCCTGCGCTAATTGCGAAAAGAAAAAAGACAGTGTACCCATTCCTGAATATACAGGTACAGGGCTTTTGAAATGTCCGGACTGTGAACAAATATTTGGTAGTaagcacaatttttttaatcatattattatggaaTCCATGGACATAGGTATAAATGACGAAGCGATTACTTGTAAAGAATGTGAACAAGTATTTAAGACATACTGTATTTTGAATAAGCACATTAGCAATACGCACAAAgtaatggaaaatgttaaagaGTGCGCCGTTTGTGGCATGAACTATAAAGGTTCGTTGGAAGATCACAATAACTTGTTACACCTTGAACctttttgtacattttgtacaATTTGCCACAAAGGATTTTATGCTCTGGAAGATTTGCAGAAACACATGGTTAAAGACCATAAATTACGTGAGATCATCCGTTTTCCGTGCACCGAGGACGGGTGCGTAAAATTCTTTACCAACAGAAACGCTTTTTTGTACCACTTAGGTACAGTACACTTGAAGGCGAAATTTAAGGCTTCCTGTGAAGAATGTGGAAAGTGCGGAAAAGTGTTTTCCAAGAAGCGATACCTCACCAATCACCTGAACTACGTTCATAAACTAAAGCCACAAAAAAAGATATGCGACAAAAGCTTTACTAGAAACTTTACCTTAAAAGATCATATTACTAAGGTTCACAGGGGCATCGTGGAGTTCCATCAATGCGACATATGTggagaaaaatttaaaggaaaacaaaacatcgaaaatcataaaaacgctgtacatttaaaaaaatccaatattcACTGCGAGTTTTGTGGTAAAGGTTTTCTTTATGAGAGTGGTTTAAACCAACACATTAAAAGTACTCACGAAGAACGAGTCACCATTATTCCATGTCCTGAAGAAGGATGcgtaaaaacatttaaaacgaaaGAAGTCTTAAAGTATCATAAAGACGCTGCACACTCCAAAGTAAAACTTAAGCTAATTTGTGAACAATGTGGTAAAACATTCACGCATCCTTTTCTCTACACAAAACATATGAGATTTCACAGAAAATGCCCGTCGATGTATCCGTGTAGTATTTGTGATAAAGTTGTGACGAGTCTAGGAAGTTTTAAAGATCATATGCGTAGTCGCACCGGGGAAAGGCCCTTTATTTGTGAACAGTGCGGACAAGGGTTCCATGCTAAGAAACATCTGCGAGCTCATGTCGTGGTGCACACCAAGGGTGTAAGATCTGTAATAAAAGGTTTTCACAAAGGGGAACCTTGA
- Protein Sequence
- MVHENKGVQYPCDVCGKNFSTKYRAEYHKKTIHLKDFNLHCEQCGRGFLYLTGLTTHVRKVHDKEVNIFVCNVESCKRNFRSNAALQYHLQTGHSQKKIEYVCNQCQKAFHHISLYKRHLSRHTNTKRYPCLCGNQYTSKHSLEVHIRSHTGDGNSKKAYLGREVFHCPDCNQCFYKKKILYEHMRVHHFDGTNVTFSDNYEDIFNQRIIDITDHVRDTHKSVDVARISEKICDVEKGFSCEKNSFNDCIRFEHKNTISNVNGTSISEVEDTNEMIKHFPCSCANCEKKKDSVPIPEYTGTGLLKCPDCEQIFGSKHNFFNHIIMESMDIGINDEAITCKECEQVFKTYCILNKHISNTHKVMENVKECAVCGMNYKGSLEDHNNLLHLEPFCTFCTICHKGFYALEDLQKHMVKDHKLREIIRFPCTEDGCVKFFTNRNAFLYHLGTVHLKAKFKASCEECGKCGKVFSKKRYLTNHLNYVHKLKPQKKICDKSFTRNFTLKDHITKVHRGIVEFHQCDICGEKFKGKQNIENHKNAVHLKKSNIHCEFCGKGFLYESGLNQHIKSTHEERVTIIPCPEEGCVKTFKTKEVLKYHKDAAHSKVKLKLICEQCGKTFTHPFLYTKHMRFHRKCPSMYPCSICDKVVTSLGSFKDHMRSRTGERPFICEQCGQGFHAKKHLRAHVVVHTKGVRSVIKGFHKGEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -