Ppte051043.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018380.1:12347021-12363158[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 7.7e-06 0.0014 21.0 0.2 1 23 228 250 228 250 0.97 2 30 0.5 93 5.9 4.7 1 23 338 361 338 361 0.92 3 30 0.00036 0.067 15.8 2.1 1 23 371 393 371 393 0.98 4 30 0.001 0.19 14.4 1.0 3 23 400 420 399 420 0.98 5 30 0.00045 0.085 15.5 1.6 1 23 426 448 426 448 0.97 6 30 1.8e-06 0.00033 23.0 0.4 1 23 454 476 454 476 0.98 7 30 0.017 3.1 10.5 0.1 3 22 484 503 482 503 0.95 8 30 0.76 1.4e+02 5.3 0.8 1 23 623 646 623 646 0.96 9 30 0.069 13 8.6 0.2 1 23 653 675 653 675 0.96 10 30 0.29 55 6.6 1.1 1 23 679 703 679 703 0.92 11 30 0.0025 0.47 13.1 0.2 2 23 710 731 710 731 0.97 12 30 0.019 3.6 10.3 2.9 1 23 737 760 737 760 0.93 13 30 8e-05 0.015 17.8 0.3 1 20 771 790 771 791 0.96 14 30 1.6e-05 0.0029 20.1 3.7 2 23 803 824 803 824 0.98 15 30 2.7e-05 0.0051 19.3 3.6 1 23 830 852 830 852 0.97 16 30 1.9 3.5e+02 4.1 0.8 2 18 950 963 950 969 0.70 17 30 0.35 65 6.4 0.8 3 12 983 992 982 1001 0.84 18 30 8.1 1.5e+03 2.1 3.8 1 23 1005 1027 1005 1027 0.96 19 30 0.016 2.9 10.6 0.2 1 19 1032 1050 1032 1052 0.96 20 30 0.48 89 5.9 2.3 1 21 1058 1078 1058 1079 0.91 21 30 2.8e-05 0.0052 19.3 3.6 1 23 1086 1108 1086 1108 0.98 22 30 6.1 1.1e+03 2.5 0.2 3 12 1280 1289 1279 1297 0.83 23 30 0.017 3.2 10.5 0.7 1 23 1301 1323 1301 1323 0.97 24 30 0.12 22 7.9 1.0 1 23 1329 1351 1329 1351 0.95 25 30 0.5 94 5.9 0.2 1 23 1355 1379 1355 1379 0.77 26 30 5.5 1e+03 2.6 1.0 2 23 1386 1407 1385 1407 0.86 27 30 0.0036 0.66 12.6 4.2 1 23 1413 1436 1413 1436 0.92 28 30 0.00083 0.15 14.6 1.8 1 20 1447 1466 1447 1467 0.96 29 30 2.7e-05 0.005 19.3 1.2 2 23 1479 1500 1478 1500 0.98 30 30 1.6e-06 0.00029 23.2 1.6 1 23 1506 1528 1506 1528 0.98
Sequence Information
- Coding Sequence
- ATGGAGCAACCCAAGACATGTCCAATAACATTCTTTACACCGATAGTAGAAATTGCGGAAGCCCCACCTCAACAAGAAATACAAACCAAAGACAAGacgaaaaataaagaaaaaaaacaagaCTTGGTTGAAATAAAAGACGAAATCGAAGAAATAATAGTTAAAGAAGAGGacgaaaatgagatttcaggagaaaaaaatcagaaaataaatataaaagccGAAGACGAAAAACAAGATACCAAAGATGAAGACGTTAAAGTTAAAGTTGAACCGAAACAGGAAGCAAATACCAAAGATGTAGAAGAAGTACAAAACAAAAGAAAGCGCGGTAGACCCAAGAAATCAAACGCAAGTCAGGCAGTTAGGAAAAGTCAGAGAACCTATAATAAGAAAGTCAAAGTTGATGTTGATGTTGAGGAGCcggttaaaaaagaaaagaagccTAGAAAGCCTAGAAAACAACGCTCACCAAAGAAAAAACCACTTGAAACAGACGTAATTGACGTAAAATTTGAGGATGAACTTTTGATATCTCCTGAACATCTAGATGAAAACAAGGTCATAAAATGCCCCATTTGCAAGGATGAAAGAGAGTGGAACCTGAAAGATGTAAAAGAGCATTACAAAAAAGACCATCCAGGCAAGAGGCTTAGAACCTCCAGGTTCTTTGGAGACCTCCATCCTTGTGATATATGTggtaaagaatttaaaagtgcAGGAAGCTTAAGAGACCACGTGGAGACACACAGCAACTACTTTTATTGCGACATTTGCAATCATTCAAcgaaaaaaattttagatcataTACTACACCTTAGAATCCATCACCACATGGGTATATTTCAGTGCTTAATGTGTGAATTTAGCACTTTGGAGATAACTAAGATAAACGATCATGTGAATCACCACGACGATTTGTTAAAGTACTGGTGTGATTCCTGCAAAAAGTCCTTTCAAATCCTACAGCATTTTCAGGAGCACGATAATTACCATACAGGCCTAAAGCCCTTTGACTGTGAGTTTTGTGGAAAGTGCTTTTTGTATTCCCGATATCTCCACGCGCATAAAATTAACATGCATAAGGAAGAGATGAATTGTCCGAGCACTTACGAATGCGTCATCTGCAATAAGATTTATCAGCATAGAAATAGTTTGAAGCTTCACATGAATTCGCACACAGGGAATTTTGCGATCTGCGATATTTGCGGAAAGACGTTGTCGAGTAAGGAGAAATTGAAGTTTCATTTGAGAACGCATACTGGATACAAACCTTACAGttgCCAATACTGCGGAAAATGCTTTACCAAAAAACCGATCCTAGTCGAACACGTTCGAGTTCACACGGGCGAAAAACCCTACATTTGTGATTATTGTACCAAAGGGTTCTCTCAGAGAAGCAGCTTAGTGATTCACATGAGAGGCCATACCGGCGAGAAGCCCTACGGATGCCAATTTTGTGGCAAAGGATTCGTAGCCAAGGCTATGTTGAatattcatttgaaaacttgtAAGGGCTACTTTCAGGTTCCTAAAActgaACAAGGCCAGGTTTGCTTGAAAGTAGAGGAAGATGAAGAAgaaattttaatacattttatagATGACGACGACGATAACATTGATAATGAAGATTGTGATGATAATGATGACGAATATCAAGAATATTATAATGTTGTCAATGTAAAAGACGAGCCTTTGAACGTCATAAACGCAGAACAACCTCTTCAAATTCTAGGTTCCCGAGAACCggtaaaaactgttaaaaaaacaGAAGACGAATCAAAacttataaagaaatatctatgCAACATCTGCGGATGTTATTTTCAGCTTATAAGACGCCACCTTGAAAGTCACGGTCCCCATAACTGCATGGAGTGTCTCACTAATTTTAAAACAGAAGAATTGTACGGTGAACACCTGATGACCGTCCACGATAACGGTGGTGAACGATACCCTTGCGACCTTTGTTCTTTAACATTTTCTTCCGTAACCACAATGGCTGTACATAGGTTTATCCATACCAGACAATACAGCTGTCCTCTTTGTAATTTTACAACCAAAGGAAGATCTAGATACTCGTTGGTGAACCACATAAAGAGGCACGAAGGGAATTTTTCGGAGAGGTGCGAGATTTGTGGTCGAGGGTTTATGGACAAAAATATGATGGCTTATCATATGGAAATGCATGAAGCTATTCCGAAATATGAGTGCGAGTTTTGCAAGAAGAAATTTACagtaaaaagGTACTTGGATGTCCATAAAAGTTACAACCACAAAATGGAAATGTATGGGATAGAGGAGATGTATCAATGCGAGGTGTGTGGACGAAGCTTCACTTTCGAAAAAAGTTTAGTTCGACATTTGAGCTGTATTCATAAAATTGGAAAGGATAGAACGAGAGAATGCCCGGTGTGTCACAAAATCATTTCCAACAACCATAACCTCACGAAGCACATGCGCACCCACACCGGGGAAAAAAGGTTCTGCTGCGACAGTTGTGGGAAAGCGTTTTCGGAGAAAAAGTACCTCAATAAGCACCAGCGCGTCCATTTGAAGCAAAGAATGAGAAATCCCGAATCGCAGGAAGTAGAAAGCGATGAAGATAGCTATTTCGTCAAAGAAACGGTACATAAAGAAGTTGCTGGTCCATCTGAAGACTGCAATAAGATTAGTGCGGACGATGAGGTTGAGGAGTATAGGATTGAAGATGACGATGAAGAAAAAGGTGGACTACAATTTATTGTTGATACGGCACCGCCAGTGCTCGAGACCCCCAGATTCGATCTTACAGAACCAAAGATCAAGATCGCATCGAACGTTGTACTTACTCCAAAGTCAGAAGTCTGCCCGGTATGCggaaaaactgttaaatatttgaaacaGCATTTTAGGTTCCAACATCAAGGTGCCAAACGAACCGAGAGGAACCATTCCGGATTGTGTCCTATTTGCGGCAAGTTTTTTAAACACGTTGCTTATCACATGTCCAAAACTCACAAGGAAGAGTTTTGTTGTGATCAGTGTTGCGCTATCTTTAAGTCGCAGGAGCTTTTGGACGAACACAAACAAATGCATACTAGTGATCACTATAGATGCGACAATTGCACTATGGTCTTTAAGAGCCTTACGGACTTAGCCATTCACAACTATTGTCATACCAACACGTACGCTTGTCCCAAATGCAATACCATATGTAAATCGAGACAATCTCTGAAATTCCACGTAAGAAAAGAAGAGGAGAGTTTCAACTATCACTGTCACATTTGTGGACGAGGATTTGTCCAGCAACACCTTCTACAAGTTCACATCGAGCGGCACGAGAACGTCAAGAAGTCATCTAAGTTACTAAGTGCCATTCTAATAATTCCTAAAAATTCctcaaaatcacaaaaaatcACTCAAAGAAAAAAAGCTTCAAACTGCAAAATAAAGGACGTGATTGGAAAAAAAGTAAAGGTGGCTTTGTTGAGAACAAgaacaaagaaaaaacttaTCAGGAAGAAAAGAAAAGAGACTTGGAGTTCCGACGATGATGATTGGGTCATTGGGAAGGATTCGGAATTACATAAAGAAAATAGTTTAAGGTCGAGAAAAAACTCTCGTAAATGCAAACAAAACGCAATGGAAAAATCGGTACTGGAAAAATTATCCCTTAAACTAAATGAAGAACTACATACAGAAGCGAGTATTAAGGATGAAAGTGATTGGTCGGAGGTGGAATCCGATTGGGTAATAGACACAGATACAGACGAACACACAGGAACAGGAAAGAAAAAATCAACGGACGACACAAGTCTGcaaaataaacgaaaacaaGACAAATCCGGACTTTGTCCTCAGTGCGGAAAAGTCGTTTCTGACATTAGAGGACACACGAAAAGTCACGCGAATGTATTTTCCTGTGAtctatgttttataaactttaaaaacgagaaGCTTTTAAACGAACATAAAGAAGTACACGAATCGGAAAACCCTTACAATTGTGACAGGTGCAAtatgatatttaaaaatgttactaAGTTAGCATTACATAGGTTTCTACATACGGGAAGTTATACTTGTCCTATATGTGGATTTGTAGCTACGAGTAAATTTAGAAACTCTATTATAGCACACATTAAAAGACACGAAGACAACTACGCAGTAAGATGCGAAATTTGTAACAGAGGATTCCTGTGCAAGAAGAAATTAGAGGAACACATAGAGTGGCATGAAAACATTCCCAAATACAAATGCGAACTCTGTCACAAAAAATTCCCCGTAAAGTCTTATCTGACACTTCACAATAAGTTCAATCACAAAAAGGAACTTTATGGTACGGAGGAGATATTTCAGTGCGAACTTTGCGGAAGAAAGTTTACGTTTGAAAAGAGTTTTAAAAGACATTTGAGCTGTATTCACAGAGTTGGAAAAGATTTGACAGTAAAGTGTCAAATATGTGGTAAACTAATCGCCAACAATCACAACTTGAAGAAGCACATGCGAGTTCATACCGGAGAGAAAAACTACAGTTGTGACGTGTGCGGGAAAACATTTTCTCAGAAACAGTACGTCACTAGACACCAGAAGGTGCATCAACCGGATAGAGAGGGCAAGAAACGTTCTGCTGGAGATCTAGCTCAATACAAAATTGAGCCTCTGGTATAG
- Protein Sequence
- MEQPKTCPITFFTPIVEIAEAPPQQEIQTKDKTKNKEKKQDLVEIKDEIEEIIVKEEDENEISGEKNQKINIKAEDEKQDTKDEDVKVKVEPKQEANTKDVEEVQNKRKRGRPKKSNASQAVRKSQRTYNKKVKVDVDVEEPVKKEKKPRKPRKQRSPKKKPLETDVIDVKFEDELLISPEHLDENKVIKCPICKDEREWNLKDVKEHYKKDHPGKRLRTSRFFGDLHPCDICGKEFKSAGSLRDHVETHSNYFYCDICNHSTKKILDHILHLRIHHHMGIFQCLMCEFSTLEITKINDHVNHHDDLLKYWCDSCKKSFQILQHFQEHDNYHTGLKPFDCEFCGKCFLYSRYLHAHKINMHKEEMNCPSTYECVICNKIYQHRNSLKLHMNSHTGNFAICDICGKTLSSKEKLKFHLRTHTGYKPYSCQYCGKCFTKKPILVEHVRVHTGEKPYICDYCTKGFSQRSSLVIHMRGHTGEKPYGCQFCGKGFVAKAMLNIHLKTCKGYFQVPKTEQGQVCLKVEEDEEEILIHFIDDDDDNIDNEDCDDNDDEYQEYYNVVNVKDEPLNVINAEQPLQILGSREPVKTVKKTEDESKLIKKYLCNICGCYFQLIRRHLESHGPHNCMECLTNFKTEELYGEHLMTVHDNGGERYPCDLCSLTFSSVTTMAVHRFIHTRQYSCPLCNFTTKGRSRYSLVNHIKRHEGNFSERCEICGRGFMDKNMMAYHMEMHEAIPKYECEFCKKKFTVKRYLDVHKSYNHKMEMYGIEEMYQCEVCGRSFTFEKSLVRHLSCIHKIGKDRTRECPVCHKIISNNHNLTKHMRTHTGEKRFCCDSCGKAFSEKKYLNKHQRVHLKQRMRNPESQEVESDEDSYFVKETVHKEVAGPSEDCNKISADDEVEEYRIEDDDEEKGGLQFIVDTAPPVLETPRFDLTEPKIKIASNVVLTPKSEVCPVCGKTVKYLKQHFRFQHQGAKRTERNHSGLCPICGKFFKHVAYHMSKTHKEEFCCDQCCAIFKSQELLDEHKQMHTSDHYRCDNCTMVFKSLTDLAIHNYCHTNTYACPKCNTICKSRQSLKFHVRKEEESFNYHCHICGRGFVQQHLLQVHIERHENVKKSSKLLSAILIIPKNSSKSQKITQRKKASNCKIKDVIGKKVKVALLRTRTKKKLIRKKRKETWSSDDDDWVIGKDSELHKENSLRSRKNSRKCKQNAMEKSVLEKLSLKLNEELHTEASIKDESDWSEVESDWVIDTDTDEHTGTGKKKSTDDTSLQNKRKQDKSGLCPQCGKVVSDIRGHTKSHANVFSCDLCFINFKNEKLLNEHKEVHESENPYNCDRCNMIFKNVTKLALHRFLHTGSYTCPICGFVATSKFRNSIIAHIKRHEDNYAVRCEICNRGFLCKKKLEEHIEWHENIPKYKCELCHKKFPVKSYLTLHNKFNHKKELYGTEEIFQCELCGRKFTFEKSFKRHLSCIHRVGKDLTVKCQICGKLIANNHNLKKHMRVHTGEKNYSCDVCGKTFSQKQYVTRHQKVHQPDREGKKRSAGDLAQYKIEPLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -