Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: -
Assembly: GCA_963969555.1
Location: OZ018380.1:12256523-12268893[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 8.1e-05 0.015 17.8 0.4 2 23 110 131 109 131 0.97

2 33 0.28 52 6.7 0.1 1 23 151 174 151 174 0.93

3 33 0.011 2 11.2 2.6 1 23 178 200 178 201 0.93

4 33 0.036 6.7 9.5 0.1 3 23 208 229 206 229 0.95

5 33 0.016 2.9 10.6 2.5 1 23 235 257 235 257 0.95

6 33 0.011 2.1 11.1 0.9 1 23 263 286 263 286 0.95

7 33 0.0018 0.34 13.6 0.2 2 23 298 320 297 320 0.93

8 33 9.9e-05 0.018 17.5 1.1 3 23 332 352 330 352 0.96

9 33 0.00018 0.034 16.7 3.1 1 23 358 380 358 380 0.97

10 33 7e-06 0.0013 21.2 0.7 1 23 386 408 386 408 0.98

11 33 0.032 6 9.6 0.6 1 20 414 433 414 434 0.95

12 33 0.2 37 7.1 0.9 1 22 463 484 463 485 0.80

13 33 8.1 1.5e+03 2.1 1.3 2 23 492 516 491 516 0.72

14 33 0.00096 0.18 14.4 2.3 1 23 522 545 522 545 0.96

15 33 0.0013 0.24 14.0 0.9 1 22 551 572 551 574 0.91

16 33 0.017 3.1 10.5 1.0 3 23 587 608 586 608 0.94

17 33 5.5e-05 0.01 18.4 0.2 1 23 619 641 619 641 0.97

18 33 0.044 8.2 9.2 2.0 1 23 647 669 647 669 0.93

19 33 0.89 1.7e+02 5.1 1.7 1 13 675 687 675 689 0.89

20 33 0.4 75 6.2 0.8 1 23 703 725 703 725 0.89

21 33 2.5e-05 0.0046 19.4 0.6 1 23 740 762 740 762 0.98

22 33 1.2 2.2e+02 4.7 5.6 2 23 765 786 764 786 0.95

23 33 5.2 9.6e+02 2.7 0.4 3 23 794 815 793 815 0.91

24 33 0.0038 0.7 12.6 0.9 2 23 927 948 926 948 0.96

25 33 0.028 5.3 9.8 0.2 1 23 966 988 966 988 0.97

26 33 0.34 64 6.4 0.0 1 23 990 1012 990 1012 0.96

27 33 0.022 4.1 10.2 0.1 2 23 1052 1074 1051 1074 0.96

28 33 0.032 6 9.6 0.6 1 23 1080 1103 1080 1103 0.94

29 33 0.024 4.4 10.1 0.2 2 21 1115 1134 1114 1135 0.92

30 33 0.00018 0.033 16.7 1.8 1 23 1150 1172 1150 1172 0.98

31 33 0.093 17 8.2 0.4 1 23 1178 1200 1178 1200 0.90

32 33 3.7e-06 0.00069 22.0 2.0 1 23 1206 1228 1206 1228 0.97

33 33 2.6e-05 0.0048 19.4 0.6 1 21 1238 1258 1238 1259 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	8.1e-05	0.015	17.8	0.4	2	23	110	131	109	131	0.97
2	33	0.28	52	6.7	0.1	1	23	151	174	151	174	0.93
3	33	0.011	2	11.2	2.6	1	23	178	200	178	201	0.93
4	33	0.036	6.7	9.5	0.1	3	23	208	229	206	229	0.95
5	33	0.016	2.9	10.6	2.5	1	23	235	257	235	257	0.95
6	33	0.011	2.1	11.1	0.9	1	23	263	286	263	286	0.95
7	33	0.0018	0.34	13.6	0.2	2	23	298	320	297	320	0.93
8	33	9.9e-05	0.018	17.5	1.1	3	23	332	352	330	352	0.96
9	33	0.00018	0.034	16.7	3.1	1	23	358	380	358	380	0.97
10	33	7e-06	0.0013	21.2	0.7	1	23	386	408	386	408	0.98
11	33	0.032	6	9.6	0.6	1	20	414	433	414	434	0.95
12	33	0.2	37	7.1	0.9	1	22	463	484	463	485	0.80
13	33	8.1	1.5e+03	2.1	1.3	2	23	492	516	491	516	0.72
14	33	0.00096	0.18	14.4	2.3	1	23	522	545	522	545	0.96
15	33	0.0013	0.24	14.0	0.9	1	22	551	572	551	574	0.91
16	33	0.017	3.1	10.5	1.0	3	23	587	608	586	608	0.94
17	33	5.5e-05	0.01	18.4	0.2	1	23	619	641	619	641	0.97
18	33	0.044	8.2	9.2	2.0	1	23	647	669	647	669	0.93
19	33	0.89	1.7e+02	5.1	1.7	1	13	675	687	675	689	0.89
20	33	0.4	75	6.2	0.8	1	23	703	725	703	725	0.89
21	33	2.5e-05	0.0046	19.4	0.6	1	23	740	762	740	762	0.98
22	33	1.2	2.2e+02	4.7	5.6	2	23	765	786	764	786	0.95
23	33	5.2	9.6e+02	2.7	0.4	3	23	794	815	793	815	0.91
24	33	0.0038	0.7	12.6	0.9	2	23	927	948	926	948	0.96
25	33	0.028	5.3	9.8	0.2	1	23	966	988	966	988	0.97
26	33	0.34	64	6.4	0.0	1	23	990	1012	990	1012	0.96
27	33	0.022	4.1	10.2	0.1	2	23	1052	1074	1051	1074	0.96
28	33	0.032	6	9.6	0.6	1	23	1080	1103	1080	1103	0.94
29	33	0.024	4.4	10.1	0.2	2	21	1115	1134	1114	1135	0.92
30	33	0.00018	0.033	16.7	1.8	1	23	1150	1172	1150	1172	0.98
31	33	0.093	17	8.2	0.4	1	23	1178	1200	1178	1200	0.90
32	33	3.7e-06	0.00069	22.0	2.0	1	23	1206	1228	1206	1228	0.97
33	33	2.6e-05	0.0048	19.4	0.6	1	21	1238	1258	1238	1259	0.95

Sequence Information

Coding Sequence: ATGTGCATGGATATAAAGATAAACAGatatcaAAGTAAGATAAGACCTAAAATACCAAAACCAGTATCCGAAAGGAGAACTTTGAAATACTCAGATTGTGACTGTGATACCGACGACATTCCACTGAGAAAAATGAACTTAAGAAAAAGCACTGTAACAGCTTCAGACAATAATACAATAGATATAAAAGAAGAACGGCTTGTTCTTAATTATTCTTTAGATAGCGAAAGTGATTTCGAACCTCCGAAACCCAAAAAACGGTTAAAACTTAAAAGCAAAGTTACCAAAACCAAGGGGAAACGAAAATACAATTCTGCCAAGAATTGGGAGTGTAAAAAATGTCAAGAGGTATTTGTTACTTTAAGCCTGTTACGAGATCATCGTAAAATTCACAGAAAAAAGGACCTAACGGAAAAGCATACTTACAAATACGACGTGCTTCAAGATCTGTATATTTGCAATACTTGTTCTGCAGAATTTCAAGATGAAACGGAAGTTAAAAATCACATAGAAGATCTCCACGAAAAGGAATATTCTTGTACACAATGCGAAAAGAGTTTTAAAACATTGTATGAGATGGGATCGCATTCGGGAACGCACCATCCCGAAGGACACGTTAACTGTCCTCTGTGTAATTACAAGACTCCGAAGAAAGGGGCTCTTTTGATTCATATAAACTATGTCCACCTGAAGAAATTCGCCTATTTTTGTCAGAAATGTGGAAAAGGCTTTAACGACCATCTTCTATTTAAGGAGCATGAAAATGAACACTTGGGTGTGAGACCGTTCAGTTGTGTGGTCTGTGGAAATAGTTTCACTTATACCAGATATTTGTATACTCACCAAGTGCGAGCGCATAGAGTACCCATTGACGGGCAACGACTACCGAACCAATGTCCCTATTGTAGTAGAAAATACAGCAAACCCGAGACGTTGGGAAGGCATCTGGAAGAAGCCCATTTTAAATCGGGACCCCACGAGAAAAAGCACCTTTGTGATACCTGCGGTAAAGGTTTTGCCCAACGAAGTAAACTGGTTATTCATAAACGAGTTCATACAGGCTACAAACCTTATGCGTGCAGATACTGCGAGAAATGCTTTACCAAAAAAGACTATCTTGTAATGCACGAGAGAGTCCACAGCGGCGAAAAGCCTTACTCGTGCGAGTACTGTGGAAAGTGCTTTAGCCAAGGAGCGCCGCTTAGGATTCACTTGAGGATTCATACCGGGGAAAAGCCATATCAATGTCAGTTTTGTTTAATGCGATTTACTTCTAGGGGAgctttaaatttacataaaaattgctCAGCAATAAATAACTGCAATTCTTGCATACTGGTATTTCAAAACGAGACTGATATAATGTCCCATGTTGCTTCCCATTCCTTTCAGTGCCCTGTGTGTCAAGAGAAATTTTCCAAAGCTATTTTTCTTGGATGTCACATGGCGGAACATAATACAGATGGTACTGTTTCCTGCCCTCTTTGTCAGTACCAGTACAGTACTCCATATGGTAACGTCCTGCAGACACACATCAAAAGGAGACATCTTAAAATGGGCTGTCACTATTGTGAACATTGTGGCGCATCGTATTACAAGAAAAAGCAGCTGTTGGAACATATTAATGTTGTTCATCTCAAGCAGGAACCATATAAGTGCGTAGTATGTGATAAGGAATTCATAATGAAGACCAGTTTGTACAAGCATCAAGTTGATAAGCATAAGGTACTTGTTGAAGGCGATATACCATCAAATTATTGCCTTTTGTGCAAGAGAACTTTTCAAAAAGTTTCCTCCCTTGAGAAACACTTGGAAGTGAAGCATAGTCagataaaatgtaaaaaagaaGAAACTTTTGTTTGCGACTTGTGCGGTAAAGCCTTCGGCTATCGCCAGAGCCTTAAGGTTCATTTGAAAGGTCATGCTGGTATACGACCTCATACGTGTTCATTTTGCCCCAAAACTTTTAAACTTAACTCTCAAAAACTTGACCACGAGGCTGTCCATACAAATTTAAGGCCATTTTCGTGCGAGCAGTGCGGACAAAGATTCAAGAAACGGCGAAAAGGACGACCAAAAAAAGTAAAGCAGCCCGATGAACCAGATTTTTCTTGTCCAGAATGTCCAAAAATATCTGCTTCCCAACGTTTAGCCAATCTACACAAACATTTTCATTACGAAGAGTCCTCTTACACCTTTGACAAGTCAAAGCGTGCCTTTACCTGTAATTTTTGCTCTAAAGTATTTATTGATAAGAGTGATATGGAAGAGCATATGGACTCCCATGCAATGAGCTGCAAGCAGTGTCACCAATGCTTCCAACATCCATTTTTCCTTGGTTTGCATATGGCGGAACATAACTCTAAAGAGCAAGTTTTTTGCCCTCTTTGTAACTATCGCGGAACGTCAGTTTTGCcgttaaaaaaacatatttttaatacccATTTCGGAGATGAGACCGATGAAATTAAGTCTGAGGAAATAAATATAGATGACGATGACATGCCCTTAAAACCCAAGGAAACTATTACCAAAAAAGCTAAGTCGGATGATGATGACGATGATTATGATAATgaatatgatgatgatgaggACTATTGGCCTGAAAAACCTAAACAAATttgcaccaaaaaaaaattacccaaTGACGCCCACGCtcctgaaaagaaaaaaaaatatatctataaaaaagcaaacataagcaaaaaattgctGGAGAGGCTTAGAAGAGAAAAGCAGACTTTAAAGAAAAGGGCACAAAGGGCCAAGACTCAACTAATATGTAAAATATGTAAGGTTAAATATCCTACCTTTAAAGATCTCAGGAACCACAGAAAAGTGCACAAAGCGGAAAGACAGGAATCCCTTTACACGTACAATCCTCTAAGAAAATCTTACACTTGTGACACTTGTTTACAAGAGTTTATTCAAGAGGACGATGTAAAAAAACACGCTGAAAGTCACACTTATTCGTGCACCGTTTGCCCTGCAATATACAAAAAAGCCTTGCTCTTAGGACTACACATGGCTGAGCATAACGATGAATCAAAATTAAGTTGTCCTTTATGCAACCATGAGTATAAGTCGCATTGTAAGAGTCGACTCATAAGACATATTAAACAGACTCACCaaaaagaaaaacctaaaaCAAGTCAATGCGAGTATTGCGGATCCTCTTACTTATCGAAGAGCATGCTGGAAGATCACATTAGCGTCGTACATCTGCAGAATGAGCCTTTCAAGTGCATTGTTTGTGGCAATTCATTTACCTTACAATCAAGTATGCGCATACATCAAATAAATAAGCATAGGGTTGTGGACGAGAGCGAACTATCGTCCACGTATTGTTTGCTCTGtaaaatggaatttaaaaaGCCAGAATCCTTGGAAAAGCATTTGGAGATGAAACGCTGTATACCCATACCGAGAGTGGAGAGGCAAGGACATTTCGTTTGCGACCTTTGTGGCAAAGAATTTCGATTTTACAAGTCCTTTAACCTCCATCAACGAGAACATGCGGGCGATAAGCCTTTCAAATGCTCTTTCTGTCCCAAGGCTTTTGTAATCAACTCAAAAAGACTAGCTCATGAGGTATCTCACACGGATTTGAGACCTTTCTCTTGTGAGACTTGTGGACAAAGTTATAAGACTTGGAAGCATTTACGAAGACATTTAGCTGTTCACAATAGTGGAAATAACCCTAACGTGACATATAATTGTTCTTCTTGttataaatcgttttctactaAGGATACTTTGAGGGCGCACATAAGAATTTGTGCTAGACCTAAACCACCTCCCCAGTGTTATTGA
Protein Sequence: MCMDIKINRYQSKIRPKIPKPVSERRTLKYSDCDCDTDDIPLRKMNLRKSTVTASDNNTIDIKEERLVLNYSLDSESDFEPPKPKKRLKLKSKVTKTKGKRKYNSAKNWECKKCQEVFVTLSLLRDHRKIHRKKDLTEKHTYKYDVLQDLYICNTCSAEFQDETEVKNHIEDLHEKEYSCTQCEKSFKTLYEMGSHSGTHHPEGHVNCPLCNYKTPKKGALLIHINYVHLKKFAYFCQKCGKGFNDHLLFKEHENEHLGVRPFSCVVCGNSFTYTRYLYTHQVRAHRVPIDGQRLPNQCPYCSRKYSKPETLGRHLEEAHFKSGPHEKKHLCDTCGKGFAQRSKLVIHKRVHTGYKPYACRYCEKCFTKKDYLVMHERVHSGEKPYSCEYCGKCFSQGAPLRIHLRIHTGEKPYQCQFCLMRFTSRGALNLHKNCSAINNCNSCILVFQNETDIMSHVASHSFQCPVCQEKFSKAIFLGCHMAEHNTDGTVSCPLCQYQYSTPYGNVLQTHIKRRHLKMGCHYCEHCGASYYKKKQLLEHINVVHLKQEPYKCVVCDKEFIMKTSLYKHQVDKHKVLVEGDIPSNYCLLCKRTFQKVSSLEKHLEVKHSQIKCKKEETFVCDLCGKAFGYRQSLKVHLKGHAGIRPHTCSFCPKTFKLNSQKLDHEAVHTNLRPFSCEQCGQRFKKRRKGRPKKVKQPDEPDFSCPECPKISASQRLANLHKHFHYEESSYTFDKSKRAFTCNFCSKVFIDKSDMEEHMDSHAMSCKQCHQCFQHPFFLGLHMAEHNSKEQVFCPLCNYRGTSVLPLKKHIFNTHFGDETDEIKSEEINIDDDDMPLKPKETITKKAKSDDDDDDYDNEYDDDEDYWPEKPKQICTKKKLPNDAHAPEKKKKYIYKKANISKKLLERLRREKQTLKKRAQRAKTQLICKICKVKYPTFKDLRNHRKVHKAERQESLYTYNPLRKSYTCDTCLQEFIQEDDVKKHAESHTYSCTVCPAIYKKALLLGLHMAEHNDESKLSCPLCNHEYKSHCKSRLIRHIKQTHQKEKPKTSQCEYCGSSYLSKSMLEDHISVVHLQNEPFKCIVCGNSFTLQSSMRIHQINKHRVVDESELSSTYCLLCKMEFKKPESLEKHLEMKRCIPIPRVERQGHFVCDLCGKEFRFYKSFNLHQREHAGDKPFKCSFCPKAFVINSKRLAHEVSHTDLRPFSCETCGQSYKTWKHLRRHLAVHNSGNNPNVTYNCSSCYKSFSTKDTLRAHIRICARPKPPPQCY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -