Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: zfh1
Assembly: GCA_963969555.1
Location: OZ018380.1:12648162-12659107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 3.6 6.7e+02 3.2 0.1 2 13 12 23 12 28 0.87

2 26 0.00087 0.16 14.6 5.9 1 23 36 58 36 58 0.98

3 26 0.0094 1.7 11.3 0.2 1 23 67 90 67 90 0.97

4 26 0.0027 0.51 13.0 3.4 1 23 96 119 96 119 0.96

5 26 4.5 8.3e+02 2.9 2.1 1 16 127 144 127 145 0.87

6 26 1.1e-05 0.002 20.6 0.9 2 23 205 227 204 227 0.94

7 26 0.02 3.6 10.3 0.2 2 23 234 256 233 256 0.93

8 26 0.0047 0.87 12.3 0.5 1 23 265 288 265 288 0.96

9 26 0.00037 0.068 15.8 0.6 1 23 294 317 294 317 0.96

10 26 0.0041 0.77 12.4 0.0 2 23 325 349 324 349 0.93

11 26 0.0029 0.53 12.9 1.8 2 23 357 378 356 378 0.94

12 26 0.00033 0.062 15.9 0.1 1 23 385 407 385 407 0.98

13 26 0.021 3.9 10.2 0.1 1 23 413 435 413 435 0.95

14 26 7.8e-05 0.015 17.9 0.6 1 23 441 464 441 464 0.95

15 26 0.02 3.6 10.3 0.0 2 23 493 517 492 517 0.93

16 26 0.00069 0.13 14.9 0.2 1 23 551 573 551 573 0.96

17 26 8.7e-05 0.016 17.7 3.6 2 23 580 602 579 602 0.94

18 26 4.6e-06 0.00086 21.7 1.6 3 23 665 686 664 686 0.97

19 26 0.0015 0.28 13.8 0.4 2 23 693 715 692 715 0.95

20 26 0.007 1.3 11.7 0.2 1 23 724 747 724 747 0.96

21 26 0.00036 0.067 15.8 0.5 1 23 753 776 753 776 0.96

22 26 0.0041 0.77 12.4 0.0 2 23 784 808 783 808 0.93

23 26 0.0029 0.53 12.9 1.8 2 23 816 837 815 837 0.94

24 26 0.0013 0.24 14.0 0.1 1 23 844 866 844 866 0.98

25 26 0.021 3.9 10.2 0.1 1 23 872 894 872 894 0.95

26 26 7.8e-05 0.015 17.9 0.6 1 23 900 923 900 923 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	3.6	6.7e+02	3.2	0.1	2	13	12	23	12	28	0.87
2	26	0.00087	0.16	14.6	5.9	1	23	36	58	36	58	0.98
3	26	0.0094	1.7	11.3	0.2	1	23	67	90	67	90	0.97
4	26	0.0027	0.51	13.0	3.4	1	23	96	119	96	119	0.96
5	26	4.5	8.3e+02	2.9	2.1	1	16	127	144	127	145	0.87
6	26	1.1e-05	0.002	20.6	0.9	2	23	205	227	204	227	0.94
7	26	0.02	3.6	10.3	0.2	2	23	234	256	233	256	0.93
8	26	0.0047	0.87	12.3	0.5	1	23	265	288	265	288	0.96
9	26	0.00037	0.068	15.8	0.6	1	23	294	317	294	317	0.96
10	26	0.0041	0.77	12.4	0.0	2	23	325	349	324	349	0.93
11	26	0.0029	0.53	12.9	1.8	2	23	357	378	356	378	0.94
12	26	0.00033	0.062	15.9	0.1	1	23	385	407	385	407	0.98
13	26	0.021	3.9	10.2	0.1	1	23	413	435	413	435	0.95
14	26	7.8e-05	0.015	17.9	0.6	1	23	441	464	441	464	0.95
15	26	0.02	3.6	10.3	0.0	2	23	493	517	492	517	0.93
16	26	0.00069	0.13	14.9	0.2	1	23	551	573	551	573	0.96
17	26	8.7e-05	0.016	17.7	3.6	2	23	580	602	579	602	0.94
18	26	4.6e-06	0.00086	21.7	1.6	3	23	665	686	664	686	0.97
19	26	0.0015	0.28	13.8	0.4	2	23	693	715	692	715	0.95
20	26	0.007	1.3	11.7	0.2	1	23	724	747	724	747	0.96
21	26	0.00036	0.067	15.8	0.5	1	23	753	776	753	776	0.96
22	26	0.0041	0.77	12.4	0.0	2	23	784	808	783	808	0.93
23	26	0.0029	0.53	12.9	1.8	2	23	816	837	815	837	0.94
24	26	0.0013	0.24	14.0	0.1	1	23	844	866	844	866	0.98
25	26	0.021	3.9	10.2	0.1	1	23	872	894	872	894	0.95
26	26	7.8e-05	0.015	17.9	0.6	1	23	900	923	900	923	0.95

Sequence Information

Coding Sequence: ATGCGAGAGACATATCATAACATAATTCTCGAAGTCTGCCCCGTTTGTGGAATTACAACTAAGCGTctgaaaaaacaaatgattcGTCACGAGGAAAATCGCAAGTACTCTTGTGACTTTTGTGGCAAGACTTTTAAATACGATTCGTGCTATAATAGACACAAGAAAGTACATACTAAAGAAGCCACCCACAGatGTTTTCCATGTGAAGTTTGCGGCATTGTTTTTCTAGACAAGAAAACTGTGGAAAATCACAAAAGAAAAATTCACCTCAACGATTTTCAATACTGTTGCGAACAGTGCGGCAGAGCATTCGTTTGTAAAGGCCAGTTAAACCGCCATGTCAAAATAACTCATGAGCAGCAAGTGAtgactttatttttttgtgattttaaccAGTGCAAAGAGACATTTACTAATAAAGCCACCTTTCGCTTTAAACCAAACGAGAAGTGGATTGCGATCAAATGTGCTGAAGGTGACCTGTATATTAAATTACATGATTTAGTAATATCTCCTCAGCAAGAAAACATTTCTCAAATTAAAATCACAGCTGCTGGGTACAACAGAGAAAAAGAAACACttataaaaacggagaaaaaagaGAAAATGCCGTGTCCACAATGCGGCAAATCATTTGGCACAAGAAGACATCTTAATCAGCATGTAAAACTTATTCACGAACGTGCGGAAAAGTCTTACTGCACGGATTGCGGGAAACTGTATTTATCTAAAGCATCCTTGAAAAAACACGTTGACATAATTCATCGAGGTATTCGaagtattaataattttagatGTGGCTTCTGTGGCGAAAAGTATTCAACTGATTACGGCTTACAATTGCACAAAATTAAAATCCAcggtaaaaaacttaaatttatttgtgGTATTTGCAAAAAAGGGTTTATGTACGaaagtaaattaaaacagcATATTTCGAAAGTACATGCAAACAAGGTTCCTACCCTTCCTTGTCCCGAGAAAGGATGTAAAAAGGTGTTTGTAACAAGTGGCGGTTTAGGATACCACATTCGGGCCGAGCATACTGAAAATAAACCTGTGTTTCTTTGTGCACGCTGTGGAAAAACATTCGATCACCCTACTGTGTACCGTAAGCACCTTAATCTTCATAAAATGGGCAAACCCAAATTTAATTGCAGCATTTGCCAAAAAGTGATTACTTCTAAAATAGGTTTAGACGCTCACATGCGTATTCATACAGGAGAAAAGCCTTTTATATGTGAGCAGTGTGGAACAGGTTTTAGAACAATACTTATCCTTACAAGGCATATGGTAGTTCATACTAAGGAGAAACCGTATGCATGTAAATTTTGTGATAAAAGATATACTCAGCCGTCTCCTCTCAGTCGACATGTGAAGCAGATTCATCCAGAACTGATTAAAGGATTTATTTATGAAAGTGCATTAAAACAGCATAATTCGGTAGCACATGGAGACGGGGTTCCTACACTTCCTTGTCCCGAGGAAGGATGTAGCAAGGCGTTTGTAACCACTGGCGTTTTAACATACCACATTCGGGCCGAGCATACTGAAGATAAACCCGAGCTTCTTTGTGCGCATTATGGAAAAACTTTTGACCACCCTACTGTCTACAGTCACATGCGTATTCATACAGGGGAAAAGCCTTTTATTTGTGAGCAGTGCGGAATAAGTTTTAGGACAAGAACTATTCTGAAAGAGCATATGGTTGTTCATACGAAAGAGAAACCATGTGCATGCAAACTTTGTGATAAAAGATATACTCAACCTTCTCCTCTCACTCGACACATGAAACACGTTCATCCAGActttaaacaaaacgAGAAGTGGATTGCGATCAAATGTGCTGAAGGTGACCTGTAtgttaaattaaatgatttagTAATATTTCCTCAGCAAGAAAACATTCCCCAAATTAAAATCACAGCTGCTGGGTACAACAGAGAAAAAGAAACACttataaaaacggagaaaaaagaaaaaatactgtGTCCAGAATGCGGCAAATCATTTGGCAAAAGAAAACATCTTAATCGGCATATAAAACTTATTCACGAACGGGCGGAAAAGTCTTACTGCACGGATTGTGGGAAACTCTTTTTATCTAAAGCATCCTTGAAAAAACACGTTAACATAATTCATCGAGGGATTCGaagtattaataattttagatGTGGCTTCTGTGGTGAACAATATCCAACTGAATACGGCTTACAATTGCACAAAATTAAAATCCAcggtaaaaaacttaaatttatttgtgGTATTTGCAAAAAAGGGTTTATGTACGaaagtaaattaaaacagcATATTTCGAAAGGACATGGAAACAAGGTTCCTACCCTTCCTTGTCCCGAGAAAGGATGTAAAAAGGTGTTTGTAACAAGTGGCGGTTTAGGATACCACATTCGGGCCGAGCATACTGAAAATAAACCTGTGTTTCTTTGTGCACGCTGTGGAAAAACATTCGATCACCCTACTGTGTACCGTAAGCACCTTAATCTTCATAAAATGGGCAAACCCAAATTTAATTGCAGCATTTGCCAAAAAGTGATTACTTCTAAAATAGGTTTAGACGCTCACTTGCGTATTCATACAGGAGAAAAGCCTTTTATATGTGAGCAGTGTGGAACAGGTTTTAGAACAATACTTATCCTTACAAGGCATATGGTAGTTCATACTAAGGATAAACCGTATGCATGTAAATTTTGTGATAAAAGATATACTCAGCCGTCTCCTCTCAGTCGACATGTGAAGCAGATTCATCCAGAACTGATGTAA
Protein Sequence: MRETYHNIILEVCPVCGITTKRLKKQMIRHEENRKYSCDFCGKTFKYDSCYNRHKKVHTKEATHRCFPCEVCGIVFLDKKTVENHKRKIHLNDFQYCCEQCGRAFVCKGQLNRHVKITHEQQVMTLFFCDFNQCKETFTNKATFRFKPNEKWIAIKCAEGDLYIKLHDLVISPQQENISQIKITAAGYNREKETLIKTEKKEKMPCPQCGKSFGTRRHLNQHVKLIHERAEKSYCTDCGKLYLSKASLKKHVDIIHRGIRSINNFRCGFCGEKYSTDYGLQLHKIKIHGKKLKFICGICKKGFMYESKLKQHISKVHANKVPTLPCPEKGCKKVFVTSGGLGYHIRAEHTENKPVFLCARCGKTFDHPTVYRKHLNLHKMGKPKFNCSICQKVITSKIGLDAHMRIHTGEKPFICEQCGTGFRTILILTRHMVVHTKEKPYACKFCDKRYTQPSPLSRHVKQIHPELIKGFIYESALKQHNSVAHGDGVPTLPCPEEGCSKAFVTTGVLTYHIRAEHTEDKPELLCAHYGKTFDHPTVYSHMRIHTGEKPFICEQCGISFRTRTILKEHMVVHTKEKPCACKLCDKRYTQPSPLTRHMKHVHPDFKQNEKWIAIKCAEGDLYVKLNDLVIFPQQENIPQIKITAAGYNREKETLIKTEKKEKILCPECGKSFGKRKHLNRHIKLIHERAEKSYCTDCGKLFLSKASLKKHVNIIHRGIRSINNFRCGFCGEQYPTEYGLQLHKIKIHGKKLKFICGICKKGFMYESKLKQHISKGHGNKVPTLPCPEKGCKKVFVTSGGLGYHIRAEHTENKPVFLCARCGKTFDHPTVYRKHLNLHKMGKPKFNCSICQKVITSKIGLDAHLRIHTGEKPFICEQCGTGFRTILILTRHMVVHTKDKPYACKFCDKRYTQPSPLSRHVKQIHPELM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -