Ppte056669.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018381.1:9679151-9681094[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-07 3.2e-05 25.7 0.1 3 39 14 50 12 54 0.90
Sequence Information
- Coding Sequence
- ATGGTTCCTCGAGGGAAAAAACTTGTACGAGTAGACCGCCAGCGAATGGAAACAGCAGTCAATAGTGTTATTCAAGATAAATTTTCAATTCGTGAAGCAAGCCAAACATATAATATCTCTAAATCAGCCCTACATAGAGCAGTTAAGAGTGCGCTTCACTTTACTGAGCCAAAAAATTTCGAGCATATTCCCAATATTGGAAATAGACGTGTTTTTACAACTCAACAAGAAGCCTCCCTAGTCGAATATCTTATAACGGCCTCGAAAATGTGTTATGGGTTGGGGCATGCAGCGTTAAGGAAACTGGCTTATAAATACGCTAAAGGTCTGAACATAACTTATCCAGAAAAGTGGGATACGGATTTAAAAGCAAGCATCGACTGGCTTAAAGGCTTTAAAAAGCGTCACAAAAAATCTCTGTCATTAAGAAAACCTGAAAAAACTAGCTTATCCCGGGCAACTGCTTTTAATCCAACAACcgttaatagtttttttaataacttagaAAGCGTGATGAACAAATTTCACTTCACACCTGACAATATATACAACTGTGATGAGACCGGTCTTACCACTGTTACAGATCCACCAAAGGTTTTTTCACAAAAAGGACTCAAACAGGTCGGTCAAGCAACATCGGCGGAACGAGGCTCGTTGGTAACCATGTTGACTTTTATAAGTGCAACCGGAAATACAATACCTCCTGTTTTCGTTTTTCCTAGAGTCCATTTTAAGGAGTTTATTGAGTTTATGTTACATGGAGGTCCGACAGGAAGTCTGGGCGTTACAAATAAATCAGGTTGGATGACGGAAATAAACTTTTTAGAAGCTCTCAAACATTTTGTTAAACATTCAAAGCCATCACCAGAGTCTCCTGTTTTACTGCTACTCGATAATCACGAGTCTCATATTAGCTTGAATGTCGTAACCTACGCCAAAAGTAATAATGTGGTCTTACTAACCTTTCCGCCACACACCAGTCACAGACTGCAGCCACTGGATGTGGCCCTTTATGGgccatttaaaacatattttaagagTGCCCAAAATGAGTGGATGTTGTCAAATGCTGGTAAAACACTTAATATATATAACATCGCATCTCTTTCAAATAAAGCTTACATAAATgcttttaatcaaaaaaatattatttcgggTTTTTCCTCAACGGGGATTTATCCCCTAGATCGTAATGTTTTTGACAGTTCCGATTTCTTATGCTCTTCTGTCACAGATCACGATGACCCAACAAAAAAATTGCCATCTAATTCCGCACAACCTGAAGCAGTTCCAAGTACAAGTGGCATTAAAACAGCAGTTACACCCGAAGCTATAAGGCCTTTTCCAAAAGCTCCAGAgagaaaaaacacaaacaataGAGGACGTAAAAAAGGAAGTACAAGAATTTTAACTGACACTGGTGAAAAGAGAATACTTGAAGAAGCACATAACGAAAAGTTACGAAAgatgaatataacaaaaaagagCAACAAAACAGTGAGGAAAATTTTCAACGAAACTAGCAGCAGCGAATCCGAGGATGAGAACATGGAGTTTATTGATACAGACGATGACATATCGGAAAATTTTAATACTGATGAGGATTGCACCTCAGATTTCAGTATTGAAGAAACATCAGTTTTGGAAAAGAATGACTTTGTTCTTGTTGACTGTtccacaaagaaaaataaactatGCTATATAGGACGCATTCAATCAAAATTAGAAAACCAAGAATTGCAAATTAAATTTCTAAGAAGATTTGGTAATTCGAAAAGATTTTATTATCCACTAAAAGACGATATTAGTGACGTTGAAAGAaatcgtgtaaagaaaaagcttCAACCTCCGAACCACAATTGCGGAACCAAAAGATCGCAAGaaataatctatttttccatttcttTTGAGAATTATGAGAAACACTTTGGACGAATCCtttaa
- Protein Sequence
- MVPRGKKLVRVDRQRMETAVNSVIQDKFSIREASQTYNISKSALHRAVKSALHFTEPKNFEHIPNIGNRRVFTTQQEASLVEYLITASKMCYGLGHAALRKLAYKYAKGLNITYPEKWDTDLKASIDWLKGFKKRHKKSLSLRKPEKTSLSRATAFNPTTVNSFFNNLESVMNKFHFTPDNIYNCDETGLTTVTDPPKVFSQKGLKQVGQATSAERGSLVTMLTFISATGNTIPPVFVFPRVHFKEFIEFMLHGGPTGSLGVTNKSGWMTEINFLEALKHFVKHSKPSPESPVLLLLDNHESHISLNVVTYAKSNNVVLLTFPPHTSHRLQPLDVALYGPFKTYFKSAQNEWMLSNAGKTLNIYNIASLSNKAYINAFNQKNIISGFSSTGIYPLDRNVFDSSDFLCSSVTDHDDPTKKLPSNSAQPEAVPSTSGIKTAVTPEAIRPFPKAPERKNTNNRGRKKGSTRILTDTGEKRILEEAHNEKLRKMNITKKSNKTVRKIFNETSSSESEDENMEFIDTDDDISENFNTDEDCTSDFSIEETSVLEKNDFVLVDCSTKKNKLCYIGRIQSKLENQELQIKFLRRFGNSKRFYYPLKDDISDVERNRVKKKLQPPNHNCGTKRSQEIIYFSISFENYEKHFGRIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01240455; iTF_01240453; iTF_01240456; iTF_01240457; iTF_01240477; iTF_01243478; iTF_01240478;
- 90% Identity
- iTF_01240453; iTF_01240455; iTF_01240456; iTF_01240457; iTF_01243478; iTF_01240477; iTF_01240478;
- 80% Identity
- -