Ppte010207.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018375.1:126637616-126639633[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-07 2.9e-05 25.8 0.0 3 41 16 55 14 58 0.92
Sequence Information
- Coding Sequence
- ATGTCGcgttataaaagaaaaactcAACGTCAGTCATGGGATTCAGAAAGCatgaaaaatgcaataattgaaGTCCTAGAGCATAGGATGGGATATAAAAAGGCCTCTCAAAGTTTTAATGTTCCCCAATCAACATTAGAAGATCGTGTCAAAAAAGCAAGAAATGGTAACTCTGTTGAAGAAGCTAGTAAGAAAGGTCTGGGTCGATACAAGACTGTGTTTAGCGTTGCCCAAGAAGATGAGCTAGTTTCGCATATTTTACAAATGGAAAGTAGACTATTCGGATTTACTTTATCAGAACTAAGAATTCTTGCTTACGAACTAGCCGTACAGAATAACATCACCcacaattttaataaagaaaagaaaatggcTGGGAAGTGTTGGCTTTATTCGTTTTTGTCGCGACATCCAAAACTTCGATTGAGAACTCCAGAAGCTACTTCAATTGGACGAGCTATAGGATTTAACCGAGCAGCAGTAGAAAAGTTTTTTACTCTATTAACACAAGTTTATGACCAACACAAGTTTCCTCCTGAGCGCATATGGAATGTTGATGAAACGGGAATTACCACTGTCCCCAACAAGCAGTCTAAAGTTATTTCTATGAGAGGAAAACGACAAATTGGAGCTCGAGGAACCTTGGTTACCGCAGAAATCTGTATGAGCGCAAGTGGTTCCTATATGCCTACAATGCTGATTTTTCCTAGAAAACTTCCCAACGCACAGCTTCTAGACCACACACTTCCTGGAACATTTGCTGAATTCCACCCAAGTGGATGGAtccaaacaaatatttttattaagtggTTTAAAAAGTTCGTCGAGTTTACTAACCCTACATCAGAAAATCCCGTTCTGTTGCTTCTAGATGGACATGCTACGCATACCAAAAGCTTGGAGTTGATAAGTCTGGCCAGAAAAAGTCATGTTGTTATAATATGCTTTCCACCGCATACCACACACAGATTACAACCCCTTGACGTATCATTTATGGCTCCCCTGAACACCTATTATGGGGAAGAAGTAAGAAAATGGATGCGCCAGTATCCTGGAAGACGTATTACAATTTATGAAGTGGGAGAACTCTTTGGTGAAGCTTTTGTTAAATCGGCAGTTATGAAGACTGCAATAAATGGTTTTAGGAAAACTGGAATTTATCCTCTTAATCCTGAAGTTTTTTCTGAGTGGATGTTTGCTCCCTCAGAAACTACGGAGCGAGAACTAAATATACAAGAAAATGGATCTACGCCACCAAATTTGGACAATAATTTAGGCGAAGAACTCGATAAGTCTACTTCATCTACAAAGCCGACAGCTACACAATCATTAGCTCCGTTACCTCCACGCATCGATGCTCCCCAACCAAGCTGTAGCTCTTTAAACTCCCACACTGCAAATTCTACTGACAGCTCTTCATTTTCTAAACAAGCCACCACTAAATCTGACAGTTTACAAGCAACATTCCCAAAATCAATATCTGACTTTTCAGTCTCTCCAAAAGAGGTTTTTCCGATTCCTAGGGCATCGAGGAAGCCGCCCAACGATAACAGAAGAAGAGGCAAGGCTGCTGTAATAACATCATCTCCTTATAAGTCTGAGTTGgaggaaaattttaaaaaatctcccgtcgtaaaaaaattaaagctaaatgaaataaaaggaaaatatgtggtaaaaagggctgctccaaaaaaaaaattggtttcaaAATTACCGATTGCAGTTTCTGATAGTTCGGAGGAAGAAGATGATAATGACGACGCGTGTCTATATTGCAACGAACTATTTTCAAACTCTAAATCAAACGAAGGCTGGGTGAAATGTGGGTCTTGCAACAAATGGGCTCATGAAGCATGTAGTGCCTATGATGATGTAGATGAAGTTTTTATTTGCGACTTTTGTTCatag
- Protein Sequence
- MSRYKRKTQRQSWDSESMKNAIIEVLEHRMGYKKASQSFNVPQSTLEDRVKKARNGNSVEEASKKGLGRYKTVFSVAQEDELVSHILQMESRLFGFTLSELRILAYELAVQNNITHNFNKEKKMAGKCWLYSFLSRHPKLRLRTPEATSIGRAIGFNRAAVEKFFTLLTQVYDQHKFPPERIWNVDETGITTVPNKQSKVISMRGKRQIGARGTLVTAEICMSASGSYMPTMLIFPRKLPNAQLLDHTLPGTFAEFHPSGWIQTNIFIKWFKKFVEFTNPTSENPVLLLLDGHATHTKSLELISLARKSHVVIICFPPHTTHRLQPLDVSFMAPLNTYYGEEVRKWMRQYPGRRITIYEVGELFGEAFVKSAVMKTAINGFRKTGIYPLNPEVFSEWMFAPSETTERELNIQENGSTPPNLDNNLGEELDKSTSSTKPTATQSLAPLPPRIDAPQPSCSSLNSHTANSTDSSSFSKQATTKSDSLQATFPKSISDFSVSPKEVFPIPRASRKPPNDNRRRGKAAVITSSPYKSELEENFKKSPVVKKLKLNEIKGKYVVKRAAPKKKLVSKLPIAVSDSSEEEDDNDDACLYCNELFSNSKSNEGWVKCGSCNKWAHEACSAYDDVDEVFICDFCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01243183;
- 90% Identity
- iTF_01238886; iTF_01238885; iTF_01238832; iTF_01243148; iTF_01240470; iTF_01243183; iTF_01243188; iTF_01240471; iTF_01243127; iTF_01240472; iTF_01243192; iTF_01238845; iTF_01243167;
- 80% Identity
- -