Ppte061669.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018382.1:26424289-26426164[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 1.6e-05 26.7 0.0 1 34 18 51 18 61 0.90
Sequence Information
- Coding Sequence
- ATGCCGAGAGTGTATACGCGTAAATTGGGTGCAAAGCGATTTAAGCAGTATACGGAGGAAACTTTAGAAAAATGTTTAAGTCAAGTTTTAGATGGAAAAATAAGTGCAAATAAGGctgcgaaaaaatataaaattcctaAAGGGACACTAATTAACAAAATGCATGGTCGACACATTAAGAAACATGGAGGCCAAACTGTGTTTTTGGCTGCTGAAGAAACTGACTTTGTCGAAGGACTGGTTACGTGTGCAAAATGGGGTTTTCCCCTTAACACTCTCGATTTACGTTTAAGTGCAAAGGCTTATCTGGATCGCATAGGAAGAGATTCGCGGTTGAAAAAAAACTTACCAGGACCTGATtgggcaaaatcttttttatcgCGCCACAGATACACTTTAGCCGAAAGATTAGGCAACAATATTAAACGATCCCGTGCTGCTGTAGATGTTGACCTGCTATCCTCATTTTTCGACGAACTTTCTAGAACACTTGAGGGAGTTAAACCAGAGGCGATTTTCAATTATGATGAAAGCAACTTGAGTGACGACCCTGGGAAGAAAAAGCTCATTTTTAATAGGGGTGTAAAATATCCAGACAacgttattaattttacaaaaagtgcTGTGACCCTAATGTTGTGCGTTTCTGCAAGCGGTGATATGCTGCCACCATATGTTGTTTATAAGGCGGCGAATTTGTGGGATTCTTGGCGTGAAGGTGGTCCAAGAGGCGCTCCATGTTGCAATAAAAAATGCTGTGCAAAGGGAACCAGGTACAATCGCTCGAATCATGGTTGGTTTGACGCCAATTGTTTTACCGACTGGTTCAAGTCTTCCTTTTTACCCCATGCTAAACTCATAGAAGGAAAGAAGGTTCTACTAGGAGACAATCTTTCTTCCCATTTTACAAAAGAAGTCCTGAAATTGtgcaaagaaaataatatagacTTTGTATGCCTTCCACCAAATGCCACTCACTTGTGCCAGCCACTCGATGTAAGTTTTTTTGGACCTATGAAaggttattggaaaaaaatattacatgacTGGAAAAAGAGCAACCCAACGACTTCTTCAGTTGAAAAGAGTGTGTTTCctaggttattaaaaaaattgtttgatgAATTAGCTCCGGTGGCGTCCAAAAACGCTCGGAGTGGGTTTTATGCCTGTGGAATTTTTCCTTTGTGCAAAAAAAAGCTTCTGGACAAAATCCCTAAAACGACAGACACCCCTAAGCAAGACGGGGTCGGAGAAATATTAGTTGATTATTTAAAAGGCCAACGAAACCCAAACAAGCGCGATTctacaataaaaagaaaaaaattaaatgttgtgCCTGGGCGGTCAGTTGCTTTTGAAGACTCTCCGGAGAAAATcgatgatgataataataactTACCTAGCACCAGTGGAATCctaaatgttaaaagaaaaatctgCGAAGAAAGTGACGAATCAGTCTCCGATGACGAAATAGACAAACCGAATCAATTTATTTTCGAGGACAACATTCAAGAAGAATCCGATAATGGCGATCAACAAATACTAATTGATTCCTGGGTAGTTGTGGAATATCAgactaaaaaaacaaaaaagcattTTGTCGGGCAAATTGCGTCAATCGATAGTTATGAAGCATCAGTTAAGTTTGTCAAACGGTCGAAAAATGACAGATTTGTCTGGCCAAATGTTGACGACATAGATGTTATTTCGCTTcctgacataaaaaaaatattagataacCCCATAGTCTGTCGTAGGGGGCAACTTTTATTTGATATAGACATGACAAGCTTTAATTTTCAATAA
- Protein Sequence
- MPRVYTRKLGAKRFKQYTEETLEKCLSQVLDGKISANKAAKKYKIPKGTLINKMHGRHIKKHGGQTVFLAAEETDFVEGLVTCAKWGFPLNTLDLRLSAKAYLDRIGRDSRLKKNLPGPDWAKSFLSRHRYTLAERLGNNIKRSRAAVDVDLLSSFFDELSRTLEGVKPEAIFNYDESNLSDDPGKKKLIFNRGVKYPDNVINFTKSAVTLMLCVSASGDMLPPYVVYKAANLWDSWREGGPRGAPCCNKKCCAKGTRYNRSNHGWFDANCFTDWFKSSFLPHAKLIEGKKVLLGDNLSSHFTKEVLKLCKENNIDFVCLPPNATHLCQPLDVSFFGPMKGYWKKILHDWKKSNPTTSSVEKSVFPRLLKKLFDELAPVASKNARSGFYACGIFPLCKKKLLDKIPKTTDTPKQDGVGEILVDYLKGQRNPNKRDSTIKRKKLNVVPGRSVAFEDSPEKIDDDNNNLPSTSGILNVKRKICEESDESVSDDEIDKPNQFIFEDNIQEESDNGDQQILIDSWVVVEYQTKKTKKHFVGQIASIDSYEASVKFVKRSKNDRFVWPNVDDIDVISLPDIKKILDNPIVCRRGQLLFDIDMTSFNFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196044; iTF_00196041; iTF_00196043; iTF_00196045; iTF_00196048; iTF_00196119; iTF_00196029; iTF_01238701; iTF_01238704; iTF_01238706; iTF_00196032;
- 90% Identity
- iTF_00196044; iTF_00196045; iTF_00196041; iTF_00196043; iTF_00196119; iTF_00196029; iTF_01238704; iTF_01238706;
- 80% Identity
- -