Ppte048262.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus pterygomalis
Gene Symbol
-
Assembly
GCA_963969555.1
Location
OZ018379.1:74461064-74463494[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-08 8.3e-06 27.6 0.0 1 40 12 50 12 53 0.90

Sequence Information

Coding Sequence
ATGCCTcctcaacaaaaaaaaattttaaggtatactCCACAAGCCATTGCCAATGCAATAGAAGAAGTTAAAAATGGGTGTTCCATAAGAGCAGCAGCAAAAAAATTTGGAGTTCCAAGGATAACATTACTTTATAAAGTTAACGGGAAATTACCAATTGGTAAAAGAATGGGCCCTAAAAGTATTTTTACGAGTGATCAGGAGAATATTCTTGTATCCTGGGTTATCTCCTCTGCCAAGGCTGGGTTTCCAGTTACAAAACAAATGTTTATGACTAACGTAAATAGGTTGGCAAAAGAGTTGGGCATGAAAAAAACCCCTGGTGAAAAATGGTATAAGTTATTTCGGGACCGACATAAAATAATCTCTGatagaatttatcaaactttaACCCGTTCACGTGCAAATGTGACACAAGAGAATATAGTTAACTGGTTTAAAGAGGTATATTCATATATAGAAGGTCAAGGTCtagtaaatgttttaaattgccCTTCGCTCGTATTTAACACCGATGAAACAGCGTTTTACTTAAATCCTAAGAGTGGGAAGGTATTAGCTGCAAAGGGCAGCAAGTCTGTATATCTAGCAGGAGCTAACGACGAAAAAGAAAATGTCACGGTCCTCATGACGGTTAATGCTATAGGACAGATTGCTCCTCCAATGGTTGTTTACCGGTACAAAAGAATTCCTTTACACATAACTGAAGCCGTACCATCCACTTGGGCAATAGGGAGATCTGACACTGGATGGATGACCCAGGAACTTTTTTTTGAGTACttggcaaatattttttatccttGGCTGCTAAAGGAAAACATTGAACGTCCCGTCTTATTTTTTATGGATGGCCATTCATCCCACATATCTCTACATGTGTCCGAATTCTGCGCGAAAACTGGGATTGAACTTATTGCATTATATCCCAATGCAACCCACTTAATGCAACCACTGGACGTTGCTGTGTTTCacagtttaaaaattaagtggAAACGACAGGTTCAAGATTGGAGAATGTCTCATACAGgtgaagaactaaaaaaaaaagatttccCTCCGCTTTTGCAAGAAGCTATTAACGGAATAGAACCTTCTGTAATAGAGAACGGGTTTAGAAAATGTGGGCTAATTCCATGGAACCCCCAGGCAATAACCCTGCCACTTGATGTAAAGCCAATAGGTGTTACACAAGAAAAACAGGATATCAACGAGGTGAAAagatttttacaatatttagagAATGATATTGGCGAAGAAAAAACTTCAGAATTTAAAAGAAATGAAGGTGACTGGTCTGGAGCTGAAAAAGATGTATCTCTCTACAATGTCTGGAGACAAAATCAGGACATAATAAAAGCTGTTCAGttgaatCTGCAACCAAATTCTGCCCTCGAAACGGTAAATGAAAGGGCATTAGAAAATAACGCCCTAGAAGATATGGTCGAGATGTCAACAAAGTCCGAACAAAAATCAGAAGCACCAactgaaaacaaaaaattgaaagACAATGATGAAgaggaaaatataaatattttctcaaTTGCACCTTTAAGCCCTACTACTAATGCTACCAATGTACTTAGACCAGAAGATCCAATAGCGGGCCCATCTAATTTCAGTGCAAATTTAACCCCCAATAAGCAAAGTATTCCAGATAATCAAAGCGCCAAAGCTAATGCAGACCCCGATATTCCTTCTCCATTTAAGCGTGTTTTATTCTGGCCTGAAACAAAACCATCTACCTCTAAGAGAGTAAGAAGAGAAAAGATTCCAGCTGTCCTAACTTCGCCGGAGAAtagactttattttaaaaagaaattggaTGCTAAAAAGCAAAAAACTGATGATCAGTTTCGAAAAAAGAttgaaagagaaaaaaaaaagaaggaaaaagaagaaaaaaaaaatttggacaaGATTAAGCAAAAGTATAAGAAGAGCAAAGGAAGTAAAAGAAATACAGAAGAGGACAGTGACACCACAGCATCAGATTCGTTATCATTTAAAAGCACAGACTCCGAATATGATGAAGATTTTGAGATAACTGAAGAAAATGAGACACCATTGGAAACTGTCACTGCTAAGAGTCTAATGAAGGGTGATTTTGTTCTCTGTGAATTCTTGGGTGGCAAACGGAATCTGACAAAATTTATATATCTATGCATAGTGCAGGTAAAGGGCAAAGATATTCAAGTAATGGGACTAAAATCCACCGACAAATTTAAAAAGGAGTTTGTCCCAAATGAAGACGATGTATCATCTGTAACCATTGAGCAAATTATGGGCAAAGTAGAACCCCCAGAAATTTTAAGTAGAGGCGAACGCATcagttacatttttaagaaAGCCTTACCTGTCAAAGAAATGTAA
Protein Sequence
MPPQQKKILRYTPQAIANAIEEVKNGCSIRAAAKKFGVPRITLLYKVNGKLPIGKRMGPKSIFTSDQENILVSWVISSAKAGFPVTKQMFMTNVNRLAKELGMKKTPGEKWYKLFRDRHKIISDRIYQTLTRSRANVTQENIVNWFKEVYSYIEGQGLVNVLNCPSLVFNTDETAFYLNPKSGKVLAAKGSKSVYLAGANDEKENVTVLMTVNAIGQIAPPMVVYRYKRIPLHITEAVPSTWAIGRSDTGWMTQELFFEYLANIFYPWLLKENIERPVLFFMDGHSSHISLHVSEFCAKTGIELIALYPNATHLMQPLDVAVFHSLKIKWKRQVQDWRMSHTGEELKKKDFPPLLQEAINGIEPSVIENGFRKCGLIPWNPQAITLPLDVKPIGVTQEKQDINEVKRFLQYLENDIGEEKTSEFKRNEGDWSGAEKDVSLYNVWRQNQDIIKAVQLNLQPNSALETVNERALENNALEDMVEMSTKSEQKSEAPTENKKLKDNDEEENINIFSIAPLSPTTNATNVLRPEDPIAGPSNFSANLTPNKQSIPDNQSAKANADPDIPSPFKRVLFWPETKPSTSKRVRREKIPAVLTSPENRLYFKKKLDAKKQKTDDQFRKKIEREKKKKEKEEKKNLDKIKQKYKKSKGSKRNTEEDSDTTASDSLSFKSTDSEYDEDFEITEENETPLETVTAKSLMKGDFVLCEFLGGKRNLTKFIYLCIVQVKGKDIQVMGLKSTDKFKKEFVPNEDDVSSVTIEQIMGKVEPPEILSRGERISYIFKKALPVKEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01240405;
90% Identity
iTF_01240412; iTF_01240420; iTF_01240424; iTF_01240403; iTF_01240404; iTF_01240405; iTF_01238779;
80% Identity
-