Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: -
Assembly: GCA_963969555.1
Location: OZ018381.1:9724155-9725944[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.4e-08 7e-06 27.8 0.0 2 40 16 54 15 56 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.4e-08	7e-06	27.8	0.0	2	40	16	54	15	56	0.92

Sequence Information

Coding Sequence: atGCCCCGTAAATATATTAGGAAAACGAATAAGGCGTCCTGGACTACTGAAGATTTAAATTCAGCATTGGATGCAATAAATAATGGTGTTGCATTGAGGGAAGTATCCAGGCGTTTCAACATTCCTCGAAGTACTTTGCAAGATCGTCGTAGAAACGGAAAAAAGTCCGGCCCATCTCTAGGCAGAAATTCAGTATTCTCTCCCGAAGAAGAAAACGAGTTGGCGGCGCAAATTATTCAACtatcaaaagtattttttggggTAACACCAAGTCAAGTAAAACAGTGTGCTTACGTCTATGCAcaccaaaataatttaaaaaatccttttcaaataaataatgaagCTGCAGGAAGGGATTGGCTTCAAGGTTTTCTGCGTAGAAATCCAGGAATGTCGTTAAGGAAACCAGAAGCTACCAGTATAAATCGAATAACTGCTTTCAACAAAGAAgaagtttccttattttatcaaaatcttgaAAGTTTAATGGAACAATTTAAGTTTTCGGAAGCCAGAATCTTCAATGCAGATGAGACTGGCATCACGACGGTCCAAAGGCCTAATAAAATTTATGCTGAGAAGGGCCAAAAGAGAGTGGGATTCGTAACGAGTTGGGAGAGAGGTAAAACAACAACGGCAATGTGCGCTTTTAGTGCTTCAGAAGATCCCGTGCTACTAGTTTTAGATAATCACGTAAGCCACTGCACGCTAAAAGCGTACAATTTTTGCAAAGAGAACTTTATAATACTTCTTACGATTCCTCCCCATACTTCCCATCGCACACAGCCACTGGATGTATCTTTTTATGCTGCACTTAAAGCTGCCTATAATTCTGAATGTGACAAATATTTGCGTAGTCATCCTGGTGAAAAAATAACCCCAAATGAGATTGCAGAACTTTTCAATCAAGCTTTTGGTCGAGTTGCGACCCCAGAAAAAGCTATAAATGGTTTTAAAGCCACTGGTATATTTCCaatgaataaagatattttttcagaagATGACTTCATGGCTGCTGAAAACTTAAGTTTTGATAGGCACGGAACTCCAGAAGCCTTAAATGATAGGCACGGAACTCCAGAAGCCTTAAATAATATTGTCCAATTAAATCAAAAGGCCAAAATACCCTTCAGAGAAATTATCCCTATTCCTAGTACTTCAAAATCTGAGGGACAACAAAGAAACCATAATCGACAACAGCACTcccaaatatttacaataaccCCCATGAAAGAGATTTTAGAAGAAAGAGAGAAGAAAAAACTTGATAGGCTCGAACCGAAAAGAAAAAGAGTAGAAAAGGTAAAGAAAAGTGTTTTTGGAAATCCTGAACCGAGTCCTGAAGTATCTAATGAAAATAAAGAAGACttgaacaaaaaattgaaaataattaacgTTAGAGAGAAGTCCAAACGAATTAAAACGGATATCAAATATAAAAAGCAGGAAAATTCTTCTGAAAGCGAATCTGGCGATTCGGGCGATGACAAGGAAGTTAACAATGACATATGTATAATTTGTGGAGAATTCGGTAAAAACAATGAGGTTTGGATAAGGTGTGTAGAGTGCGGCGATTGGGCACACAAAGCTTGCTCTGACAATGACAAGAAATCATTTGTATGTGATTTTTGCAAATAG
Protein Sequence: MPRKYIRKTNKASWTTEDLNSALDAINNGVALREVSRRFNIPRSTLQDRRRNGKKSGPSLGRNSVFSPEEENELAAQIIQLSKVFFGVTPSQVKQCAYVYAHQNNLKNPFQINNEAAGRDWLQGFLRRNPGMSLRKPEATSINRITAFNKEEVSLFYQNLESLMEQFKFSEARIFNADETGITTVQRPNKIYAEKGQKRVGFVTSWERGKTTTAMCAFSASEDPVLLVLDNHVSHCTLKAYNFCKENFIILLTIPPHTSHRTQPLDVSFYAALKAAYNSECDKYLRSHPGEKITPNEIAELFNQAFGRVATPEKAINGFKATGIFPMNKDIFSEDDFMAAENLSFDRHGTPEALNDRHGTPEALNNIVQLNQKAKIPFREIIPIPSTSKSEGQQRNHNRQQHSQIFTITPMKEILEEREKKKLDRLEPKRKRVEKVKKSVFGNPEPSPEVSNENKEDLNKKLKIINVREKSKRIKTDIKYKKQENSSESESGDSGDDKEVNNDICIICGEFGKNNEVWIRCVECGDWAHKACSDNDKKSFVCDFCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01240374;
90% Identity: iTF_01242983; iTF_01240385; iTF_01242945; iTF_01242946; iTF_01242947; iTF_01242948; iTF_01242949; iTF_01243173; iTF_01242950; iTF_01242952; iTF_01242953; iTF_01240496; iTF_01242965; iTF_01240374; iTF_01240379; iTF_01241595; iTF_01240381; iTF_01240382; iTF_01242942; iTF_01240383; iTF_01242943; iTF_01240384; iTF_01242955; iTF_01242958; iTF_01240371; iTF_01240378; iTF_01242941; iTF_01240298;
80% Identity: -