Ppte033393.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus pterygomalis
Gene Symbol
-
Assembly
GCA_963969555.1
Location
OZ018377.1:126059629-126073216[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-08 4.6e-06 28.4 0.0 2 41 811 850 810 854 0.93

Sequence Information

Coding Sequence
ATGAGTTCTTTTGCCATTGTCAAGTTTACGGACGAGGAGAAAAACAGAATTGTGCCATGCGGAGACATCAAACATCTAGACCATAACAAcgttaacatgaaaaaaaaatatttggtgaaaTATAATGACGGAAGTTACTATCCCGCCCAGTTAGTGGCCATAAAAGaTTCCATTGAGGAGCTAGAGGCAATGCAGAAAAATAAGCGAATACCGCTTATTAACAAAACCCTTCTGGAAAGTGCAAGTGAAACTGATTCAGATTGTTCTCAAATACCAGAAAAGGCAATCAGACATAAACCAGTTAAAAAGGTAAACCTTTCACagacTGACATAAACCAACAgtctgattttttaaaaatttataaagaatcaTCGGGATTGGGACGAAGAACATGTGAAAatgaagaattaaaaaaaactaataaggaAAATATAGAACTTCAAAAACAAGTTAAAAACCTTGTGCAGAAAAATGAGGAAATCTCCAAGTTAAACATTGAATTACAAAAGACTGTAATAGGTAATGATGGTTTGTCATCAGAAATATTGGAGCCCGAGTCTCATATAACTAAACCTAAACACTCGAGTGATGAGCATGTTTCTACTTACAACACTGGTGGGGATAGTTTTATTGACAATTCTATAAATTTCGATAATAATAttgatgataataatttatataatagtaaTGTTTCCAGTGAGTTTAAGGTATTACAAGGCAACTCTAATGCTCCGTATCAGCAAAAACCCTTAATGTTAAGAGAGGAGTTGTGTTCGTGGGCCATAAAGTATTCTTTAAGTAGAGATGTGTTAAACAAACTTCTTcgcattttaataaaatatggtcATAGTAATGATCTTCCAACTGATGCAAGGACATTACTTCAAACTCCTCGTGCTGAGAATGCTCTTACTTTTATAAACCCAgggtattattttcattttggtATTCAATATTCGCTAATTAATTCTATTAAACAACATTTTCATAGCAATTTCCCCCTAAATATtcagttaaatttaaattttgatggACTACCCATTGCAAAGAGTTCTGGAAGTCAGTTTTGGCCTATTTTAGCCCAAATTCATTCTACTCTTTATTATATGGAGCCTTTTATTATTGGTATTTTTCAAGGCAGTTCTAAACCTTCGAGTCACAATGAATATTTAAAGCCATTTGTAGATGatatgaaattaattttaacagaTGGAATACTTGTCGATGACAAAAGGGTAACTGTTAAAATTAAGTGCATTATTTGTGATGCTCCTGCTCGTGCTTTTGTTTCTGGGGTAAAGGGTCATAATGCTTATTTTGGTTGCTCGAAGTGTATTCAAGAAGGAGAGTATATTGATCATCGAGTGACATATCCTGAAATAAATTCTTCTAGACGAACTGATGAAAGCTTTCTTAAAAAACTTCAGGAAGAACATCATAgagaattttcaattttagaaACTTTAAATATAGGAATGGTTTCTCAACTTCCCCTTGATTATTTACATTTGGTTTGTTTAGGTATAGTTAAAAGGCTTCTCCAATTTTGGACATCAGGCAAAAAAAACATTCGAATGAATAAAGAGCAGATTGATAGGGTTTCAAGTGCTTTACGCTCTGTTTCTCCCCACATTCCAAAGGAATTTAGTAGAAAACCAAGGTCCTTAAAAGATGTCGATAGATGGAAGGGGACTGAATTTCGACAGTTTCTTCTATATACTGGTCCAGTGGTTCTAAAGAACAACTTATCCCCAGAAAAATATCTTCATTTTTTGAGCCTACATGTTGCAGTTAAGATTTTAATAAGCAAAGAACTACACctaaaattaaatgattatgCTCAGTCACTTCTTAACTACTTCGTTACTAATTATTCAACTTTGTATGGGGAAGAACATATAAGTTACAATGTCCATAACTTAGTTCACCTCTGTGAAGATGTTAAAAATCATGGGCCATTAGACGATTTTAGCACATTtccttttgaaaattttttggAAGATGATGCCGTATCAGAAGTTCCATCAACTTGGTTAGAAGGAAACAACCAATGCTGGTGGCCCTTAAAAAAGGACATTAGCAGCCTGATATCCAAGAGTACACCACCAAACAAAATTGATGGAAAATGGAAATTGTATCCTGTACTCATTCTTAATGTATATGAAAATTACAATTTAGCTCGACGCAGAGCCGATGAATTCAGCAGTTCCGAAAATGAAAAGGGAAGAGGATTGAGGAAAAAGAAACAGAAAGCAGTATCGTCTGACACATCTGACATTGACGACAGTGAGGCAGAACATACAAgagAATTAACTCGTCAACTTACTCGGCTTCCAGAGTTTCCACTTTTTGATGGTGTATTTAGTCAATCCAAATACGAtaagATGCCGAGTAAATATAAGAAAACGACTAACAAATGTTCTTGGCAGGAAGAAAATATGAAATCTGCACTAAATGCTGTTCAAAATGGTCATGGACTGAGAGCTTCAGCAAGACACTTTCACGTTCCTGTAACAACTCTTCAAAACAGGGTTAAAAAAGGCGAATATTATAAAGCAAGAATGGGAACACGAACAATATTTAACGAGGAGCAAGAAGAGGACATTGCTCAACAGTTGTTGACTTTAGCCAAAAAATTCTACGGTTTAACGCCACTTCAGTTAAGACGTGCTGTTTTTTTGTTCGCTGAAAAGCTGTCTATTTCTCACAAATTTAATCGAGAAAAACAAGAAGCAGGCAAGGATTGGATGTACGGATTTATGAGGAGACATCCTGAACTCAGCTTCAGGAAACCAGAAGCGACGAGCATTAATCGTATACAGGCTTTCAACAAGGAAGAAATAGGAAGGTTTTTTAAGAATTTAGAggaaattatggaaaaatttaagttttctcCAACTCGCATCTTTAACGTCGATGAAACCGGAATCTCTATAGTCAACAGACCCACAAGAATTGTTGGCCCCAAGGGGCAAAAGCAAATTGGAGCAGCAACTAGTGGCGAAAGGGGAAAAAATATAACAGTGTGCTGTTGCATGAGTGCAAGTGGTTCATTTACTCCTCCACTGTTTATTTATCCGAGAATCAGGATGGCGCCAGCTTTAGAACGGAATGGCCCTCCAGGTTCCATTTATACGTGTACAAAAAGCGGCTGGATGACGGAGGAGGTATTCTTAATCTGGTTAAAACattttgctaaaataaataatgccaCAAAAGACAATCCTGTCTTACTAATTTTAGACAACCATACCAGCCACATATCATTACCAACGTACGAGTTTTGTAAGGAAAATGGCATTATTATGCTCTCAATACCTCCTCACACGTCCCACCGGATTCAACCTTTggatctaacatttttttcttcgCTCAAAAAAGCTTACGACATAGAATGTGAcctatttttgaaaacaaagCCATACCAAAAAATACAAATGACGGATGTTAACGCAATATTTACCAAGGCATACATAAGGGTTTCTAACATGGAAAAGGCGGTAAAGGGATTTGAGAAAGCTGGAATATTTCCAATCGATTCTGGTGTGTTTTGTGATGAAGACTTTTATAGCAACACAAACAATCAACAAGAGCAAATTACTGAACAACTCAGAAATGATTACGAAACAGCTCCGGGCCCTAGTTGTTTAAACCCTGTAGCTGGTTGTTCAAAAGAGCTTAATGTCAGTGTTGAAGTCGTGGTTAATGAAGACATACATAATCAGTCATTCGAGACTGTTGTTCCTTTACCAAAGAAAGTTAATAACAATTCAACACAACAGCAAACCCGACGCAAAAAACAAAGATCTGAGATACTCACATCGACGCCCTTAAAAGCTGTCCTATAA
Protein Sequence
MSSFAIVKFTDEEKNRIVPCGDIKHLDHNNVNMKKKYLVKYNDGSYYPAQLVAIKDSIEELEAMQKNKRIPLINKTLLESASETDSDCSQIPEKAIRHKPVKKVNLSQTDINQQSDFLKIYKESSGLGRRTCENEELKKTNKENIELQKQVKNLVQKNEEISKLNIELQKTVIGNDGLSSEILEPESHITKPKHSSDEHVSTYNTGGDSFIDNSINFDNNIDDNNLYNSNVSSEFKVLQGNSNAPYQQKPLMLREELCSWAIKYSLSRDVLNKLLRILIKYGHSNDLPTDARTLLQTPRAENALTFINPGYYFHFGIQYSLINSIKQHFHSNFPLNIQLNLNFDGLPIAKSSGSQFWPILAQIHSTLYYMEPFIIGIFQGSSKPSSHNEYLKPFVDDMKLILTDGILVDDKRVTVKIKCIICDAPARAFVSGVKGHNAYFGCSKCIQEGEYIDHRVTYPEINSSRRTDESFLKKLQEEHHREFSILETLNIGMVSQLPLDYLHLVCLGIVKRLLQFWTSGKKNIRMNKEQIDRVSSALRSVSPHIPKEFSRKPRSLKDVDRWKGTEFRQFLLYTGPVVLKNNLSPEKYLHFLSLHVAVKILISKELHLKLNDYAQSLLNYFVTNYSTLYGEEHISYNVHNLVHLCEDVKNHGPLDDFSTFPFENFLEDDAVSEVPSTWLEGNNQCWWPLKKDISSLISKSTPPNKIDGKWKLYPVLILNVYENYNLARRRADEFSSSENEKGRGLRKKKQKAVSSDTSDIDDSEAEHTRELTRQLTRLPEFPLFDGVFSQSKYDKMPSKYKKTTNKCSWQEENMKSALNAVQNGHGLRASARHFHVPVTTLQNRVKKGEYYKARMGTRTIFNEEQEEDIAQQLLTLAKKFYGLTPLQLRRAVFLFAEKLSISHKFNREKQEAGKDWMYGFMRRHPELSFRKPEATSINRIQAFNKEEIGRFFKNLEEIMEKFKFSPTRIFNVDETGISIVNRPTRIVGPKGQKQIGAATSGERGKNITVCCCMSASGSFTPPLFIYPRIRMAPALERNGPPGSIYTCTKSGWMTEEVFLIWLKHFAKINNATKDNPVLLILDNHTSHISLPTYEFCKENGIIMLSIPPHTSHRIQPLDLTFFSSLKKAYDIECDLFLKTKPYQKIQMTDVNAIFTKAYIRVSNMEKAVKGFEKAGIFPIDSGVFCDEDFYSNTNNQQEQITEQLRNDYETAPGPSCLNPVAGCSKELNVSVEVVVNEDIHNQSFETVVPLPKKVNNNSTQQQTRRKKQRSEILTSTPLKAVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-