Ppte041076.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus pterygomalis
Gene Symbol
clz9
Assembly
GCA_963969555.1
Location
OZ018378.1:114272302-114277436[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 1.3e-05 26.9 0.0 2 35 16 49 15 51 0.91

Sequence Information

Coding Sequence
atgccaAAGGTccaaaagaacaaaaaataccagaaatccTATACTGAAGCAGACGTTGTTAGAGCCATAGAAGCTGTAAGAAATGGGTTGCCTCAAAGACAGGCTGAACGCGATTACAATGTTCCCAGAGGTACCCTGCAATTCAGAATGGGTGACAAATTTCGGAATAAAACTTCCCTTGGTCCAAGTCCCGTCCTTTCTAATGATGAAGAGAATTGTCTGAAAGATTGGATAGCTGAGTGTCAAAACAAGGGCTTTCCTCTTAGAATTGAAGATATTATGGAGTCTGTGAAGGGTTTTTTAGATGCGAATCCCAGAACAAATGCATTCGTTGATAATCGGCCTGGAAGAGGCTGGTGTAAAGGATTTTTCAAAAGACATCCAGATATATCTCTTAGGTGCCCAGAAGCAATAACAGCTGCAAGTTCTAATATATCCAAAAAGGATATTAAGTCATGGTTTgctgaaattgaaaaatatttaattcgcAAGGGATATAAAGATATTTTGGAAGATAGCTCCCGTGTATTTAATGGAGACGAAACTAGCTTTCTATTGTGCCCTAAAAATAAAAGAGTTGTGGCTGTTAAAGGAAGCAGAAATGTATATGAGATCGATCACAATCCCAAAGTGAACTTGACCGTCATGTTCACGTTTGAAGCATCCGGAAAAGTGACACCTCCCATGATCATATATTCGTATAAAAGATTGCCAGCTGACGTTGCAAAGTCTGTGCCTGATGGATGGGGTATTGGTTGTAGTGATTCGGGCTGGATGAAGAACGATGTATTTTACGAATATAttggaaatgttttttataagtATCTAGTTAAAGAAAATACGCAATTcccgattattttatttgttgatggTCATAAAACGCATTTGACTTACCAAACCAGTCAAATGTGTTGTGATTTGGGCATTATATTAATAGCTTTGTATCCAAACAGCACAAGAATCTTGCAGCCCGCAGATGTTTCAGCATTCCggccattaaaaaataattggaatAAAGCAGTACTTGAATTTAGAAGAGATAACCCGAATGCTGTGGTGACAAAAGAAAACTTTGCTTTTGTGCTTAAAAAAGCTGTCTCCAGTTTGACACCAGAGGTGATTAAAAATGGATTTCGAGCTAAAGGTTTATGGCCATGGAATGCATCGGCTATCGATTATTCGAAATGCTTAGGAAAAACGAAAAATGCTAATGAAGTTTTGGTGGAAAATAAGACCATTCAAGACATTTCTATAACATACCGCGAATTTGCAACTATAGTAggagataaaaaaattaaggaatttGAGGAAGATCCAGAATTTAAGGCAAATAGCAAGGATCAAGACCtggtttttcaaatatatacagtTTTCAAAGATACATTTTGTTCCACTACAAATAACAAACTCACATGCGCAAAAGATAAAAATGGTATTGAaactggtttaaataaaattcccCATATCGTAAAAATTGATATAATTGACAACACTGACTCGAAAACTTTTAACATAGAGGATATTCCAATTGTAACTGAAGATCAGGTAATTCTTGGTACTGCAACATCAAATATAATTCTTACTGACATGCTGCAGCCTGAGCTTTTATTAAGTCATACCATTTCCAATAACGACAACATTTCGGCTGCTGTATCTCAAGCATCGataggaaaatattttatatggcCCACTACACCCGAACGAAAAGgaaaaaaagaaactaaaagGTCGTCTTTCGTTATTACATCTTCAGATCGTAGAAATGAGGAGAGGCAAAAGATTGAGAAGAAACTAGAGGAAGAAAGATTGAAGGAAGAACGGAAACAAAACAGAAAATTGAaaagcttaaataaaaaaaatggtcccaAGAGGAAAGTATCAGCTAAGAAGGAGCAACTAAATAAACGGAAAGCCGAAAAGATAATAAAGCCTGGCTCTAGTCAggaaacagttttaaataatgAAGCAAAGTtgcaaaaaatcaacaaaaacaaAGATGAATCCATTAGAAAGACAGACCTCGAtcaggaagaagaaaaaattacagAAGCAGATCTCATTCCAATCACAGTGTTAAGCAATGGATTAAAGGTGCACTTgcccaaaataataaattataaaataactgAAATGTCTGTTAATTTATGTCAGGAACCCACAGGAGATGCCaacaaacaagacaaaaattaTACCCCAATCTGTGatcaaaataaatccttttCTAGTAGCGAAACTTCATCAGATCCATCAAATATCAATAGAAGTAGCATTGATGAAAAATTTGTACAAGATACTATAAATTACAACAATCAGCAAGCTGGAAATGGTACAAACGTTATTGAAAAGCATGACAATACAGAACCTGTTGAAAATGAAACAGAATACCGTTACCAGAACCCTTTAAGGGGCTACTTGAAAATGGTGCGATTTTACAAAAGAAAGCCAGGAAATCAAAAATATCGAGACTACGATGAAAAATCACTCCAGCGTGAGGTACAATTATATAGACAGGGTGGCAACCTAAGAGATTTAAGGGAACAATTCGATATTCCTTATATAACTGTATACCGAAAAGTTAAGGGTTTGCACACAAAATCGGTTTTTTAG
Protein Sequence
MPKVQKNKKYQKSYTEADVVRAIEAVRNGLPQRQAERDYNVPRGTLQFRMGDKFRNKTSLGPSPVLSNDEENCLKDWIAECQNKGFPLRIEDIMESVKGFLDANPRTNAFVDNRPGRGWCKGFFKRHPDISLRCPEAITAASSNISKKDIKSWFAEIEKYLIRKGYKDILEDSSRVFNGDETSFLLCPKNKRVVAVKGSRNVYEIDHNPKVNLTVMFTFEASGKVTPPMIIYSYKRLPADVAKSVPDGWGIGCSDSGWMKNDVFYEYIGNVFYKYLVKENTQFPIILFVDGHKTHLTYQTSQMCCDLGIILIALYPNSTRILQPADVSAFRPLKNNWNKAVLEFRRDNPNAVVTKENFAFVLKKAVSSLTPEVIKNGFRAKGLWPWNASAIDYSKCLGKTKNANEVLVENKTIQDISITYREFATIVGDKKIKEFEEDPEFKANSKDQDLVFQIYTVFKDTFCSTTNNKLTCAKDKNGIETGLNKIPHIVKIDIIDNTDSKTFNIEDIPIVTEDQVILGTATSNIILTDMLQPELLLSHTISNNDNISAAVSQASIGKYFIWPTTPERKGKKETKRSSFVITSSDRRNEERQKIEKKLEEERLKEERKQNRKLKSLNKKNGPKRKVSAKKEQLNKRKAEKIIKPGSSQETVLNNEAKLQKINKNKDESIRKTDLDQEEEKITEADLIPITVLSNGLKVHLPKIINYKITEMSVNLCQEPTGDANKQDKNYTPICDQNKSFSSSETSSDPSNINRSSIDEKFVQDTINYNNQQAGNGTNVIEKHDNTEPVENETEYRYQNPLRGYLKMVRFYKRKPGNQKYRDYDEKSLQREVQLYRQGGNLRDLREQFDIPYITVYRKVKGLHTKSVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00196066; iTF_01187524; iTF_01187525; iTF_01187526; iTF_01187531; iTF_01240430; iTF_01187509; iTF_00195872;
90% Identity
iTF_01240430; iTF_00195872;
80% Identity
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