Ppte067897.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018383.1:49476581-49478149[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-09 2.6e-07 32.4 0.0 2 40 18 57 17 60 0.92
Sequence Information
- Coding Sequence
- atgcgtatttacgtaaaaaagttgggAAGCAGTTCTTACAAGAACTATACTACCGAGACTTTGGAAAAAGCAGTTCATGAAATTAATGAAAAGAAGATATCACTTAGCAAGGCTTCTAAGAAATACAAGATTCCAAAGGGAACATTAAGCTGCAAGATTAATAAAAAACGGCTTAAATCTGTTGGGAGGCCGCATGCTTTAAGTCAAAAGGAAGAAAGGTTACTGGTAAATGTCCTATTAAAAACTGCTGAATGGGGCTTCTCTTTGACCCATGATGATTTGCGTCATTTAGTGAAGAGACATTTAGATAGTCTAGGCAGAAAAGTGatacaatttaataataatatacctggTATTGATTGgattaaaagttttttgaagCGAAATAGAGAAGTTAGTACAAGAAAGGCACAAAATATTAATCCAAGCAGAGCGGCTGCTACGAGGGAAACTTTTATGAATTATTTTGATAATCTCGAAGAATCTGTAGCAGGTGTACCCTCAAAtctgatatttaattttgacaAGACCAATTTGTCGGACGACCCAGGCTctgttaaatgtttttttaaaagaggGGTAAAATATCCCGAGCGTTTGCTCTCCCATTCCAAATCCAACATTTCCATTATGTTTTGTGGAAGTGCTTCAGGGAACTTGCTTCCACTGTATGTTGTCTATAAGGCAGAAAATTTATGGACGACATGGACCGAAGGAGGTCCTGCCAGAACAAGATACAATCGAACAAGTCATGGTTGGTTCGACTCTGTTACGTTTGCAGATTGGTTTAGATCTGTTTTTCTCCTCTACACGAAACATTACGAAGGACCTAAAGTGCTAATTGGTGATAATTTGGCAAGCCATTTTTGTCCAGAAGTTATCAGACTAGCAGCAGAAAACAATGTGCGTTTCATATGTTTACCTACAAATACTACGCATATTGCACAACCACTCGATGTCTCTGTTTTCGGGCCGTTGAAAAAACAGTGGCGTGCAATACTTTCCGATAACAAATTAACAACGGGTTCAACAGGACTTCCAAAAGAAACATTCCCAAAATTATTGGCTAAACTAATGATTAAATTTTCTGAAACTGGCGAACAAAACCTTATAAGCGGCTTTCGGGCAACAGGCATATACCCCCTAGATCGAAACGAAATATTGAAGAAATTACCCAGAGAGACCGAAGAAACTGAAGAATTTAAAAACGGGTTAAATGATAGTGTtctggattttttaaaaagcatacGCCATAAAAAAGAGTCAAATAGGGCGcccagaaaaaataaaataaaggtaaaacCGGGTAAGAGCATAGGACCAGAAGACTTCGAATTAGGGGAAAGTTCTGGGGCCCCAACTAAACAAAGAAGAAACTCTCCTGATATATTGTCTGATAGCGATTCTGATGCAGAAATTGTGCTTCAAGACGAGTCCGACTGCGACCAAGAAACATTTTTTGCAGAACTGCGTGAAGAGGAGAACTTGGAGGAAACAGAGATGGTAACCAGCACTGTAAATATTAACGATTATGCGCTTGTTAGATTCGCTATTCCAAAGTCTGAGTAA
- Protein Sequence
- MRIYVKKLGSSSYKNYTTETLEKAVHEINEKKISLSKASKKYKIPKGTLSCKINKKRLKSVGRPHALSQKEERLLVNVLLKTAEWGFSLTHDDLRHLVKRHLDSLGRKVIQFNNNIPGIDWIKSFLKRNREVSTRKAQNINPSRAAATRETFMNYFDNLEESVAGVPSNLIFNFDKTNLSDDPGSVKCFFKRGVKYPERLLSHSKSNISIMFCGSASGNLLPLYVVYKAENLWTTWTEGGPARTRYNRTSHGWFDSVTFADWFRSVFLLYTKHYEGPKVLIGDNLASHFCPEVIRLAAENNVRFICLPTNTTHIAQPLDVSVFGPLKKQWRAILSDNKLTTGSTGLPKETFPKLLAKLMIKFSETGEQNLISGFRATGIYPLDRNEILKKLPRETEETEEFKNGLNDSVLDFLKSIRHKKESNRAPRKNKIKVKPGKSIGPEDFELGESSGAPTKQRRNSPDILSDSDSDAEIVLQDESDCDQETFFAELREEENLEETEMVTSTVNINDYALVRFAIPKSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242209;
- 90% Identity
- iTF_01242247; iTF_01240143; iTF_01242250; iTF_01242217; iTF_01242390; iTF_01240114;
- 80% Identity
- -