Ppte008072.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- clz9
- Assembly
- GCA_963969555.1
- Location
- OZ018375.1:100382175-100384328[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-10 5.1e-08 34.6 0.0 2 40 19 57 18 62 0.93
Sequence Information
- Coding Sequence
- ATGGTTCGAACATACGTTCGGAAAACCCAAAAAGGGGCAGGATTTAGTTATAGTAGGGAAGACCTAGAAAAAGCTGTTGCTGATGTGCAAAATGGTAATAAAGCAACCAGAGGTGCAGCGATTCACTACAATATCCCTAGAAGCACATTGAAGCATTACGTAAGAGGGACGAGAGGAACGGGTAATGTTTCAGATGACAGTAGGGGTGGTGGTGGCGTAAAGTCGTACTTATCATCTCTCGATGAAGAGGAAATTGCCAGTTGCGTAAGGGTGATGGAAAAAAACGGATTTGGCCTATCACGCGAAGATGTATTGGACTTAGTGCAAGCGTACATTAGACAGAATAATTTTCAGACCAGATTTAAAGAACAACGTCCTGGTACCGACTGGTTTATTGCATTTAGAAAACGGCATCGTTTATCTATTAAAAAGCCCCAAAGTATTGAATACGTCAGATGTGACCAGGTGAATCCTTGggtaatttatgatttttatgACAAGTTAAGCCAGGTCATTAATGATTTAAACCTACAAGAACGTCCAGgccaaatttttaattgtgacgAGACCTCTTTTTGTCATGATccgtcaaaaacaaaaattgttggAGCTATCGGTGCTAAATGTCAACGGATTACTAGTTCCACGGGACGAGAAAACACTTCCGTCTTACTTTGCTGCTCTGCTGATGGAAAAACACTTCCATTGCTATGTGTTTTCAAGGGAAAGTATGTAATGGAAAATTGGATTGACCAGGAAGTTGCCACACAAACCGCAGTTTCCGTAACGGAGAGAGGATGGATGGAAACAACATTATTTTACAACTGGTTTAGAGATGTGTTTCTACTAAATATCGGCACTAATAGACCTGTTTTATTAGTGTATGACGGACACGTGACACATATTTCGACAAAACTGATCCAACTAGCACAAGAAAATGACATTACTATCATGAAATTACCACCTCATACGACCCATGTTTTACAACCCCTCGATGTGGCCGTATTTAAAGGTTTAAAATCAAATTGGGATAAAGAACTATGTAAATGGCAGCGCGACAACCCTAGAAAGAAAATTCCCAAACCTGAATTTACAGCTATACTGACTAGAGTTGTTGGTGAAATACCTAAGTCGAGTATCATAAACGGATTTAAGGCAACAGGAGTAtataatttagaaaaaagaGGTCCAAACAGAGATGCTCTCcccatttcaatttttaaaccgGATGACTTAAATAGATATAGAAACCACTTGTCTCTCGTTACCGCTGAAGACGAAATCGAGGCCCTCCCGTCTACAGGCTATAACACTGAATCGAAAAGCAATGACGACAATCCACAACCGAGTACATCTAAAGCTAATTCAACATTAATAGAACAGGAATCGCAAAACAACGATGACAATCCACAACCGAGTACATCTAAATCAACTTCAACATTAGTAGAACAGGCAGAAGACACTGAACATTCTTATGAAATAAAGTCAgagaaaacaacaaaaaaatgttttgaagaTGTTCTATTAGATATGTTCaagaaagataaaaaaaaaagtccagaGAGGAAACGTAGAAGGCTCGTGACAAATTGTGAAATAATAACCACTTCAGAATATCTAAAGAAGAAACAAGAAGAAGACAAAAAGAAGCAGcagaatttggaaaaaaaagcaaagttcctagataaaaaagcaaaaaagcaAACTAATAcgaagaatttgaaaagtgataaaaaaaagttcaataATTCGTCCAGTGATAGCGAAAGTAACTACTCCCTGCATGAAAGCGACGATAGCCTAACTCTCAATTTTTCAAACAGTGAAGAAGAAGTAAGTGTGAACATTTTACCTCCTTGTCAAACCTGGCATGTTGGAGACTTCGCTGTTGTTAAAGTTTTTGGCAAGGATAACGTATCGTTTAGAATGTACGTTGTACGAATCCAAACTATCGATGCCATTGGCTTCggggttaaatttttaaaaagacacGAGCAGACCATGAAATTTAAAGACACAGAAGAACAATCCTACGTTAAAAAGACCGATATAGTCCGAAAATTATCCCGTCCTTTACAAAATAAATCAGCACGGTATAAGGACATGGTTTTCTTTAACACAGATCTGACCGATTTAAGTAACCTTATtgactaa
- Protein Sequence
- MVRTYVRKTQKGAGFSYSREDLEKAVADVQNGNKATRGAAIHYNIPRSTLKHYVRGTRGTGNVSDDSRGGGGVKSYLSSLDEEEIASCVRVMEKNGFGLSREDVLDLVQAYIRQNNFQTRFKEQRPGTDWFIAFRKRHRLSIKKPQSIEYVRCDQVNPWVIYDFYDKLSQVINDLNLQERPGQIFNCDETSFCHDPSKTKIVGAIGAKCQRITSSTGRENTSVLLCCSADGKTLPLLCVFKGKYVMENWIDQEVATQTAVSVTERGWMETTLFYNWFRDVFLLNIGTNRPVLLVYDGHVTHISTKLIQLAQENDITIMKLPPHTTHVLQPLDVAVFKGLKSNWDKELCKWQRDNPRKKIPKPEFTAILTRVVGEIPKSSIINGFKATGVYNLEKRGPNRDALPISIFKPDDLNRYRNHLSLVTAEDEIEALPSTGYNTESKSNDDNPQPSTSKANSTLIEQESQNNDDNPQPSTSKSTSTLVEQAEDTEHSYEIKSEKTTKKCFEDVLLDMFKKDKKKSPERKRRRLVTNCEIITTSEYLKKKQEEDKKKQQNLEKKAKFLDKKAKKQTNTKNLKSDKKKFNNSSSDSESNYSLHESDDSLTLNFSNSEEEVSVNILPPCQTWHVGDFAVVKVFGKDNVSFRMYVVRIQTIDAIGFGVKFLKRHEQTMKFKDTEEQSYVKKTDIVRKLSRPLQNKSARYKDMVFFNTDLTDLSNLID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01240129; iTF_00195907; iTF_00195924; iTF_00195898; iTF_00195899; iTF_00195902; iTF_01241982; iTF_00195903;
- 90% Identity
- iTF_00195907;
- 80% Identity
- -