Ppte001110.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018375.1:14958573-14960311[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-12 5.6e-10 40.9 0.4 5 43 22 60 21 62 0.92
Sequence Information
- Coding Sequence
- ATGCCTcgaaactacaaaaaaaaattaggacaCACAAGAAAATTTCAATATGATCCAGTTTTTATGGAACGAGCACTGGCAGCTGTTGCAAATGGCCGTATGAGTATAAGAAGAGCTTCTGAGATGTATGCAGTGCCTTACACGACCTTACAGCGAAAATATCGCGCAGGCGAACAATCCTTAAATATTGGAGGACAACCGGTCCTTTCTGAACTCGAGGAGAAAAAGCTGGTGGATTGCATGTTACTATGTGCGGATTGGGGCTTTCCTCTTCAAAGTATTGATATTCGGTATATGGTGCAGCAATATCTAAACAAAGCAGGAAAAAGGGAAAAAAGATTCAATGACAATATGCCAGGAATAGATTGGTTCAAATCATTTATGCAGCGACATAAGAATCTCACGGTAAAATTGGCGGAAAATACAAAAAGAGTAAGGGCTGCCGTCTCCTAcgaaatagttgaacaatatttTCGTCAACTTGGAGAGTCACTGGAAGGTGTTCCACCGTCAAATGTCATCAATTATGATGAAACCAATTTTACTGACGACCCAGGAGCTGTAAAAGTCGTCGTAAGAAGGGGATCAAAACACGCTCATAGAGTTATCGATACGTCAAAAACCAGCACAAGCGTTATGTTTTCAGTTGCTGGTGATGGAACACTCTTGCCGCCCTATATTGTATATAAGGCAAAACATATGTACGAAGGATGGGCAGATGGAGGCTTCCCAGGTTCACGGTACAACAGAGCAATGAATGGTTGGTTTGACAGCACAACGTTTGAGGACTGGTTTATATCAATCGCTCTTCCCTACTTTAGGAAGTTGGAAGGTTCCAAGGTTATGATTGGAGATAATTTATGCAGTCACCTTACAATTAACGTTATTGAGCAGTGTGAAAATAATGGTATAAAGTTCGTACTTTTAGCGCCCAACTCGACAGATTTGCTGCAACCACTTGATGTTGCCTATTTTCGACCCCTTAAGAATGCTTGGCGAAAGGTGCTCACAAATTGGAAGATCAAAAACAGAGGTGTTCTTCCAAAAACTATGTTTCCTGCATTGTTGAATAAAACAATAGAAACAGTGGGCCTGAAATCAGTCTTAAATACCCAAGCAGGTTTTAAAGCTTGTGCATGGCATTaccaAAATGGAGAGACCGAGGAAGCAAGAGTAGAGAAAAGGTGGGCGAACACCATTGTCGATCATTTAAGAGAACTAAGAACAGGCTCTGGCGAAAATCCAAAAAGGGGTAAAAGGGTCAGTGTGATAGCAGGAAAAAGTATTTCTAAGAAAGACCTTGTAGAAGAAAGTGAAAGTTCTCAAAGTGAGCAAGAGAAAGAAGTCACTGATCTGAGTTCCTCAGAATTGGAAAACAACGACGGAGGTTCAACAGAGGGGATAGATACAAATTTTCAACTTGGAGAATTTGTTATCGTGAAATTTGTCACTAACAAAAGAGATAGATTTTTTGCTGCGAAAATTGAAGAGATTTTAGGCGAAGAGGCCACGATTAAATGTTTAAGAAAGAAGTCGTCAAAAAAAGAATCAGTTTTTGCCTATCCCGAAATTGAAGATATCGCCGTGATCAAGCAAgagcatattataaaaaaaatacaagccaTCCCCCTAAGAAGAGGAACATTTACTTTCAAGaacattaaaaactataacttagAATAA
- Protein Sequence
- MPRNYKKKLGHTRKFQYDPVFMERALAAVANGRMSIRRASEMYAVPYTTLQRKYRAGEQSLNIGGQPVLSELEEKKLVDCMLLCADWGFPLQSIDIRYMVQQYLNKAGKREKRFNDNMPGIDWFKSFMQRHKNLTVKLAENTKRVRAAVSYEIVEQYFRQLGESLEGVPPSNVINYDETNFTDDPGAVKVVVRRGSKHAHRVIDTSKTSTSVMFSVAGDGTLLPPYIVYKAKHMYEGWADGGFPGSRYNRAMNGWFDSTTFEDWFISIALPYFRKLEGSKVMIGDNLCSHLTINVIEQCENNGIKFVLLAPNSTDLLQPLDVAYFRPLKNAWRKVLTNWKIKNRGVLPKTMFPALLNKTIETVGLKSVLNTQAGFKACAWHYQNGETEEARVEKRWANTIVDHLRELRTGSGENPKRGKRVSVIAGKSISKKDLVEESESSQSEQEKEVTDLSSSELENNDGGSTEGIDTNFQLGEFVIVKFVTNKRDRFFAAKIEEILGEEATIKCLRKKSSKKESVFAYPEIEDIAVIKQEHIIKKIQAIPLRRGTFTFKNIKNYNLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01238497;
- 90% Identity
- iTF_01238497; iTF_01238498; iTF_01238499; iTF_01238579; iTF_01187000; iTF_01238520; iTF_01241818; iTF_01238496; iTF_01240034; iTF_01238501; iTF_01238627; iTF_01242062;
- 80% Identity
- -