Ppte030866.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018377.1:98504963-98519813[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-06 0.00055 21.7 0.0 12 37 287 313 278 319 0.90 2 2 2.7e-10 3.5e-08 35.2 0.1 3 39 345 381 343 387 0.85
Sequence Information
- Coding Sequence
- atgtcgaGTGACAgtgaaatagaaaatttaactcCACCCAATATTAGTGAAATTGCAGAAGCTGCTAAAAACAACTTATTAAAAAACGACGTTAAATCATTTTCCGAGAATGTAATGATGGCATATTTCCAAGAACTATCAAAAACGATGAAGCCTTCCTCACTTTGGTCATTTTACTCAATGTTAAAGGCCACAATTAATATAAATCACAATGTCGATATTGCAAACTACTCCAAATTACAAGCTCTCCTGAAGAGAAAATCGGACGGCTTCAAATCCAAAAAATCCAAGATTTTGACAAGCAAGAATATAAACGATTTTCTAGAAAACGAACCAGATGATAAACATTTGTTTATGAAGGTTGCTCTTATAATTGGTATAAGCGGTGCATGCAGGAAACAAGAGTTGCGTAATATAAAACCGTCAGATATTCAAGACACAGGGAAGAatctaattattaatattccCGATTCAAAAACTAAACGGCAACGTTCTTTTGTGGTGTCAGAATTTTTTTACCCcaagTCTGTTGGTATTAACAAGTTAGGAAAGGTTCCAAAACAAATAGCCATATATCTGGGACTACCAGAAGCAGCGACTTATATAGGACACTGTTTTCGACGCTCATCCGCGACTATTCTTGTTGACTCGGGTGGTGACTTATTAGATTTAAAAAGACACGGCGGATGGCAGTCCTTAGCCGTAGCTGAAGGGTATGTGGATAATTCCCTAAATAATCAAACTAACAATTCGTCTAAAATATCATCTGCAATAGCAAGTACTAGTAATAATTTATCAAAAAAGCCAAACAATACAAAAGGGAAATTGGAGGCCAGCATGAAAAAAGGTTTTGATGGTGTGATGTCTGGAAAATTTAGTACAAGAACAGCCGCCTCCTACTTTTCTGTGCCCAAAAGTTCCTTGGGGGACCGCGTTAAAGCTCTTCGACAAGGAAAGACTGTTAAAATGGTTAACATCATACCAACCTTTTACAAAAGAAAGGGGACTGTTACCAGAGCAACGTGGACTGCTGAAGCCCTACAGAACGCCATGGGGGTAGTAGCTTCAGGCACGTTGGGGGTTAATAGAGCAGCAAAGGCATATGGCATACCTAAAACGACTTTGAAAAATAGGATCAAAAACCAAAAGACAATAAAATCTTGCTCATTGGGAAAGTCTTCATGTTTAAATAAAGAAGCTGAAGCCAAGGATGCGGTAAGAACTATAGCCTTTGAACTggccgaaaaaaaaaataaaccaacaaGAGCAAAGGCAATTGATGATGATAGTGACACATTGTCTGAAAGTGAAATCGTTTTGCAAGATGACAGTACAGACGAAGAATGGAATGAAAATATTTGTGCAGGGTGTGGAAAAAACTATTCTGAAACCAAAAAAGTGACGACTGGTGCAAATGTATTCGATGTGATAGATGGTCACATGAAGGATGCATGA
- Protein Sequence
- MSSDSEIENLTPPNISEIAEAAKNNLLKNDVKSFSENVMMAYFQELSKTMKPSSLWSFYSMLKATININHNVDIANYSKLQALLKRKSDGFKSKKSKILTSKNINDFLENEPDDKHLFMKVALIIGISGACRKQELRNIKPSDIQDTGKNLIINIPDSKTKRQRSFVVSEFFYPKSVGINKLGKVPKQIAIYLGLPEAATYIGHCFRRSSATILVDSGGDLLDLKRHGGWQSLAVAEGYVDNSLNNQTNNSSKISSAIASTSNNLSKKPNNTKGKLEASMKKGFDGVMSGKFSTRTAASYFSVPKSSLGDRVKALRQGKTVKMVNIIPTFYKRKGTVTRATWTAEALQNAMGVVASGTLGVNRAAKAYGIPKTTLKNRIKNQKTIKSCSLGKSSCLNKEAEAKDAVRTIAFELAEKKNKPTRAKAIDDDSDTLSESEIVLQDDSTDEEWNENICAGCGKNYSETKKVTTGANVFDVIDGHMKDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -