Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000710.1:204181-206559[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.68 70 5.5 2.0 2 23 302 324 302 324 0.86

2 8 0.16 17 7.4 1.2 2 23 330 351 329 354 0.72

3 8 3.9e-05 0.004 18.8 0.4 1 23 356 379 356 379 0.96

4 8 6.3e-06 0.00064 21.3 0.5 1 23 387 409 387 409 0.96

5 8 0.033 3.4 9.6 0.9 1 23 415 437 415 437 0.97

6 8 0.0079 0.81 11.6 1.7 1 23 443 465 443 465 0.88

7 8 1.7e-06 0.00018 23.1 1.7 1 23 471 493 471 493 0.98

8 8 0.1 11 8.0 0.5 1 14 497 510 497 520 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.68	70	5.5	2.0	2	23	302	324	302	324	0.86
2	8	0.16	17	7.4	1.2	2	23	330	351	329	354	0.72
3	8	3.9e-05	0.004	18.8	0.4	1	23	356	379	356	379	0.96
4	8	6.3e-06	0.00064	21.3	0.5	1	23	387	409	387	409	0.96
5	8	0.033	3.4	9.6	0.9	1	23	415	437	415	437	0.97
6	8	0.0079	0.81	11.6	1.7	1	23	443	465	443	465	0.88
7	8	1.7e-06	0.00018	23.1	1.7	1	23	471	493	471	493	0.98
8	8	0.1	11	8.0	0.5	1	14	497	510	497	520	0.84

Sequence Information

Coding Sequence: ATGGATTATTTTTTGGACAATGATAGCCCAGAAAGAATTGTTATTGTGAATGATGATGGAGATACATACGAAGATATAGTCCAAGACATTTTTGGTTATGAAGAGCAGTCTATAGAGAAGAAATACAAATTCATTGAAGGACAGATAGAACAAAGTGAGAGCATCAAATGTACCGACACAGAAAAAAGACATGATAATGTTATCATGGTCACTGTTGAAGATGTATTAAAAGAATCATTAGAGCAGGAAACTTTCTTAAAACCTAACTTTTCTGAAAAAAGCCAGGGTATAAATATTTCCTATCAGTATGAAGATAACATTTCTTGTAAAGAGGAGGAAGATATAAAAGCTGAACAATTCTATGAAATTAGTACATATGGTAATGAGGAAGACACTTTTTCTGAACCACAAGAAGATGAAACTTATTCCAATAATGAAGCTGATGATATGGAAGATCACGATAACAATGAAGTATAtgttaaattgaaaacaaatcaAAACAGAACTATGAGTAATATTCAAATAGTTACTATTGAAGATGTTCTTAATTCTTCAAGAAAAGaagagcaatattttaaaaggatACCAAGatcagaagaaaaaaatgtaagagTTAATGATGGTTTAAGATCATTATCAAGATCAGAATCAGAAATTTCTGATTTTATAGGAAAAGAGGAAgacacaaataaaataattttatctgtgGAAGATGTATTGAAAGTAAAATGGAAACAAGATAAAACAAATGATGTTTCAGGCTCATTGTCAAGAATGAAAACAGAAGGTTGTGATTCTACAAATGGTAAAGATCAAGAGAATAAAATAATCTTGTCAATTGAAGATGTACTAAAAGCAAAACGATGGAGAAAGAATACAGCAAATGGTGTTTCAGGAACAGCTCAATGTGACATTTGTTTCAAAACATTTGATGAGTTTCGAAAAGTAAGGCTGCACAAATACAGAACTCATAATCCTACCTGCATTAAATGTTCAATTTGTGGTATTCAAAGTAACACTAGATCAGcaCATAATAAACATTTGACACAACACATAAATAAAAGGTATCCCTGTGATAAATGTGATAAAAGTTATACATCAAGATCAAAAATGATAGAGCATGTATTAAGAGTACATGAAAAGAAACATGATAATAGATACTTATGTCCAGAGTGTGGAAAAGGTTTTAAGTTTAGAAATGCATTGCAATACCATATAAACAAACATACCAACTCTAAAAACTTTATATGTCGTTATTGTGGATTTGCATGTTTGGTCTTAAGTGCCCTAAAACGGCATGAAAGAGTCCACACAGGAGAACGGCCATACCAATGTAAGCACTGTAGTAAAACATTTGCTGGAGCTCCGGAGAAACAGAAACATGAATTTGCCCATGAAGGAATTTTAAGATATAAATGCAAGTACTGTGACAAAAAATTTATACAACCCTATAATATGAAAGTACATTGGATGCAACATAAGGGACCGTACGCTTGTGAAATGTGCAAAAAGGCATTTACTGatgcagaaattttaaaattccacTATGCACATACacataagattaaaaatgttatcatTGAAGAGGACGATGAAGGGATATCACATAACGAGGAACCTGTAAtataa
Protein Sequence: MDYFLDNDSPERIVIVNDDGDTYEDIVQDIFGYEEQSIEKKYKFIEGQIEQSESIKCTDTEKRHDNVIMVTVEDVLKESLEQETFLKPNFSEKSQGINISYQYEDNISCKEEEDIKAEQFYEISTYGNEEDTFSEPQEDETYSNNEADDMEDHDNNEVYVKLKTNQNRTMSNIQIVTIEDVLNSSRKEEQYFKRIPRSEEKNVRVNDGLRSLSRSESEISDFIGKEEDTNKIILSVEDVLKVKWKQDKTNDVSGSLSRMKTEGCDSTNGKDQENKIILSIEDVLKAKRWRKNTANGVSGTAQCDICFKTFDEFRKVRLHKYRTHNPTCIKCSICGIQSNTRSAHNKHLTQHINKRYPCDKCDKSYTSRSKMIEHVLRVHEKKHDNRYLCPECGKGFKFRNALQYHINKHTNSKNFICRYCGFACLVLSALKRHERVHTGERPYQCKHCSKTFAGAPEKQKHEFAHEGILRYKCKYCDKKFIQPYNMKVHWMQHKGPYACEMCKKAFTDAEILKFHYAHTHKIKNVIIEEDDEGISHNEEPVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -