Pcer020150.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- ZFHX3
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010000473.1:778890-797406[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.8 82 5.2 0.2 1 23 34 57 34 57 0.88 2 15 0.099 10 8.1 0.8 2 23 75 97 74 97 0.93 3 15 4.7 4.8e+02 2.8 2.4 2 21 176 195 176 199 0.87 4 15 0.084 8.6 8.3 1.3 1 23 212 237 212 237 0.92 5 15 0.0062 0.64 11.9 1.6 1 23 255 277 255 277 0.97 6 15 0.0014 0.14 14.0 0.7 2 23 284 306 283 306 0.94 7 15 0.00074 0.076 14.8 3.0 1 23 415 439 415 439 0.92 8 15 0.011 1.1 11.1 0.6 1 22 459 480 459 483 0.89 9 15 0.0021 0.22 13.3 0.2 1 23 532 556 532 556 0.93 10 15 0.0022 0.23 13.3 0.0 2 21 621 640 620 641 0.93 11 15 1.1 1.1e+02 4.8 1.4 2 19 775 792 774 797 0.90 12 15 0.00023 0.023 16.4 2.5 1 23 1372 1394 1372 1394 0.99 13 15 0.0012 0.12 14.2 0.3 1 23 1493 1515 1493 1515 0.98 14 15 0.012 1.3 10.9 0.4 2 23 1667 1689 1666 1689 0.96 15 15 3.8 3.9e+02 3.1 3.5 3 23 1951 1973 1950 1973 0.89
Sequence Information
- Coding Sequence
- ATGAACTCCGACCTCTCCCAACTCGACAATCCCCATCAAGTCAAATCCGAACCCAACGACCTCGAAGAACCAAACCACCTGGACTCAAACCCAGGTCCACACATGTGTCCTTACTGCGACTATTCCAGTGATAGCGAAATGCGAATCCAAGCTCACATCCTAGCTCAGCACGGTTCCAATCATCCTGGTAACATCCAGCAACCTCAAGAACAGCAGGTGATCCATTGCCCGTTATGCCAGGACTTATTTAAAGACAGGAGTAAGCTGGAACGACATGTTATGCAGATCCATTCGGTGAACAGCGAGGGTTTACAAAGATTGTTAATGCTGGTGGATCAAAGTCATTGGTTGAATCAAGCGTCGAGGACGTCTACGCCGAATAACTCTTCTATGGCTGTACAAAATCAAGTTTCTCCGACCTCAGTGTCTTCCAAAGACTCGCAGAAGCTAGACAAATGTGAAAATGAAGATAATCCTGATCTTTTGTCGCCTATTAGCGATGATGCCGTCGAGAGTGAAAGTGAAAGATGTAGCACGTGCCTTAGAACCTTTCGAAACGTCGATGAACTTTGCTTTCATCAAAACGAGACTGGTCACCAGCTTGAAGTCAAGCAGACACCTAGTGGACCAGGGTATGTGTGCTGGAAGAAAGGCTGTAACCAGTTTTTTCCTACCGCTCATACGCTACAAATGCACTTTAAGGAAATACATGCAAAGAACTCCGTTGCTAATATGTCTGTTAGTGAAAAGCACGTCTACAAATACCGTTGCAATCAATGCTCTTTAGCGTTTAAGACTTTGGAGAAATTACAACTTCACTCGCAGTATCACATGATAAGAGATGCTACAAAATGCGTTTTGTGTGGACGCAGCTTCAGATCGCTAGTAGCTCTTCATAAACACGTTGAAAGCGTTCATTCGGAACTGACAGATGAAGAACTGAACGCTTACAAGCATAGCTTAATGAACAATCCTCTACTCTTAGCAGGATTACAAGGGCAAATTTTGGATAGTTCCACAAATGACTTATTGAAAAAGGAAAGCTTGCGAGGAGAAGAAAACGAGAGCACTGAGTGCGATGAAAGTAAGGACTTGAGTACAAGTCAATCACTCGACGATAGTAATCAAAATGACGGGGAGAATTCAGATGATAGCATTGTCTACAAAGACCAACAGTTCCTGGAAGACTACCTTAACAGCCAGGCCATGGCCGAAGATAGTTACAATGATCCCAATAGAAAGTACAAGTGTCATCGGTGTAGGGTTGCATTTACTCGACAAAGTTATCTTACAGCTCATAATAAGACGTTGCTGCATAGGAAAGGTGAAAAGCTCAGCTATCCCATGGAAAAGTACCTTGATCCTAATAGACCGTATAAATGTGACGTATGTAAAGAAAGCTTCACccagaaaaacattttgttggTCCACTACAATTCGGTCAGtcatttacataaattaaaaaggGCCATGCAAGAGCAGGCTAACAATAACAACAACCCTCCTGTCTCACCTATTATAGGTGCGACGCAGGCGCAAAACTTGTCCCTGACCCCGAAGAGCACGAGTAGCGAGGATGATGACAAGAAAAAATACCGGTGCAATATTTGTAAAGTCGCTTATACACAGGGCAGTACACTGGATATTCATATGAGGAGCGTCTTACATCAAACGAGAGCAAGTAAGCTGCAAGATCTCGCTCTAGCAGGGCAGATAGATCTGTCAAAGCCTTTAATAGAGCAGCCCGAAGTAGTGCAGTCGCCGAAACAACCCTCGCCGACGCCGAATGGAGGGGAGCTGGCCAAACAACCCTGCCCCACCCCGCCGTCTCCTTCAGGTACGTCAGGTATTCAAGGGATGAGTTGCGCGAAGTGTGGCGCGCCCTTTGCGAACCAAGATCAGTTGAACGCTCACCAGCTGTACTGTCTCTTCGCTGCGCCTATGGCCGTTTTGCAAGGTGCGAGCGATGACAGACAAGAGTGCGATCAAGACGTACAGTCTCGCGTAATGTCTGCGAAAAAAGGATCGCCGATTTATAAACATTTGCTTGAAGGTTACGGTTTCGATCTAGTAATGCAGTATAATGAGAGCCACCAGCGGAGACAACGACAGGCTGAAAAAGAAAAAGCTGAGGCAGAACTAAAGTTAAAGGAAGGTGCAAGTGGAAATCATAGTGTAGTTAGTGAGGAAAACATGCCTGATAACCACCAGGAAGTAAACGAAAGTGAGGAGATTAGAGAGGAAAGGGAGGAAGAACGAGAGAAACAAATTACCAACGATAAAGATGAAGACTTGGCGAGTCTGCCCGAAGTGAGTAAATCCACGTGCCAAACTTGCAACAAAGAGTTTTCGAGTGTGTGGGTGTTGAAGAGTCATTGTGAGGAAGTGCATAAAGACCTTGTACCGCTGGAATATCTCGAAAAATACGCGCAACAACTCAAAAatgaaatcgaaaaaaaaactgtcgtGGTTACCGCGGCTACGAGTTCGACAACGAGTGCTTTACCCCGTGTCACTACTCCTACGGGTGGAAACTCCAGTCCTGCGGCCGAAACTACACCTGATAAAGACCAAGAAGACAACAAGGATGCCCTTCACGTTAAGCTCAATCTCCAAACACCTCCTGAAGCGGCATCTACTGCTCCTAGCACGCCTACAAGCAGTAGTACCCCTGCTAGCTCTACTGATTCCTTACCAGCGAACATCCAAGCCATGCTTGCTCAGACTATGGCTCAGAATCCCATGGCTTTGGCTCAACAAATGTCGGAAATGCAAGCGGCGTTGAACGTGATGCAACTTCAACAGTTAAACTTTAACCCTGTGATGCAAATGATGGGGATGGGACTACCGTTGGGGCTTAATGCTTTGGCTGCTATGAATTTACAACCTCCTTTGGTGCCATTAATGATGCCCCCTCCTCCGTATGATCCGATGGGACAATTTGGACCGCAGGATCAGCAGGCTATGATGGCTAAGCAGCAGGCTGCTATGATGCAACAACAAGCGGTCGCAAATGCAGCAGCCAATCAAAAACGCGCACGAACTCGCATCACCGACGACCAGCTCAAGATCCTCAGAGCTCACTTCGATATCAACAATTCGCCCTCGGAGGATCAAATCCACGAGATGGCCAGTCAAAGCGGCCTTCCCCCCAAAGTGATTAAGCATTGGTTTCGAAACACCCTTTTTAAAGAAAGGCAACGGAACAAGGACAGTccgtataattttaataatcctCCGTCTACCACTTTAAATCTTGAGGAGTACGAGAAGACTGGCGAAGCTAAGGTTCAAACGTTGAATAGCTCTTCTGGCAGTAGCTGTGACGAAGctaataaaagtaaagattCCGCTTCGCCTCTACAAATTCCTGTTGTGCATCAGCTGGCAGAAGTAAAGCAGGAAATTAAAGAGGAGCCTACGGAAGACCACATGCTTCATCAGCCAAAATTTGACTTGAAGCCAAACGACTCTCTGGAAGAGAAAActcaaaatatgtttaatcTTCCCCCAAACTTGCAACCGCCCCAAAGCCCAGCAACATCAGTGGCTTCCATCGAGAGTATGAACGTTTCCTCACAACCCACCACTCCCACTAACCTCACGTTGAGTTCTATCATCGCATCACAACTCGGAGACACTCTAACTACCAGTACACCGACTCTAAACATGGCTGGGCTACAATCGCACCATGGTTTGACTAGTCCAATGTTACCGCCGCCAAAAATGAATCAGCAAAATTTTTCTAATCCAAATAACTTGCCTAGCTATCCATTGACTCCTAATAGGTGCTTAAGTCCCAGTCGGGAATACAGTAACCCTGGTAGCCACGGTTCTTGTGGATCATCTGGTAAGCGAGCGAACAGAACGAGGTTTACAGACTACCAAATTAAGGTTTTGCaagagttttttgaaaacaacGCTTATCCTAAAGATGACGATCTGGAGTACCTTTCCAAGCTTCTAAATCTTAGTCCTAGAGTAATTGTTGTTTGGTTTCAGAACGCCAGACAAAAGGCAAGAAAGGTTTATGAGAATCAGCCTGCTGCTGAACCAGCGCCTGGCATCGACGAATCTGGAGCGAACAGATTTCAAAGAACGCCCGGTTTAAACTATCAATGTAAGAAATGTCTTCTGGTGTTCCAAAGGTATTATGAGTTAATAAGACATCAAAAAACTCATTGTTTCAAAGAAGAAGATGCTAAGAGAAGCGCTCAAGCGCAAGCTGCAGCAGCTCAGATAGCTGCAGTGCTTAGCTCTGAAGACTCTAACTCTAGTACAACTGTAGAGCAAAATCAACAGCAACAAATGCAAACTCAACCTCAAAATTTAATGACAACTCAATCTAGTCAAGGATCTACTAACCAAACGATGAGTCCTGGACCGCCAAACCCTCCTACAACCCCAACTCCCAGTCAAGGAGGTGGAAATTTTCCCAGTTCGTCACCAACTCCTTCCGAAACTAAAGAAGGCACCTACCAGTGTGATAAATGCAACCTGGTATTCCCCAGGTTCGAGTTATGGAGGGAACATCAGTTAGTCCATCTTATGAATCCAAATTTATTTCCCGCCTATCCACCAGATAGTCCTTTTGGAATCTTACAACAACACGCTCAGTTGCAACAGTTAAATGCTAATTTGGGGGATGTTTCGAAGCAAAATAACCAAGCTGGACAATCTCCAAGCGTGCCAcaccctttaattaatatgtTGAATAATGTTACTGGGCAGAAACGTAAAATTGAGGAGTTTGGTGACGTGGAGAGTGATACCTCGGATCAACCGAAAGACAAAAGACTTAGAACTACTATTCTACCAGAACAGCTAGACTATTTATACCAAAAGTATCAAATTGAAAGTAATCCTTCTAGAAAGATGTTGGAAAGCATAGCACGAGAGGTAGGACTTAAGAAACGCGTAGTACAGGTTTGGTTTCAAAACACGAGAGCTAGAGAAAGGAAAGGGCAATTTAGAGCGCACGCGCAAGTAATCAACAAACGATGTCCTTTTTGTCCGGCGCTTTTTAAGGTTAAGAGTGCACTAGAGTCGCATTTAACTACAAAGCATGCCGACCAATGCGCTAGAGGAGACATCAACATTGATGCCCTACCCGACGAAGAAGTTAGTCTAGAAAGTGCTCCAAGTCTTTCTGGAGGAAGTGAAAACAAATTTCAGcagcaaaatcctaacttaatgcCTCCTTTATTTCCTAGTTTGCACCCTGATATGGAAAATTCGATCAAGAAATACTATGAAGAAAGCATGAAAAGATATATCAGCGAGCTTCAACAACATGCATCTTCCTCCAATGGCGACAAGAGTGAAATCAAGACCGAGAAAGGCGAAGGCGGAGAAATCCCTCTAGATCTCTCCAAACCCGTTGATCTTTCCAGGCCAATGAAGGTATCTATGGAGCACGGAAATCTTTGTGATCCAGGACCTTTAACCGACCTGAGTGAGCGATCACTTTGTGACGAACGTAGTGACTCTATGTCAGAGACAACCGAGTATTATGATGACGAAAGCAATCCTACCTCTCCAGCAAGTAGTACTCAAAGTGTTACTCAAAGACACCAATTAAATACTTCAGGAGGATCTCAGCATGGAGGGAACAAAAGATATCGTACCCAGATGAGTTCCGTACAAGTTAAAAtcatgaaatatttatttgctgACTATAAAACTCCTACCATGGCTGAATGTGAGAGTTTAGGAAGAGAAATCGGACTTCCCAAGAGGGTAGTGCAAGTGTGGTTTCAAAATGCACGAGCCAAAGAAAAGAAGGGGAAAATCGCTCTACAAAAGGTCCTGGGGCAACCTGAGAGCGACAATCCCCAACTGCCAGAAGACTGCAGGTTTTGTAACTTCAAGTACTCGCATAAATATTCTATTCAAGACCATATCTTTACCAAAAGCCACATTGGCAATATCCGCATGCATCTAGAGGCTCAAGGGAATAAAGAATGTCACGAGGGGAATGAGTTCCAAGTGCCTCAACTTCCTGGAGGCTCGGGGGGGATTAACGCTGACTCCACGACCAATAACCAAGCGGGAAATCAACAAATGCAACAGTCACCTAACAACCAAAACCAGTTGAACAACAACACGCACCTTCAACTTCTGCAAATGGCGGGGATTCCGATACAAGGCACCAAGACTCCCGAGCAGGAGGAAACTGCAGAGAGCCTGTTTCAACAATTGTACGCGTTGGGGAACAACTCTAATTTTGGGGTACAAAACCAGTACGTGCACCACGCTATGTTTGGAGCGAACGGTGAGTTctatgttgtatttttttag
- Protein Sequence
- MNSDLSQLDNPHQVKSEPNDLEEPNHLDSNPGPHMCPYCDYSSDSEMRIQAHILAQHGSNHPGNIQQPQEQQVIHCPLCQDLFKDRSKLERHVMQIHSVNSEGLQRLLMLVDQSHWLNQASRTSTPNNSSMAVQNQVSPTSVSSKDSQKLDKCENEDNPDLLSPISDDAVESESERCSTCLRTFRNVDELCFHQNETGHQLEVKQTPSGPGYVCWKKGCNQFFPTAHTLQMHFKEIHAKNSVANMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHMIRDATKCVLCGRSFRSLVALHKHVESVHSELTDEELNAYKHSLMNNPLLLAGLQGQILDSSTNDLLKKESLRGEENESTECDESKDLSTSQSLDDSNQNDGENSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCRVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQANNNNNPPVSPIIGATQAQNLSLTPKSTSSEDDDKKKYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLALAGQIDLSKPLIEQPEVVQSPKQPSPTPNGGELAKQPCPTPPSPSGTSGIQGMSCAKCGAPFANQDQLNAHQLYCLFAAPMAVLQGASDDRQECDQDVQSRVMSAKKGSPIYKHLLEGYGFDLVMQYNESHQRRQRQAEKEKAEAELKLKEGASGNHSVVSEENMPDNHQEVNESEEIREEREEEREKQITNDKDEDLASLPEVSKSTCQTCNKEFSSVWVLKSHCEEVHKDLVPLEYLEKYAQQLKNEIEKKTVVVTAATSSTTSALPRVTTPTGGNSSPAAETTPDKDQEDNKDALHVKLNLQTPPEAASTAPSTPTSSSTPASSTDSLPANIQAMLAQTMAQNPMALAQQMSEMQAALNVMQLQQLNFNPVMQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPYDPMGQFGPQDQQAMMAKQQAAMMQQQAVANAAANQKRARTRITDDQLKILRAHFDINNSPSEDQIHEMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVQTLNSSSGSSCDEANKSKDSASPLQIPVVHQLAEVKQEIKEEPTEDHMLHQPKFDLKPNDSLEEKTQNMFNLPPNLQPPQSPATSVASIESMNVSSQPTTPTNLTLSSIIASQLGDTLTTSTPTLNMAGLQSHHGLTSPMLPPPKMNQQNFSNPNNLPSYPLTPNRCLSPSREYSNPGSHGSCGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAAEPAPGIDESGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTVEQNQQQQMQTQPQNLMTTQSSQGSTNQTMSPGPPNPPTTPTPSQGGGNFPSSSPTPSETKEGTYQCDKCNLVFPRFELWREHQLVHLMNPNLFPAYPPDSPFGILQQHAQLQQLNANLGDVSKQNNQAGQSPSVPHPLINMLNNVTGQKRKIEEFGDVESDTSDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLESIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLTTKHADQCARGDINIDALPDEEVSLESAPSLSGGSENKFQQQNPNLMPPLFPSLHPDMENSIKKYYEESMKRYISELQQHASSSNGDKSEIKTEKGEGGEIPLDLSKPVDLSRPMKVSMEHGNLCDPGPLTDLSERSLCDERSDSMSETTEYYDDESNPTSPASSTQSVTQRHQLNTSGGSQHGGNKRYRTQMSSVQVKIMKYLFADYKTPTMAECESLGREIGLPKRVVQVWFQNARAKEKKGKIALQKVLGQPESDNPQLPEDCRFCNFKYSHKYSIQDHIFTKSHIGNIRMHLEAQGNKECHEGNEFQVPQLPGGSGGINADSTTNNQAGNQQMQQSPNNQNQLNNNTHLQLLQMAGIPIQGTKTPEQEETAESLFQQLYALGNNSNFGVQNQYVHHAMFGANGEFYVVFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196690;
- 90% Identity
- iTF_00196690;
- 80% Identity
- iTF_01238386;