Basic Information

Insect: Polydrusus cervinus
Gene Symbol: Zbtb41
Assembly: GCA_935413225.1
Location: CAKXYS010000697.1:203495-223015[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.2e-05 0.0013 20.4 0.1 1 23 301 324 301 324 0.95

2 13 0.0018 0.18 13.6 0.5 1 23 360 383 360 383 0.96

3 13 3.6e-05 0.0037 18.9 0.8 1 23 389 411 389 411 0.98

4 13 8.1e-06 0.00083 21.0 0.5 2 21 417 436 416 437 0.94

5 13 7.5e-06 0.00077 21.1 0.4 1 23 448 470 448 470 0.97

6 13 0.00064 0.066 15.0 0.3 1 23 481 503 481 503 0.99

7 13 0.00057 0.058 15.1 0.5 3 23 511 531 509 531 0.98

8 13 1.3e-05 0.0014 20.3 0.4 1 23 537 559 537 559 0.99

9 13 2.1e-05 0.0021 19.7 2.5 1 23 565 587 565 587 0.95

10 13 0.00023 0.024 16.4 3.5 1 23 593 616 593 616 0.96

11 13 0.0068 0.7 11.7 3.5 3 23 624 646 622 646 0.95

12 13 4.4e-07 4.6e-05 24.9 0.1 1 23 652 674 652 674 0.99

13 13 3.7e-05 0.0038 18.9 1.2 2 23 681 703 680 703 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.2e-05	0.0013	20.4	0.1	1	23	301	324	301	324	0.95
2	13	0.0018	0.18	13.6	0.5	1	23	360	383	360	383	0.96
3	13	3.6e-05	0.0037	18.9	0.8	1	23	389	411	389	411	0.98
4	13	8.1e-06	0.00083	21.0	0.5	2	21	417	436	416	437	0.94
5	13	7.5e-06	0.00077	21.1	0.4	1	23	448	470	448	470	0.97
6	13	0.00064	0.066	15.0	0.3	1	23	481	503	481	503	0.99
7	13	0.00057	0.058	15.1	0.5	3	23	511	531	509	531	0.98
8	13	1.3e-05	0.0014	20.3	0.4	1	23	537	559	537	559	0.99
9	13	2.1e-05	0.0021	19.7	2.5	1	23	565	587	565	587	0.95
10	13	0.00023	0.024	16.4	3.5	1	23	593	616	593	616	0.96
11	13	0.0068	0.7	11.7	3.5	3	23	624	646	622	646	0.95
12	13	4.4e-07	4.6e-05	24.9	0.1	1	23	652	674	652	674	0.99
13	13	3.7e-05	0.0038	18.9	1.2	2	23	681	703	680	703	0.95

Sequence Information

Coding Sequence: ATGGATATAACTGTAGTCAAAAAAGAAAACGGCGAAGAACAAGTGGTAAAAGTAGAACAACGTGTAGAGCAAGAAGAGGAGACGGTCACGACCGTAGTCTTGCAGAATATTTCAGAATTTGGAGAAGTCCAGGAAAAAATAGTCTCTGCAGAAAGCCTTCCGTATATCTTGAAAAACTATGGTGGAAACTCTGATGGTAACGTGCAAATAGCTCAGCTCGAAGATGGACAGTTGACTTATATTATTGAGAATCCAGAGGGTTTCGACGAAGGTGCTGAGTTTGAATTGGCAGATGGGGAACATTACATCATAGAAGAATATCAGGAAAATTGTGAAGAGTCACAGGATCAATATGAAACTGTTTACATACAACATATTGAAGCACCTCCAGAAGATACAGAAGTTGAAACGACAGAGGTTTACACAATTTCCGAAGAATTTGAAGATCAGTACTCGGAAGAAGATAATCAgcatgatgatgatgatgatgaacaACAAATGGCCATTGTTGAGGAGGTAGAAACCATCCCCGAGGAACATATACTGGAGGAAAAACCATTGCCTACTatTATCCAACAAGAGAAACTTCaagtcaaaataaaacaaacattaaaaCCACAGCAAGAAGAAAACGAGGTACCAGCGGTCCCTGTAACTCCTGTAAAAGTTCCACCCTCACCGGATAAACGGCCTATAAAGCAAGAAGTAGAGGAATCTCATGAACCTAAACAACAAGAGCTTGTAGAAGATCAAGATGAAATGATATATGAAAGTGCAAGTGAGACGACTGACACAGATGCTCCTGTATCAGCAGATGAGGCAGGAAAGAAGATTTCCAAAGAGGAGGCAGGCAAAGAAGTTGAAGAGACCAAGCCTAGTAAGGAGGACTTACAGCTTATTTTCGAGTGTAGCATATGCGGGAAAGGATTCAAAACGCCTACAggCGTTAAAAGACACATAAGCCTTATTCACTGGAAGGCAGAGGAAAAGAAAAAGGATAAAAACGACGATGTTCTTTCCTTTTCTTTGTGTCACTGCTGTGGGGAACCATCAGATTCAGCTCATACAaCTGGAGATTTTAAATGTAACTTGTGCGACAAACTTTTTATCCAACAAAATTCCATGGATAGGCACGTCAGTATCGAACATCCCGATGGAGATAAGTATGAGTGCTATGAAtgcaaaaagatttttaaacTGAAAGACCAGCTGATTGAACATACTCGGGTACACTCGTTGAAATCGGTAAAATGCGAAGATTGCGGCAGAGAATTTACGAGAAAATACCATTTGGACCGACACATTCTTCAGACCGGATGTATGGGTGTGCCCAAACAAGTGTATGACTGTAGGGTATGTGCCAAGTCATTCACAAGAAAAGATAATTTAGCGGAACATCTAAAAATACACGCTGgcataatgaataaaaaaaagaagaggTTCACCTGCGAATTCTGTATGAAGGAATTTAACAGCGCGGCCCTTTTGAATATTCACGTGAGGACACACACAGgagaaAGGCCATATGGATGTGATGTTTGTGAGAAAAAGTTTCCCTCTACCGGGGCGATGAAGAAACACCGGAGAATGCATACAGGAGAAAAACCATATACGTGCCCACAGtgTGGGAACAAATTTGCGGCCAAAGAAACTCTAAACAGACATTGGCGTACCCATACCGGCGAGAAACCACACGAATGTAAATTTTGTGGAAAGTCGTTTATCCAAGCTGCTCAGTTGCGCGCGCACATCTTCCACCACACTGGCGAGAACGCGTACACTTGTCCCCATTGTAACCGCGCCTTCAATCGCAAACTGAGGCTCACGACGCACATCAAGTTCATGCATGAGGGTGCGCAGCCCCTGAACTGCCCCCACGAAGGCTGCACCAAGACATTCTTCAGGAAAGAGGATATTCACAGGCATCTGATGACGCATAGCGGAGAGAAACCCTATGAATGTGAAGTATGCGGCAAAGCATTTGTTGTAAAGTCTTCCCTGAAGATCCACCAGCTGACCCATCGAAACGAGCCACCGGTGAGCTGTGAAGTGTGTAGCAGGGCCTTTATCAGACAGGACTGTCTCATGAGACACATGCGGGCAAGGCATAGgGACGTGTTAGAAGACATTGTCGCCAACGCGGAAAAGAAAAGGTTACAGCACCAACTTTTCCAAGCAGTTACGACTGCCGCTAATAGAGACACAGTGAGAGATACAATCGTTTGGAACGAATTGACACTAACCGaatCCATCAAAGACTTGTTAGGTCTATTAGTGGACGAAGAATGTTTGACAGAATTCGGCCACCCAGAGGCACCGGTCGATAAAGTGCTGGAGTCGGTTATAAGGCGGTGCGGCCACGCCCCAGCTTCAGAAGCCGATTTTGACTACATCGAAAAGATGAGGGAAAACGCCAAGTTACTATTCACGgtGGTAATTGATGATCAAGCAGTGAAAGAACTCCTCAACAATCAAACAGTCGACGAAGTAATCATGCACGTCTTGAAGCTAGCAAAAAAACAAGCTGACGGTACCTTAATTACTGAGGAGGAAATTAACATCGAGGAAAAACCCGTTGTAGAAGAAATTACCGTCGAATTGACTGACAGCGGTGATTATACCATAGAAGACTCAAAAAAACGATTTAGAAACAAAAATCCGAAAACTTACATTAAGAGAATGGACGATAGGATCGAGTACGAAATTGACAACCCTGACTCTGCCGAAGAAGATGAAGCTGACAATCCCGCTTCTGAACCTGACGCTGATAATCCTGATTTTGTAAGCATTGAAGGGGAATATAATGAGGAGGATAACGCTGATGATAACGTATATTTAAATGATGAAGATGGGTATATTGAACATAAAGTGAACGTAGCTAATGACGTAGATAGTTCGGAAGAAGTAATGGAGACTGAAAATGATAATGAAGAGCACGGCGATGATGATACGGAAACTGCCGAAAGCATGGAAGTTGAGGGCGAAAATTTGTAA
Protein Sequence: MDITVVKKENGEEQVVKVEQRVEQEEETVTTVVLQNISEFGEVQEKIVSAESLPYILKNYGGNSDGNVQIAQLEDGQLTYIIENPEGFDEGAEFELADGEHYIIEEYQENCEESQDQYETVYIQHIEAPPEDTEVETTEVYTISEEFEDQYSEEDNQHDDDDDEQQMAIVEEVETIPEEHILEEKPLPTIIQQEKLQVKIKQTLKPQQEENEVPAVPVTPVKVPPSPDKRPIKQEVEESHEPKQQELVEDQDEMIYESASETTDTDAPVSADEAGKKISKEEAGKEVEETKPSKEDLQLIFECSICGKGFKTPTGVKRHISLIHWKAEEKKKDKNDDVLSFSLCHCCGEPSDSAHTTGDFKCNLCDKLFIQQNSMDRHVSIEHPDGDKYECYECKKIFKLKDQLIEHTRVHSLKSVKCEDCGREFTRKYHLDRHILQTGCMGVPKQVYDCRVCAKSFTRKDNLAEHLKIHAGIMNKKKKRFTCEFCMKEFNSAALLNIHVRTHTGERPYGCDVCEKKFPSTGAMKKHRRMHTGEKPYTCPQCGNKFAAKETLNRHWRTHTGEKPHECKFCGKSFIQAAQLRAHIFHHTGENAYTCPHCNRAFNRKLRLTTHIKFMHEGAQPLNCPHEGCTKTFFRKEDIHRHLMTHSGEKPYECEVCGKAFVVKSSLKIHQLTHRNEPPVSCEVCSRAFIRQDCLMRHMRARHRDVLEDIVANAEKKRLQHQLFQAVTTAANRDTVRDTIVWNELTLTESIKDLLGLLVDEECLTEFGHPEAPVDKVLESVIRRCGHAPASEADFDYIEKMRENAKLLFTVVIDDQAVKELLNNQTVDEVIMHVLKLAKKQADGTLITEEEINIEEKPVVEEITVELTDSGDYTIEDSKKRFRNKNPKTYIKRMDDRIEYEIDNPDSAEEDEADNPASEPDADNPDFVSIEGEYNEEDNADDNVYLNDEDGYIEHKVNVANDVDSSEEVMETENDNEEHGDDDTETAESMEVEGENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196565;
90% Identity: -
80% Identity: -