Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000925.1:200461-215586[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.58 60 5.7 0.6 2 23 474 493 474 493 0.79

2 27 0.59 61 5.7 0.8 3 12 507 516 506 525 0.83

3 27 1.3 1.3e+02 4.6 3.8 1 23 529 551 529 551 0.96

4 27 0.01 1 11.2 0.2 1 19 556 574 556 576 0.97

5 27 0.38 39 6.2 3.1 1 21 582 602 582 603 0.92

6 27 2.6e-05 0.0026 19.4 3.6 1 23 610 632 610 632 0.98

7 27 0.00058 0.06 15.1 4.1 1 23 638 661 638 661 0.94

8 27 0.0022 0.23 13.3 1.7 1 23 672 695 672 695 0.96

9 27 3.6e-07 3.7e-05 25.2 0.5 2 23 704 725 703 725 0.97

10 27 5.6 5.7e+02 2.6 0.2 3 12 851 860 850 868 0.83

11 27 0.016 1.6 10.6 0.7 1 23 872 894 872 894 0.97

12 27 0.11 11 8.0 1.0 1 23 900 922 900 922 0.95

13 27 0.46 47 6.0 0.2 1 23 926 950 926 950 0.77

14 27 5 5.1e+02 2.7 1.0 2 23 957 978 956 978 0.86

15 27 0.0033 0.34 12.7 3.2 1 23 984 1007 984 1007 0.92

16 27 0.00076 0.078 14.7 1.8 1 20 1018 1037 1018 1038 0.96

17 27 0.0001 0.011 17.5 1.4 2 23 1050 1071 1049 1071 0.98

18 27 1.5e-05 0.0015 20.1 0.6 1 21 1077 1097 1077 1098 0.96

19 27 3.8 3.9e+02 3.1 0.7 3 18 1161 1173 1160 1178 0.70

20 27 0.0022 0.23 13.3 0.4 1 23 1181 1203 1181 1203 0.97

21 27 0.0057 0.59 12.0 0.2 1 23 1209 1231 1209 1231 0.93

22 27 0.069 7.1 8.6 0.1 1 23 1235 1259 1235 1259 0.94

23 27 5.7e-05 0.0058 18.3 0.5 2 23 1266 1287 1265 1287 0.97

24 27 2.2e-05 0.0023 19.6 2.0 1 23 1293 1316 1293 1316 0.97

25 27 0.00026 0.027 16.2 2.7 1 23 1327 1350 1327 1350 0.96

26 27 0.00019 0.02 16.6 1.2 2 23 1359 1380 1358 1380 0.97

27 27 3.1e-06 0.00032 22.3 2.2 1 23 1386 1408 1386 1408 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.58	60	5.7	0.6	2	23	474	493	474	493	0.79
2	27	0.59	61	5.7	0.8	3	12	507	516	506	525	0.83
3	27	1.3	1.3e+02	4.6	3.8	1	23	529	551	529	551	0.96
4	27	0.01	1	11.2	0.2	1	19	556	574	556	576	0.97
5	27	0.38	39	6.2	3.1	1	21	582	602	582	603	0.92
6	27	2.6e-05	0.0026	19.4	3.6	1	23	610	632	610	632	0.98
7	27	0.00058	0.06	15.1	4.1	1	23	638	661	638	661	0.94
8	27	0.0022	0.23	13.3	1.7	1	23	672	695	672	695	0.96
9	27	3.6e-07	3.7e-05	25.2	0.5	2	23	704	725	703	725	0.97
10	27	5.6	5.7e+02	2.6	0.2	3	12	851	860	850	868	0.83
11	27	0.016	1.6	10.6	0.7	1	23	872	894	872	894	0.97
12	27	0.11	11	8.0	1.0	1	23	900	922	900	922	0.95
13	27	0.46	47	6.0	0.2	1	23	926	950	926	950	0.77
14	27	5	5.1e+02	2.7	1.0	2	23	957	978	956	978	0.86
15	27	0.0033	0.34	12.7	3.2	1	23	984	1007	984	1007	0.92
16	27	0.00076	0.078	14.7	1.8	1	20	1018	1037	1018	1038	0.96
17	27	0.0001	0.011	17.5	1.4	2	23	1050	1071	1049	1071	0.98
18	27	1.5e-05	0.0015	20.1	0.6	1	21	1077	1097	1077	1098	0.96
19	27	3.8	3.9e+02	3.1	0.7	3	18	1161	1173	1160	1178	0.70
20	27	0.0022	0.23	13.3	0.4	1	23	1181	1203	1181	1203	0.97
21	27	0.0057	0.59	12.0	0.2	1	23	1209	1231	1209	1231	0.93
22	27	0.069	7.1	8.6	0.1	1	23	1235	1259	1235	1259	0.94
23	27	5.7e-05	0.0058	18.3	0.5	2	23	1266	1287	1265	1287	0.97
24	27	2.2e-05	0.0023	19.6	2.0	1	23	1293	1316	1293	1316	0.97
25	27	0.00026	0.027	16.2	2.7	1	23	1327	1350	1327	1350	0.96
26	27	0.00019	0.02	16.6	1.2	2	23	1359	1380	1358	1380	0.97
27	27	3.1e-06	0.00032	22.3	2.2	1	23	1386	1408	1386	1408	0.98

Sequence Information

Coding Sequence: ATGGACCTTCAAGTTGTGACGTCAAAGCGAGGAAAGCAAGTTATTCTTTATTCCGGctatagatttaatttaaaatcaacgaATAAAAACAACACCATTAGATGGATATGTGCCAACCGAACCTGTCCCGGAGCCATCATCACAGATAACGCGCCAGCAAGTGTAATTCAAAGCAAGCAGCACACCTGTGTTCCTGATGTTGCTAAGAATGAAGTAGAACTCTGCATCCAAAAAGCAAAGAAGAGGGCCCGAGAGGAACTCACGCCAGTACCACAGATATATCGCCAGGAGTTGGTAACTGCGAGGAATATGGGACTGGATTTCGTCACGCAGATTCCAGAACTTACATCAATTAAAACATCGCTCTACAGAGAAAGGCATAACTCACTGGGAGTCAAATTCTTACCCAAAAGCCGAGAACAAGTTATTATTCCAGAATCAATAAAGGAGAACCTTATAGTGGACGATGGCAACGAAGAAAGGATTCTAGAGTTCGGATACAAACTGGACAGTCTTCTCGCcggcaataccacatttttcctGGATGGCACGTTTAAAAGTTGTTGTCCGCTTTTCGACCAACTATACACACTGCATGTAGATATCGGAAGCACCGAAGAGAGGACATGTATAGTTCCCGCCATATATGCTTTGTTACCCAACAGAAAGAAATCCACTTACAAAAGATTGTTTTCCTGTCTAAAAAAGCAACTTAAAAGTTTTCATCCATATAAGATACACATCGATTTTGAAGCCGCTGCGATAAGTGCCGTCAAAGAAGAATTTGTTACGGCTGATGTAAAGGGTtgtaattttcatttcaaccaAGCCTTATGGAGAAAAGTGCAACAGTTAGGAATGACACAGGCTTACAGAGACAATAAAGAAATCAGAGACCATGTGAAGATGGTTGCTGCATTGGCACATGTGCCAATCGAATATGTTTCGGAGGGATGGCTCTCTATTATGGAATCTACACCACAAGACGAAGCACTAACCGAATTTTATGACTACTTTGTTGACAGTTGGATGGACAAGGAAGAAATATGGGTTTGCAGTGGAGAACGGCATCGCACTACCAATTCCGTAGAAGGCTGGCACAACcgctttaacaaaaaaattggaaaatcgcaCCCGAATATATACGAACTGTTGAAAGGCCTACAAGAGGAAATGTTGTTCTACGACACCATATATGAAAGAAATAACGTACATATGCAGGTTCCTAAACGAGCCAAGAAGTACAGTGAACGAGACCATAGAGAAAACATTAAACCACAATTATACCTGGTTAAAACAGAAGGTGGACTTCAATTCATCGTTGATACGGCACCCCCAGTGCTCGAGACTCCCAGATTTGATCTTACAGAACCAAAGATCAAGGTTGAGTCGAACATTGTACTTGTTCCAAAGCTAGAAGTGTGCCCGGTATGCGGAAAAACCGTTAAATATTTGAAACAACACTTAAGATTCCAACATCAAGGGGCTAAAAGAAGCGAAAGGAACCATTCGGGATTATGTCCTGTTTGcgggaaattttttaaacacgttGCTTATCACATGTCGAAAACTCACAAGGAAGAGTTTTGTTGTGACCAATGTTGTGCTATATTTAAGTCGCAGGAGCTTTTGGAGGAACATAAACAAATGCATACTAGTGATCACTATAGATGTGACAATTGCACTATGGTCTTTAAAACCCTTACCGACTTGGCTATTCACAACTATTGCCATACCAACACTTACTCTTGTCCTAAATGCAATACTATATGTAAGTCGAGACAATCACTGAAATTCCACGTAAGAAAAGAAGAGGAAAGTTTCAATTACCACTGTCACATCTGTGGGCGAGGATTTGTCCAGCAACATCTGCTGCAAGTCCACATCGAGAGGCACGAGAATGTCAAGAAGTATGAATGCGATATATGCCAGAAAAAATTCACTTTTAAAACCTATTTGAACAATCACAAAAAGTTTAATCACAAAAAGGAACTTTTCGGCGTGGAAGAAATTTTTCAATGTGAAATGTGCGCTAGACCGTTTTCGTTTGAGTGTTCTTTAAAACGCCATCTTAACCTTGTTCACAAAGTTGGCGAAGAGAGGAGTGTAACTTGCAATGTTTGTAACAAAGTCTTTACTACTGCCTATAGTCTTAAGGTCCACATGAGATTACATACAGCTTTGTTGAGAACAAAAACAAGGAAAAAATTGATtaggaaaaaaagaaaagaaacttGGAGTTCCGACGATGATGATGATTGGGTTAATGAAAAGAATTCGGAACTACATAAAGAAAATAGTTCTAGGTCAAGAAGAAACACTCGTAAATGTAAAGGAAACGCAATGGAAAAATCGGCACTGGAAAAATTATCACTTAAATTGAATGAAGAACTAAACGCGGAAGCAAATGTTAAAGATGAAAGTGATTGGTCAGAAGTGGATTCTGATTGGATAATAGATACAGATATAGAAGAACAATCAGGgacattaaagaaaaaatcaatgGACGACACAAATCTAAGTAAACGAAAACAAGATAAATCCGGCCTTTGTCCTCAGTGCGGAAAAGTGGTTTCTGACATTAGAGGTCACACAAAAAGTCACGCTAATGTATTCTCCTGTGATCTGTGTTTCATAAACTTTAAAAACGAGAAACTTTTAAACGAACATAAAGAAGTACACGAATCGGAGAACCCTTACAATTGTGACAGGTGCAATATGATATTCAAAAATGTTACTAAGTTAGCTTTGCATAGGTTTCTACATACTGGTAGTTACACTTGCCCTATATGTGGGTTTGTCGCTACAAGTAAATTTAGAAACTCTATCATCGCCCACATTAAAAGACACGAAGACAACTATGCGGTAAGATGTGAGATCTGTAACAGAGGGTTCCTGTGTAAGAAGAAACTAGAAGAACACATAGAGTGGCATGAAAATATTCCCAAATACGAATGCGAACTTTGTCACAAGAAATTCCCTGTCAAGTCTTACCTCACTCTCCACAATAAGTTTAATCACAAAAAAGAACTCTATGGTACAGAAGAGATCTTCCAATGTGAACTTTGCGGCAGAAAGTTTACATTTGAGAAGAGCTTTAAAAGACATTTAAGCTGCATTCACCGCGTTGGAAAAGATTTGACAGTAAAATGTCAAGTATGCGACAAACTAATAGCCAACAACCACAACTTAAAGAAACACATGAGAGTTCATACCGGGGAGAAAAACTACAGTTGTGACGTGTGCGGGAAAACATTTTCTCAGAAACAGTACGTCACTAGACACCAGAAGGCAGAGTCAGAGGAACCTCAGTATACATATGAACTCGAACCAGAGCATAATAGTGTTGAATCTAATATTGCAATCCCCTCCAATACTATTATTCCAAGAAATACCACGGGTATTCAACTACTTTCTACCAATAGATTCGCTCAAAATAAGCCAGAACTACGTAGACCTCACAACAAAAGAGAAGTTTTATGTACAATTTGCGGAAAAATGGTTAAGAAATACAGCCAACATTTAAAAACTCATGGAAATTATATATGTCCCCAGTGTATGCTAAACTTTAAAACAAAACGTCAACTTGAAATTCATCAAGAAGTTCATATCAGTACCGATCAATATCTTTGTGATATTTGTAAAATGATTTTCGTAACTCAAGCCCAACTAGCAATTCATAAATATAATCATACCAATCAGTATGTTTGCCCTGTATGTGGATTTCAGGCTTTAACTAAAAGCGCTAGTTCACTTAAAGCACATATTTTAAGGCACGAGGAAAAATTTACAGTTAGATGTAAGTATTGTAACAAGGGATTTTTTTCTCCTTCCAAACTCCAAGACCACCTAGAGGTCCACCAGGGCTTTCCTAAATACGAGTGCGAAATATGTCACAAGAAGTTTACTGTTAAGGCTTACCTAAAGATTCACATTAACTACAATCATAAAAAGGAAGTTTTTGGCATCGAGGAAAAACACCAATGCGATATCTGTGGAAGAAATTTTACTTTCGAAAAGAGCTATCGAAGACACTTAAGTAGCATCCACAAGATTGGCAAAGATCATACTGTTGAGTGTCAAATATGTCACAAAATCATTGCCAATAAAACGAAtctaaagaaacatttaaaaattcacACTGGAGAGAAGAATTTCGTTTGTGAGACCTGTGGAAAGAAGTTTTCTCAAAGAAAATACTTGAAGAACCATCAGTCTGTACATTTGCGCGAAACTGGTGTTTTACCAAGAAAACAAAATTCAACGAAGGTTTTAAATGTTGAAAGTATTGTACAAATAAATTTACATGATATTGCTATTGCTATATAA
Protein Sequence: MDLQVVTSKRGKQVILYSGYRFNLKSTNKNNTIRWICANRTCPGAIITDNAPASVIQSKQHTCVPDVAKNEVELCIQKAKKRAREELTPVPQIYRQELVTARNMGLDFVTQIPELTSIKTSLYRERHNSLGVKFLPKSREQVIIPESIKENLIVDDGNEERILEFGYKLDSLLAGNTTFFLDGTFKSCCPLFDQLYTLHVDIGSTEERTCIVPAIYALLPNRKKSTYKRLFSCLKKQLKSFHPYKIHIDFEAAAISAVKEEFVTADVKGCNFHFNQALWRKVQQLGMTQAYRDNKEIRDHVKMVAALAHVPIEYVSEGWLSIMESTPQDEALTEFYDYFVDSWMDKEEIWVCSGERHRTTNSVEGWHNRFNKKIGKSHPNIYELLKGLQEEMLFYDTIYERNNVHMQVPKRAKKYSERDHRENIKPQLYLVKTEGGLQFIVDTAPPVLETPRFDLTEPKIKVESNIVLVPKLEVCPVCGKTVKYLKQHLRFQHQGAKRSERNHSGLCPVCGKFFKHVAYHMSKTHKEEFCCDQCCAIFKSQELLEEHKQMHTSDHYRCDNCTMVFKTLTDLAIHNYCHTNTYSCPKCNTICKSRQSLKFHVRKEEESFNYHCHICGRGFVQQHLLQVHIERHENVKKYECDICQKKFTFKTYLNNHKKFNHKKELFGVEEIFQCEMCARPFSFECSLKRHLNLVHKVGEERSVTCNVCNKVFTTAYSLKVHMRLHTALLRTKTRKKLIRKKRKETWSSDDDDDWVNEKNSELHKENSSRSRRNTRKCKGNAMEKSALEKLSLKLNEELNAEANVKDESDWSEVDSDWIIDTDIEEQSGTLKKKSMDDTNLSKRKQDKSGLCPQCGKVVSDIRGHTKSHANVFSCDLCFINFKNEKLLNEHKEVHESENPYNCDRCNMIFKNVTKLALHRFLHTGSYTCPICGFVATSKFRNSIIAHIKRHEDNYAVRCEICNRGFLCKKKLEEHIEWHENIPKYECELCHKKFPVKSYLTLHNKFNHKKELYGTEEIFQCELCGRKFTFEKSFKRHLSCIHRVGKDLTVKCQVCDKLIANNHNLKKHMRVHTGEKNYSCDVCGKTFSQKQYVTRHQKAESEEPQYTYELEPEHNSVESNIAIPSNTIIPRNTTGIQLLSTNRFAQNKPELRRPHNKREVLCTICGKMVKKYSQHLKTHGNYICPQCMLNFKTKRQLEIHQEVHISTDQYLCDICKMIFVTQAQLAIHKYNHTNQYVCPVCGFQALTKSASSLKAHILRHEEKFTVRCKYCNKGFFSPSKLQDHLEVHQGFPKYECEICHKKFTVKAYLKIHINYNHKKEVFGIEEKHQCDICGRNFTFEKSYRRHLSSIHKIGKDHTVECQICHKIIANKTNLKKHLKIHTGEKNFVCETCGKKFSQRKYLKNHQSVHLRETGVLPRKQNSTKVLNVESIVQINLHDIAIAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -