Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010001160.1:46005-53847[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 1.1 1.2e+02 4.8 0.0 2 21 79 98 78 99 0.88

2 31 0.035 3.6 9.5 0.1 1 23 136 159 136 159 0.94

3 31 0.5 52 5.9 0.1 1 23 162 184 162 184 0.92

4 31 0.00014 0.014 17.1 4.1 1 23 227 250 227 250 0.97

5 31 3e-05 0.003 19.2 1.3 1 23 279 302 279 302 0.94

6 31 0.00017 0.017 16.8 0.7 1 23 308 330 308 330 0.98

7 31 0.012 1.2 11.0 2.1 1 13 336 348 336 353 0.90

8 31 0.0067 0.69 11.8 0.2 2 20 417 435 416 437 0.94

9 31 6.2e-05 0.0064 18.2 2.9 1 23 462 484 462 484 0.99

10 31 0.53 54 5.8 0.1 1 23 507 529 507 529 0.97

11 31 0.034 3.5 9.5 0.3 2 19 534 551 533 555 0.90

12 31 6 6.1e+02 2.5 0.4 3 23 563 586 561 586 0.71

13 31 0.00076 0.078 14.7 4.4 1 23 592 614 592 614 0.97

14 31 0.00018 0.018 16.7 1.7 1 23 620 643 620 643 0.95

15 31 0.047 4.8 9.1 0.1 2 21 655 674 655 675 0.93

16 31 0.00013 0.013 17.2 0.4 1 23 691 713 691 713 0.95

17 31 1.2e-05 0.0013 20.4 0.3 1 23 719 741 719 741 0.98

18 31 0.00035 0.036 15.8 2.5 1 23 747 769 747 769 0.99

19 31 0.00092 0.094 14.5 0.8 1 21 775 795 775 796 0.95

20 31 1.5 1.6e+02 4.3 0.4 2 20 888 906 887 908 0.88

21 31 0.00029 0.029 16.1 0.9 3 23 934 954 932 954 0.96

22 31 0.39 40 6.2 0.0 1 23 975 997 975 997 0.97

23 31 6.9 7e+02 2.3 0.1 2 23 1002 1023 1001 1023 0.92

24 31 7.1 7.3e+02 2.2 0.3 2 23 1029 1053 1028 1053 0.79

25 31 2.6e-05 0.0027 19.4 3.0 1 23 1059 1081 1059 1081 0.98

26 31 0.001 0.1 14.4 3.2 1 23 1087 1110 1087 1110 0.95

27 31 0.014 1.5 10.7 1.4 2 20 1122 1140 1121 1142 0.95

28 31 8.3e-05 0.0085 17.8 0.2 1 23 1156 1178 1156 1178 0.95

29 31 2.4e-06 0.00025 22.6 0.6 1 23 1184 1206 1184 1206 0.97

30 31 0.00049 0.05 15.4 2.0 1 23 1212 1234 1212 1234 0.99

31 31 0.00043 0.044 15.5 0.8 1 21 1240 1260 1240 1261 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	1.1	1.2e+02	4.8	0.0	2	21	79	98	78	99	0.88
2	31	0.035	3.6	9.5	0.1	1	23	136	159	136	159	0.94
3	31	0.5	52	5.9	0.1	1	23	162	184	162	184	0.92
4	31	0.00014	0.014	17.1	4.1	1	23	227	250	227	250	0.97
5	31	3e-05	0.003	19.2	1.3	1	23	279	302	279	302	0.94
6	31	0.00017	0.017	16.8	0.7	1	23	308	330	308	330	0.98
7	31	0.012	1.2	11.0	2.1	1	13	336	348	336	353	0.90
8	31	0.0067	0.69	11.8	0.2	2	20	417	435	416	437	0.94
9	31	6.2e-05	0.0064	18.2	2.9	1	23	462	484	462	484	0.99
10	31	0.53	54	5.8	0.1	1	23	507	529	507	529	0.97
11	31	0.034	3.5	9.5	0.3	2	19	534	551	533	555	0.90
12	31	6	6.1e+02	2.5	0.4	3	23	563	586	561	586	0.71
13	31	0.00076	0.078	14.7	4.4	1	23	592	614	592	614	0.97
14	31	0.00018	0.018	16.7	1.7	1	23	620	643	620	643	0.95
15	31	0.047	4.8	9.1	0.1	2	21	655	674	655	675	0.93
16	31	0.00013	0.013	17.2	0.4	1	23	691	713	691	713	0.95
17	31	1.2e-05	0.0013	20.4	0.3	1	23	719	741	719	741	0.98
18	31	0.00035	0.036	15.8	2.5	1	23	747	769	747	769	0.99
19	31	0.00092	0.094	14.5	0.8	1	21	775	795	775	796	0.95
20	31	1.5	1.6e+02	4.3	0.4	2	20	888	906	887	908	0.88
21	31	0.00029	0.029	16.1	0.9	3	23	934	954	932	954	0.96
22	31	0.39	40	6.2	0.0	1	23	975	997	975	997	0.97
23	31	6.9	7e+02	2.3	0.1	2	23	1002	1023	1001	1023	0.92
24	31	7.1	7.3e+02	2.2	0.3	2	23	1029	1053	1028	1053	0.79
25	31	2.6e-05	0.0027	19.4	3.0	1	23	1059	1081	1059	1081	0.98
26	31	0.001	0.1	14.4	3.2	1	23	1087	1110	1087	1110	0.95
27	31	0.014	1.5	10.7	1.4	2	20	1122	1140	1121	1142	0.95
28	31	8.3e-05	0.0085	17.8	0.2	1	23	1156	1178	1156	1178	0.95
29	31	2.4e-06	0.00025	22.6	0.6	1	23	1184	1206	1184	1206	0.97
30	31	0.00049	0.05	15.4	2.0	1	23	1212	1234	1212	1234	0.99
31	31	0.00043	0.044	15.5	0.8	1	21	1240	1260	1240	1261	0.95

Sequence Information

Coding Sequence: ATGGAGACTGATTGCCAAATAAAAAAGAATCCACCAAAGCGGAGAACTAACCCAACATCTAAAGCAAAGTCACTAGCCACGGCAAAATCCCTCTTAAGCAAACTGCCTCATATCCGAACAAAAATTATCGTCAAATCAAAAAGAAATgtgaaaacaacaaaaaatacgaGAACACTTAGACAAAGGGGAAGTAAGTCCAAACATGCAGATAATTCAGAGAAAAAATGCTTCTGGCCCTGTTCGCAATGTCCTCAGATATTTTCTTCTGAAGTCAGGCTCGGTGAACACCTCTTAAAATGTAGTAGAAATATTGCAGAAGTATTTATGAAACCCAAAAAGAAAAAGGTGGAGTCAAAAGCTCCCTCTCCTTTTGATCCTTATCATTTTGACAGATTTAAGAACGTCTATATATGTAACCGTTGTCTAAAAGAGTTTAACGTAAAGTCATCTGTAGAAGAGCACATAGAGGAGGATCATCCCGGATTTAAATGCAGTGCTTGTACAAAAGCTTTTGAGTCTATCGTGGACTTAGGATATCACAGCATCGTTCACAGCAAGGCCAGAGAAATGACGTGCCCTTGCtgtgattttaaaagtacagTCAAGTCGAAAATGGCTTTCCACATTCAAACCGAACATGTGAGTAGCTCGGAGTTAATAAATGCTCAAGATGTCAACTTTACTTGTGTAGTTTGTGGCAAGACTTTCTACAATCGCAGAAAGCTCTGGCACCATCAAAAGAACTATCACAAAGCCACGGTGGACATGTTACCGTCTATGGGTGCCCGCTTGGACGGACCTGTTACAAAAGCAGCCTCGACTGTTCCGAAAGTATACCTTTGTGACACTTGCGGAAAAAACTTCAACTCCAAGTATCGTTTGGAACGCCATCAGCGAGCAATGCACCAGGGGCTTAAGCCGTACATATGTCGATTCTGTGGTAGAGCTTTCACAGGAAAAGATACGATGCAAAAGCACGAGCGTATCCATACAGGGGAGAAACCTTACTCGTGCGAGTACTGTGGAAAGTGTTTCAGACAACCAGGACCGATTAAAAAAGAGAACAAAAAACATATTGTAAGAAGAACCAGATCTAGTAacattaaaaaagaatttaaagaaGAAAGCGAAGACGAAATTGATCTCTTATCCAGAATTAAGTTTAGGGAAATTCCAAAAGACTTAGAGGAAGACGACGAATTGacgaagaaaaaaaagaaaacacgaATCTTCGGTGTTAAATCTTGGAGGTGCGAAGTTTGCCAGGAAGTTTTTTATGATTCAAAGCTATGGCAACGGCACATACACCAAAGAGATTGCACGTTTGAACCTTTGAAAGGGAAGTGGGCTGGTCCTTCTAAAATGCCAAACAAAGCACGTGTATACACATGTAAATATTGCGAAACCGCCTTCAAAACCTTAAAGTTATTGAAGATTCATAAAAAGACTCATAAGCCTGACATAGAGGAGCCAGAAGAAGAACCACCAACATACAAATTTGATAATCTCCAGGATCTGTACATATGTAGCGTATGTTCAGCAGAGTTCCAAGAAGAATCTGAAGCTAAAGATCATGTCAAGAAACATCAAGAAATAATTACTTGTAAAGAATGCGAAGAATCGTTTAAGAGTTATTACGATCTTGGAATGCACTCTCCTACGCATGATCCACACCACAAAGTCCACTGTCCACTATGCTCGTATGTATCTTCCACTGCAAATAGCTATAGTTTTAAAGCTCATATAAACTACGTTCACTTTAAAAAGTTTCCATTTCATTGTAAGGATTGCGACAAAGGATTTAAACAATACAAGACCTATCGCGAGCATCAGAACGCTCACTCAGGAGAGAAACCCTATGTATGTGTAGTTTGTCAGAAGGGTTTTACTCACCAGAAGTACTTGCAAGTTCACCAAGTCAGAAATCATCAGGTTGGTACCACTGGCAACAAAATAGAAAACGAATGTCGCACTTGCAACAGATACTTTTACAAACCAGAAGCTCTCAAAGAACACATTGAAGTATgttacaaaaagaaaaaagttaaaagtgCCACCCCGGCCAAAGCGTTTCTTTGTGACACATGCGGACAGACGTTCACAGAGAAAGCCAAGCTGTTGGAGCATCTCAGAGTGCATAAGGGTGATCTTCCTTTTGTGTGTACGTGGTGCGGTAAACGATTTCCTGTTAAGGCATATCTAAAGACTCACGAGAGAGTTCATACAGGAGAGAAGCCCTATTCCTGTGAGTTTTGTGGGAAGAGATTTGGACAGCATGCACCTTTTAGagTCCATAGACGTACACATACAGGAGAACGACCCTATGTGTGTGATTTTTGCAACAAGGGCTTTACTACCAACCAAGGCCTGAAGCTGCATAAAAAGAATTGCCCAGATAATCAAGTTATTAAAATGCTGAACTCGAATCCGATGAATTCAAATTCGGGACCGGCGTTGCCCACGCCCAAAATGGAAATTCTTGCGCCGAAAGTGGAAGACCAgaaaaaaatggcaaaaaagaaaaaccttttaaattctaaaattcGACGTTCCACTAGACCACGAGCCAAAAAACGAAAGCCTTTAATAGAAAGTGATGATgagtttttgataaaaaaaataaatcatattaaaaaaattaaaatcggtACAAAGACTTGGAGTTGCGAAGTATGTCAAAAGGCTTTTCTCAAAAAGAAGCTTTACGAACAACACAAAACAAGTGGCGATTGCTTATTTATACCGAAAATTAAAATCGAGAAATCCCCTAAAGCACATCGTAAGGAAATTATATGGGATTGCAAGTACTGTAACGAACCGTTCACCAATCTAAAGCTCTTGCGAGATCATAAAAAATCTCACAAGGTTGAAGAGATTCGAGAAGAGGAACCATCGTTTAAGTTCGATGAGCTTCAAGATCTATATATCTGCGAAGTATGTTCGGCCGAATTCCAGAAACCAGACGAAGCGGAAATACACGTTAAAAACCACATAACTGGGCTGAAATGTGAGTTCTGTCAAGCATGGTTTAGAACACCTTTTGAGTTAGGAATGCACTCAATAGTTCACGATAACAAATGCATTAAGTGTCCTCTTTGCAGTTACGTTAACAAAAGTGCTAATCAATATAGCTTCAAAGCACATCTCAACTATATGCATCTAAAAAGATTTCCTTTTTACTGTAAAGAATGCGGCAAAGGATTCAAGCAATATAAAACCTACAACGAGCACCAAAACACCCATACTGGTATAAGGCCTTACGTGTGCACGGTATGCGAAAAAACCTTTacctttcaaaaatgtttagtgaCGCACCAAGTTAGGAGTCATCAAGTTTCCACTAATGGCAACCGAATGGAAAACCAATGCCGTAGATGTCATAGGAACTTCAAAAATTCTGAGTCTATGCAAGAACATATGGACGAATGTTACAAAAAGAGAAAAAGTTCGAAAAAACCCAACTCTTTCCTTTGCGAAACTTGTGGACAAGGATTTATCGAAAAGGCAAAACTCCAAAAACATATAAGAGTCCATTTAGGTGATCTACCTTTTGCATGTAACTGGTGTGGTAAAAAATTCCCTCAAAAGGACTACCTCAAAACTCACGAGCGGGTTCACACTGGCGAAAAACCTTACTCCTGCGAGTTTTGTGGAAAACGTTTTGGTTTTCACGCCCCCTTCAGGGTGCACATCCGGACTCATACCGGAGAGAGGCCGTACGTTTGTAATTTTTGCGATAAGGGCTTTACAACTAACCAAGGGTTGAAGttgcacaaaaaaaattgtcctgaAAATCAGTTGAACAAGATGTTAAGCGCAGAGGGGGTCGGATATTTGATTATGAAGTGA
Protein Sequence: METDCQIKKNPPKRRTNPTSKAKSLATAKSLLSKLPHIRTKIIVKSKRNVKTTKNTRTLRQRGSKSKHADNSEKKCFWPCSQCPQIFSSEVRLGEHLLKCSRNIAEVFMKPKKKKVESKAPSPFDPYHFDRFKNVYICNRCLKEFNVKSSVEEHIEEDHPGFKCSACTKAFESIVDLGYHSIVHSKAREMTCPCCDFKSTVKSKMAFHIQTEHVSSSELINAQDVNFTCVVCGKTFYNRRKLWHHQKNYHKATVDMLPSMGARLDGPVTKAASTVPKVYLCDTCGKNFNSKYRLERHQRAMHQGLKPYICRFCGRAFTGKDTMQKHERIHTGEKPYSCEYCGKCFRQPGPIKKENKKHIVRRTRSSNIKKEFKEESEDEIDLLSRIKFREIPKDLEEDDELTKKKKKTRIFGVKSWRCEVCQEVFYDSKLWQRHIHQRDCTFEPLKGKWAGPSKMPNKARVYTCKYCETAFKTLKLLKIHKKTHKPDIEEPEEEPPTYKFDNLQDLYICSVCSAEFQEESEAKDHVKKHQEIITCKECEESFKSYYDLGMHSPTHDPHHKVHCPLCSYVSSTANSYSFKAHINYVHFKKFPFHCKDCDKGFKQYKTYREHQNAHSGEKPYVCVVCQKGFTHQKYLQVHQVRNHQVGTTGNKIENECRTCNRYFYKPEALKEHIEVCYKKKKVKSATPAKAFLCDTCGQTFTEKAKLLEHLRVHKGDLPFVCTWCGKRFPVKAYLKTHERVHTGEKPYSCEFCGKRFGQHAPFRVHRRTHTGERPYVCDFCNKGFTTNQGLKLHKKNCPDNQVIKMLNSNPMNSNSGPALPTPKMEILAPKVEDQKKMAKKKNLLNSKIRRSTRPRAKKRKPLIESDDEFLIKKINHIKKIKIGTKTWSCEVCQKAFLKKKLYEQHKTSGDCLFIPKIKIEKSPKAHRKEIIWDCKYCNEPFTNLKLLRDHKKSHKVEEIREEEPSFKFDELQDLYICEVCSAEFQKPDEAEIHVKNHITGLKCEFCQAWFRTPFELGMHSIVHDNKCIKCPLCSYVNKSANQYSFKAHLNYMHLKRFPFYCKECGKGFKQYKTYNEHQNTHTGIRPYVCTVCEKTFTFQKCLVTHQVRSHQVSTNGNRMENQCRRCHRNFKNSESMQEHMDECYKKRKSSKKPNSFLCETCGQGFIEKAKLQKHIRVHLGDLPFACNWCGKKFPQKDYLKTHERVHTGEKPYSCEFCGKRFGFHAPFRVHIRTHTGERPYVCNFCDKGFTTNQGLKLHKKNCPENQLNKMLSAEGVGYLIMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -