Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000783.1:208234-221385[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00046 0.048 15.4 4.6 1 23 95 118 95 118 0.96

2 28 5.7 5.8e+02 2.6 2.3 2 23 221 243 220 243 0.94

3 28 0.00031 0.032 16.0 3.0 1 23 249 271 249 271 0.98

4 28 4.2e-05 0.0043 18.7 0.3 1 23 277 299 277 299 0.97

5 28 3.2e-05 0.0033 19.1 3.7 1 23 305 328 305 328 0.94

6 28 8.7e-07 9e-05 24.0 0.7 1 23 336 358 336 358 0.98

7 28 0.00088 0.09 14.6 4.4 1 23 364 386 364 386 0.98

8 28 2.4e-06 0.00025 22.6 1.7 1 23 392 415 392 415 0.98

9 28 2.4e-05 0.0024 19.5 0.3 2 23 430 451 429 451 0.97

10 28 6.5e-05 0.0067 18.1 0.9 3 23 459 480 457 480 0.96

11 28 0.00047 0.048 15.4 2.1 1 23 547 570 547 570 0.97

12 28 0.0002 0.02 16.6 1.9 1 23 673 696 673 696 0.95

13 28 0.0024 0.25 13.2 1.0 1 23 702 724 702 724 0.99

14 28 9.5e-06 0.00098 20.7 1.2 1 23 730 752 730 752 0.97

15 28 6.5e-06 0.00066 21.3 2.3 3 23 760 781 758 781 0.93

16 28 2.2e-06 0.00023 22.7 0.2 1 23 789 811 789 811 0.98

17 28 2.5e-05 0.0025 19.4 2.2 1 23 817 839 817 839 0.97

18 28 0.0042 0.43 12.4 1.0 1 23 845 868 845 868 0.98

19 28 0.00023 0.023 16.4 1.5 1 23 947 970 947 970 0.96

20 28 0.007 0.71 11.7 4.6 1 23 1068 1091 1068 1091 0.97

21 28 0.001 0.11 14.3 1.7 1 23 1097 1119 1097 1119 0.99

22 28 2.3e-05 0.0024 19.5 0.5 1 23 1125 1147 1125 1147 0.98

23 28 5.6e-06 0.00057 21.5 1.4 1 23 1153 1176 1153 1176 0.93

24 28 1.3e-05 0.0014 20.3 0.7 1 23 1184 1206 1184 1206 0.98

25 28 0.01 1.1 11.2 1.2 1 23 1212 1234 1212 1234 0.96

26 28 7.8e-06 0.0008 21.0 2.3 1 23 1240 1263 1240 1263 0.98

27 28 5.9e-06 0.0006 21.4 0.4 1 23 1277 1299 1277 1299 0.97

28 28 0.0022 0.23 13.3 2.3 3 23 1307 1328 1305 1328 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00046	0.048	15.4	4.6	1	23	95	118	95	118	0.96
2	28	5.7	5.8e+02	2.6	2.3	2	23	221	243	220	243	0.94
3	28	0.00031	0.032	16.0	3.0	1	23	249	271	249	271	0.98
4	28	4.2e-05	0.0043	18.7	0.3	1	23	277	299	277	299	0.97
5	28	3.2e-05	0.0033	19.1	3.7	1	23	305	328	305	328	0.94
6	28	8.7e-07	9e-05	24.0	0.7	1	23	336	358	336	358	0.98
7	28	0.00088	0.09	14.6	4.4	1	23	364	386	364	386	0.98
8	28	2.4e-06	0.00025	22.6	1.7	1	23	392	415	392	415	0.98
9	28	2.4e-05	0.0024	19.5	0.3	2	23	430	451	429	451	0.97
10	28	6.5e-05	0.0067	18.1	0.9	3	23	459	480	457	480	0.96
11	28	0.00047	0.048	15.4	2.1	1	23	547	570	547	570	0.97
12	28	0.0002	0.02	16.6	1.9	1	23	673	696	673	696	0.95
13	28	0.0024	0.25	13.2	1.0	1	23	702	724	702	724	0.99
14	28	9.5e-06	0.00098	20.7	1.2	1	23	730	752	730	752	0.97
15	28	6.5e-06	0.00066	21.3	2.3	3	23	760	781	758	781	0.93
16	28	2.2e-06	0.00023	22.7	0.2	1	23	789	811	789	811	0.98
17	28	2.5e-05	0.0025	19.4	2.2	1	23	817	839	817	839	0.97
18	28	0.0042	0.43	12.4	1.0	1	23	845	868	845	868	0.98
19	28	0.00023	0.023	16.4	1.5	1	23	947	970	947	970	0.96
20	28	0.007	0.71	11.7	4.6	1	23	1068	1091	1068	1091	0.97
21	28	0.001	0.11	14.3	1.7	1	23	1097	1119	1097	1119	0.99
22	28	2.3e-05	0.0024	19.5	0.5	1	23	1125	1147	1125	1147	0.98
23	28	5.6e-06	0.00057	21.5	1.4	1	23	1153	1176	1153	1176	0.93
24	28	1.3e-05	0.0014	20.3	0.7	1	23	1184	1206	1184	1206	0.98
25	28	0.01	1.1	11.2	1.2	1	23	1212	1234	1212	1234	0.96
26	28	7.8e-06	0.0008	21.0	2.3	1	23	1240	1263	1240	1263	0.98
27	28	5.9e-06	0.0006	21.4	0.4	1	23	1277	1299	1277	1299	0.97
28	28	0.0022	0.23	13.3	2.3	3	23	1307	1328	1305	1328	0.96

Sequence Information

Coding Sequence: atgtcgGAAATATGTTGTATCTGTCTCGAGAAAgctatatttttccaaaaagtaACCGAATGCATATTTGATACAGAAAAGTGTGTTGTAAAGTTGAATACTTGTTACCCCAATGAGatTTGGGATGAATCTTTCAATATTTGTAATGACTGTGTAGATAAACTTGATAGGGCATATAGTTTCTTACAATTATGCCTAAAGAGTCATGAATGGCGAATGGAACAGTTAAGggcaatagaaataaaaaaggaGGAACAGTGTAAAGAAGAACTTACAACTGATTTTACTTGTCACCATTGTGGCAAATCATTCAGattGAAACGAACTCTAGGTCTTCATATAACAAGAATTCACACTAGACcgaagaaaaatgtaaaaagaaagtTAGCTGTGGAAAAATCTGAATTAGCTGATGGAAGTGAAATAAAAAGAGAATATTATACTGATTTAGATGTACGTCTAGCAGACAATGAAAATTTCGAAACTAGAAGCAAGAATAAAGTTAAATCAGAAAGTGGAAAAGAAAAtgtggaagatataactgattttgaagataatgcCAATGATGACGTTGGTAACTATTCAAGtGAGGATGATATGTTTAAAGAAAAGAAACCTTACAAGGGGAAGAAACGAGGCCCAAAATGTAAAGGTCCCATTCAGTGCAAGTTCTGCGAACTTGTTTTTATGAGAACAGACAAGCACATACAACACGTGAGGTCAAAACATACATTTGAAAAACCTTTCCAGTGCAACTTGTGTGATGCTAAATATTTTAGCCCACACAATCTCAAAATCCATACAAGAAAACATACGAACGAGAAACCATATGTTTGTTCATCGTGTGGCAAAAGTTTTATCTCTTCAAATGATCTGTGGCAACACAACAAAATACACGAAAAAGTGAGGCAGTATGTTTGCAATGAATGCAGCAGAAGCTTTAAAACTCATAGTAATTTAAGaaCTCATAAACTACAGATGCATCAAGACCCGGGAATGTGGAAATTTGTTTGTACAGTATGTGGGAAAAAATTTCCACTTAATAATAATCTGGTCAAACATATGCGGCGACATGAAGgtaTCAAACCATTCTCTTGCCATCTTTGTCATAAAAAGTTTGTGGAAAAGATCGACCTTCAAACGCACCTTCTGAGTCATTCTGATGAACGGCTTTATAAATGTAATATTTGTGGAAAAGCTTATAAGAAAAGCGAGACGCTCAGAAGACACTCGAAAACTGAACATGATATCGGTAACTTTGTAGtgaAGCGACCCGAGAAAAAGTTAAGCTGTCCCATGTGTCCGAAGATATTTGCGTTCAACAACAAACTACAAAGGCACATTTTAACCCATACGGGGGAAAAACCGGTCAACTGCGAATACTGCGACAAGAGGTTTCGGGACAACTATGATAGAAATGTTCATCTTAGGAAGGACCATAACGTTGAACCGGTTGAGGCGAAAAATttgTGGGAAGAATCCTTCAATATTTGCAATGACTGTGTTGAAAAACTGGATGGTGCTTACAATTTCGTTCAGCTATGTCTTAAAAGTCAAGAATGGCGAAAAGAGCAGATGACCCTTATAGGAGTCAAGAACTCACTATTGATAAGACCTAAAAAGGAATCCTCAATTGGTTTTACTTGTTATCAATGCAGCAAATCATTtagATTAAAAAGTACATTAAGTATTCACATAACCAAAATACACACcagatcaaaaaaaaacataaaagaaaaatctCTAGAGGTCAAATATAAAACTGATATTAACAGTAAATCTAAAAAGGACGAGAAGAAACTAGATATTTGTTTAGAGGACAAAGGAAATTTGGAAATTCTAGAgaataaattagaaattaaatatgATAAACCCTTTAAGTTAGAAAATGAAGAAGAAAATAATGATTCAAGTAGTTATGAAGTTTACGAtcatgaaaataattatttaagTGaagaagaaataaaagaaaaaaagggtaAAGGAAAAAAGCGAGGCCCCCCTACTAAAGGCCCCTTCATATGTGATACTTGCAATCTAGTTTTTAACAGACCTTACAAGCTTAAACATCATGTTAGGGCGAAACACACCTTTGAAAGACCCTTTAAGTGTGAATTGTGTGATGCAAAATATTTGAAACGAGATTCCCTGAATGTCCACATGAGAAAACACAACAATGAGAAACCTTTCATATGTTCGACTTGCGGCAAGAGCTTTGTTACATCGAGTGACATAACACGTCACAACAAGACTCATGAGGAAGTGAGACAGTACGGCTGTACTGACtgcaataaaagttttaaaaccaaaagtaatttacgGACCCATAAACTACAAATGCATCAAGATCCAGGAATGTGGAAATTTATCTGTACAGTTTGTGGCAAAAGATTTCCATTAAACGACGCTCTCGTGAAACACATGCGTCGACATGAAGGCATCAAAGACTTTGCTTGCCACTTGTGCAACAAGAAATTTACAGAAAACGGCGAGCTGCGCAGACATCTGCTCAGTCATTCTGACGAACGCAACTTCAAATGTAACCTATGCGAAAAAGCGTACAAGAAGAAAGAAATTCTCAATATACACTTGAAGAGGGACCACGGTATCGGGAATTGTGTAATAAGGCAACCGGAGAAAAAATTTGCTTGTCCTTTGTGTCCGAAGATCTGGGATGAGTCCTTCAATATTTGCAATGACTGTGTGGATAAACTTGATAGTGCATTTAGTTTTGTAGAGCTGTGTATAAGGAGTCAGGAATGGCGCAAAGAACAGGTTTCACATATAGAAATACAACATTCTTTACTAATAAAACCTAAAAACGAACCGGCAACTGATTTTACTTGTTTCCTATGTGGCAAATCTTTTAAGCTGAAACGTACTCTTAGTATTCACATAACAAGGATACACACCAAAAAGAATGACAAAAAGAATTCTGCAAGAAAAAGATCTGAAACTGAGATTGCAGTTAAGATAGAAAATAATGAGCTACATTCTACCTTGGATGTTGAATTTGAAGAGAAATTTGAAATAGTgcatgaaaataaacttaagacagaaatagaaaatgcaaaggaagataaaaataatagcaGTTTTGAAGATAATGGTtgtgataataattattcaagTGAAGAAGAGacagttacaaaaaaaaaaacatataaaggAAAGAAACGGGGATACAAAAGTAAAGGTCCTTTCAAGTGTGACTTCTGCGAACTCATTTTTCCAAGAACCCACAAGCTGAAACATCACATCAGGGCAAAACACACTTTTGAGAAGCCTTTCAAGTGCAAACTTTGTGATGCAAAATACCTGAATCAGAGTTACCTGAGTGTCCATATGAGAAAACATACAAATGAAAAACCCTATGTATGCTCGACGTGTGGGAAAACTTTCATCTCAACCAATGATCTGTGGCGGCACAATAAGATTCACGATAGTATCAGACACTATGCTTGTGATGAATGCGACAGACGTTTTAAAACCAATAGTAATTTAAGaacccACAAACTACAAATGCATCAAGATCCTGGAATGTGGAAATTCATATGTACAGTGTGTGGACGAAGGTTTCCTCTAAACAATACTCTTGTGAAACATATGAGGAGACATGAAGGAATCAAGGACTTTGCCTGTCACCTTTGTGACAAGAAGTTTATAGAAAACGGCGAGCTTCGCTTTCACCTTCTCAGCCATTCCGATGAACGCAACTACAAGTGCAATCTCTGTCAAAAAGCGTACAAAAAAAGCGATAATCTCAGTAGACATTTGAAAAGAGACCATGATATCGGTAAGCGGGTACTGAAGAAACCCGAGAAGAAATTCGCCTGTCCGATGTGTCCGAAAATGTTTGAATACAACAATAAGTTGCAGAGGCATATTTTGACGCACACAGGCGAGAAGCCGGTGCACTGCGAGTATTGCGAAAAGAGGTTCAGAGATAACTATGACAAAAGCATTCATCTGAGAAAGGATCATAATGTGGAGCCGAAGACTTTGATGTCTGGCTAG
Protein Sequence: MSEICCICLEKAIFFQKVTECIFDTEKCVVKLNTCYPNEIWDESFNICNDCVDKLDRAYSFLQLCLKSHEWRMEQLRAIEIKKEEQCKEELTTDFTCHHCGKSFRLKRTLGLHITRIHTRPKKNVKRKLAVEKSELADGSEIKREYYTDLDVRLADNENFETRSKNKVKSESGKENVEDITDFEDNANDDVGNYSSEDDMFKEKKPYKGKKRGPKCKGPIQCKFCELVFMRTDKHIQHVRSKHTFEKPFQCNLCDAKYFSPHNLKIHTRKHTNEKPYVCSSCGKSFISSNDLWQHNKIHEKVRQYVCNECSRSFKTHSNLRTHKLQMHQDPGMWKFVCTVCGKKFPLNNNLVKHMRRHEGIKPFSCHLCHKKFVEKIDLQTHLLSHSDERLYKCNICGKAYKKSETLRRHSKTEHDIGNFVVKRPEKKLSCPMCPKIFAFNNKLQRHILTHTGEKPVNCEYCDKRFRDNYDRNVHLRKDHNVEPVEAKNLWEESFNICNDCVEKLDGAYNFVQLCLKSQEWRKEQMTLIGVKNSLLIRPKKESSIGFTCYQCSKSFRLKSTLSIHITKIHTRSKKNIKEKSLEVKYKTDINSKSKKDEKKLDICLEDKGNLEILENKLEIKYDKPFKLENEEENNDSSSYEVYDHENNYLSEEEIKEKKGKGKKRGPPTKGPFICDTCNLVFNRPYKLKHHVRAKHTFERPFKCELCDAKYLKRDSLNVHMRKHNNEKPFICSTCGKSFVTSSDITRHNKTHEEVRQYGCTDCNKSFKTKSNLRTHKLQMHQDPGMWKFICTVCGKRFPLNDALVKHMRRHEGIKDFACHLCNKKFTENGELRRHLLSHSDERNFKCNLCEKAYKKKEILNIHLKRDHGIGNCVIRQPEKKFACPLCPKIWDESFNICNDCVDKLDSAFSFVELCIRSQEWRKEQVSHIEIQHSLLIKPKNEPATDFTCFLCGKSFKLKRTLSIHITRIHTKKNDKKNSARKRSETEIAVKIENNELHSTLDVEFEEKFEIVHENKLKTEIENAKEDKNNSSFEDNGCDNNYSSEEETVTKKKTYKGKKRGYKSKGPFKCDFCELIFPRTHKLKHHIRAKHTFEKPFKCKLCDAKYLNQSYLSVHMRKHTNEKPYVCSTCGKTFISTNDLWRHNKIHDSIRHYACDECDRRFKTNSNLRTHKLQMHQDPGMWKFICTVCGRRFPLNNTLVKHMRRHEGIKDFACHLCDKKFIENGELRFHLLSHSDERNYKCNLCQKAYKKSDNLSRHLKRDHDIGKRVLKKPEKKFACPMCPKMFEYNNKLQRHILTHTGEKPVHCEYCEKRFRDNYDKSIHLRKDHNVEPKTLMSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -