Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000119.1:3276677-3283374[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.8e-08 6.7e-06 27.0 0.0 1 42 74 115 74 116 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.8e-08	6.7e-06	27.0	0.0	1	42	74	115	74	116	0.94

Sequence Information

Coding Sequence: ATGAATGCAACTGACCAAGTGCAGAAAAAAAACGAATTCCAAAACTTACAAGAGGAACTAAATTTTTTGAGTTATGATGCTTTATTAGATTTCGATGAAAAATTGAGGGATATGGAGTATTTTGACAtgatgATGGCAAATAGTAGCAAGAAAATCGCAAATAAAAGGAAAGTTCGTGAAGGTCGCGTAGTTAAGAAGAAAAggtgtttctttaaatattccGAAGAAAAGTTGATTATGGCTCTACGCGAAATACGCGAGAACAATCTAAAAGTTAGGGAAGCAAGTAGACTATATGAGGTTCCAAGAAGTACAATTCAAGATCATCTTAATGGAAAAATTCCCAAAATTTCCAGAAAAACTGGACCGGAACCACTTCTATCTAACGcagtggaaaaaaaaattgttgaatgGATTATAACTATGGCAAAATGTGGGTTTCCCATAAAAAAATGTGATCTTATGGCTACCGTCGAATGCATTATTAaggatttacaaaaacaacacCTTTTTAAAAACGGCAAGCCCGGTGAACGATGGTATGCTAATTTTTTAAGGCGGTACCCGGAAATATCTTTGCGGGAAGCCGAATCAATAAACAAAGCAAGAGCTGTTATTACTGAGGAATCCATAAGGTTGTGGTTTagagaactaaataattttttaactgaccataattatttagaaatatttgacgATCCAAGTCGTGTTTTTAACGGCGACGAATCTGGTTTTTCTATGTGCCCCAAGACCGGCAAAGTCTTGGCACCAAGAGGCTGGAAAAATCTTTACCAAATTAAGAAAGGACAAGAAAAAGAAAACCTTACGGTACTAATCGTTTTCAGTGCGAGCGGGAAACTTTGTCCGCCTTTAATAATATTCCCTTACCTTAGGCCACCCAAGCAGTTAGTAGATACTATGCCAGAAAACTGGGTATTAGGTCGATCCGATTCAGGATGGATGAAATCGGACGTGTTCTATGAGTACATAGCAAACGACTTTTCCAAATGGTTATTAGAGAATGAGGTAAAAAAACCTATCATCCTTTTTATAGATGGTCACCGATCCCATATGACCATGGCTCTAAGTGAATTTTGTGATCAAAATGACATCATACTTTATGGACTTCCACCCAATACAACACACATCTTGCAACCCGCGGATGTCAGCGTATTTAAGCCCATGAAGACAGAGTGGAAAACTACGGTCAGAAAGTGGCAGAATCAACCGGAAAATATTAATTGCTCAATAACGAAACTAAATTTCTGCCAAGTCTTCCAGGAATGtcttaataatatcaatatgACCAACTATATGATCAATGGTTTCCGGAAGTGTGGCCTTTTTCCGTTAAACCCCGACAATGTGGATTACACGAAGTGTGTAAGAAAcactttagaaaaacacactacTGGACCTACGCAGGATTTAGCAGAACCACTATCGGCAGACAATATTAAAGGTTCCAAAAAGGTTTTGGAAACAATTCGCGAAAAATTAGGTAGTTACGGGATCAACGTTGATGTAATTATGGAAGAGATTAACATTTTGGAGCTAAGTATTTCTTCTACAGAAGTGACCCTGCCGAATGACATCTTTGTGACTCACCAGCAAAGATTAGAAGTCCCTCTTTCTAACATTACAGACGTCGTTCCAGATATTATAACTGGATCATATGTAAACATGGATAATATTGACATAATTCCTGTACAGAATATTATCTGTATGCCCATAGGCGATAAAGATAAAGATTTCCACGTCGAACCCAGGGATATCATGCCTGAAAAAACATTAACTTCTCATGAGGAAACCGATACCGAATTCAATCTAGAGTCCCATCAGCAGGTGATACCTGAGATACTTCCACCAACTTCCTATCATAATGAAAAGGACACAGATACTAAGCTTAACGCAGAGCCTTGGGAGATTACACCTGAAACACTACAATCAAGTTCTCATAATGAAAAGAACGCAAATACCGAACTCAACGTAGAGTCCAAGGAGACTATAACTGAAACACTACCATCAACTTTGCAAAATAAAACAGataccaacttcaaCGTAGAGTCCCGGGAGGTAATACCTGAGTCGGTACCAACGTCTCGCGATGAAAAGGAAACAGTTTTACAACACCAATCTAGTGAAGAATTAATACAAAAATCACTTTCAGACACTAACCAATCTCATGATAAAAATCAAGACTCTTTTGTTCGTCATTTGATGTATCCAGAACCCGTAACATATAAGAAGAAAATCAGCAACAACGAAAAATTACCAAGCGCTATTTCAACTGTAGATTGGAGGAGACATTACGAGGAAAAGGACagtgttaaaagaaaaaaggcagaggaaattgaaaaaagaaaacagaaaagaaTGTCTGCCCAAAAACTTCGattaacagaaaaaaagaaaatcaatTCCAAGGTAAAAATGATCGTTAggcaaaaatacaataaaaggAACGTCAAAAAAGCAGACAATGTTCAAGATAGCGCTCACAAAGAGACTGCAAGTaaggaaaaaacaaaatgtattacTTGTAATGAAGATTTATTAAGTGATACAGAAATAGACGACGAAAAAAACATTGGATGTGATAAGTGCACAAATTGGTTTCACTTGAGATGCACAGAGTTTATTGGAATGACGTACATTGAAGCAGCATCAAAAGATTATAGTTGTTTTTGTTGCTCGTAG
Protein Sequence: MNATDQVQKKNEFQNLQEELNFLSYDALLDFDEKLRDMEYFDMMMANSSKKIANKRKVREGRVVKKKRCFFKYSEEKLIMALREIRENNLKVREASRLYEVPRSTIQDHLNGKIPKISRKTGPEPLLSNAVEKKIVEWIITMAKCGFPIKKCDLMATVECIIKDLQKQHLFKNGKPGERWYANFLRRYPEISLREAESINKARAVITEESIRLWFRELNNFLTDHNYLEIFDDPSRVFNGDESGFSMCPKTGKVLAPRGWKNLYQIKKGQEKENLTVLIVFSASGKLCPPLIIFPYLRPPKQLVDTMPENWVLGRSDSGWMKSDVFYEYIANDFSKWLLENEVKKPIILFIDGHRSHMTMALSEFCDQNDIILYGLPPNTTHILQPADVSVFKPMKTEWKTTVRKWQNQPENINCSITKLNFCQVFQECLNNINMTNYMINGFRKCGLFPLNPDNVDYTKCVRNTLEKHTTGPTQDLAEPLSADNIKGSKKVLETIREKLGSYGINVDVIMEEINILELSISSTEVTLPNDIFVTHQQRLEVPLSNITDVVPDIITGSYVNMDNIDIIPVQNIICMPIGDKDKDFHVEPRDIMPEKTLTSHEETDTEFNLESHQQVIPEILPPTSYHNEKDTDTKLNAEPWEITPETLQSSSHNEKNANTELNVESKETITETLPSTLQNKTDTNFNVESREVIPESVPTSRDEKETVLQHQSSEELIQKSLSDTNQSHDKNQDSFVRHLMYPEPVTYKKKISNNEKLPSAISTVDWRRHYEEKDSVKRKKAEEIEKRKQKRMSAQKLRLTEKKKINSKVKMIVRQKYNKRNVKKADNVQDSAHKETASKEKTKCITCNEDLLSDTEIDDEKNIGCDKCTNWFHLRCTEFIGMTYIEAASKDYSCFCCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -