Pcer040868.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- -
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010001776.1:62459-63501[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 1.1e+02 3.9 0.0 25 41 38 55 37 58 0.86 2 2 1.2e-06 0.00011 23.2 0.0 9 42 69 103 62 106 0.87
Sequence Information
- Coding Sequence
- ATGAGAAGTTCAAGAATATTTAGTATTGACTTGCATCGTACTAGATATGGCCAAAATTCGGTCATTACCAGAATGATGCATGTTGTAAATGAGACTGAAATTGAAATGGATCTGTTTAATATTTCCGACAGCGCTTTAAAGGCCAGAGTGTATGAGAAAAGGACAGCAAGGGCTGATATAAATGAAAGGGCTATGAATTGTGGAATAGCAGATGTAATTGAAGAAAGACTGTCAATAAGAATAGCCGCTAAAACGTATAATGTAACAGCACCTACCTTGCAACATAGAGTAGAAAAAAGGAAGGCTGAAGCAAATAATGGAAAAATCTGTTAG
- Protein Sequence
- MRSSRIFSIDLHRTRYGQNSVITRMMHVVNETEIEMDLFNISDSALKARVYEKRTARADINERAMNCGIADVIEERLSIRIAAKTYNVTAPTLQHRVEKRKAEANNGKIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -