Pcer008136.2
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- -
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010000149.1:135374-135898[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 1.3e-08 35.7 0.0 1 35 18 52 18 60 0.90
Sequence Information
- Coding Sequence
- ATGCCGCGCCACTACAATAAGAAAATTGGGGGCCGTACAAACGGTAATTACACCCCCCAGCAATTAGAACAAGCGTTAGCAGCCATACGAGGGGGGATGTCCCAAGCCCAGGCGAGTCGCCGATTCAAAATCTCCCGTGGAACCCTTCAGAATAAGTTGTTTGGTATGCACACCAAGACAGTAGGTCATCCGATACTATTTACCCAAGAGGAAGAGCAGGTGGATATACGTGAAGTGTTACACAAATATCTCGAAAAACAAGGACGCAAGATGAAAGAATTTCGTAACAATACACCTGGACCCGATTTTGTTCAGCATTTCATATTACGAAATGATTTAAGTGTCCGCTTAGCTTCAAATATAAAACGTGCTTGTGCAGCTGTAGAATCACAAGAACTTAATGAGTTCTTCACAAATATTGAAGCAGTTTTAAGAGATGCAAATCCTGCCTTGGTTATTAATTATGACTAG
- Protein Sequence
- MPRHYNKKIGGRTNGNYTPQQLEQALAAIRGGMSQAQASRRFKISRGTLQNKLFGMHTKTVGHPILFTQEEEQVDIREVLHKYLEKQGRKMKEFRNNTPGPDFVQHFILRNDLSVRLASNIKRACAAVESQELNEFFTNIEAVLRDANPALVINYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01238564; iTF_01238610; iTF_01238526;
- 90% Identity
- -
- 80% Identity
- -