Pcer031442.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- Arid5a
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010000911.1:440763-449479[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 1.4e+04 -2.1 0.0 32 48 9 25 9 33 0.81 2 2 5.9e-23 4.5e-19 69.9 0.1 1 89 118 204 118 204 0.93
Sequence Information
- Coding Sequence
- ATGAAGCGTCTTGAAGGCGTCGAAAACCTTTATCTGAAATATAAGATCGTCAATGCCCTTGGAGGTTTTTACGTTATGCATCCCAATACTAgggtattgtTTTGCAAAGACACATTTGATTATCCCGAATTAGAGGGTCACGAATTACTTTGTAATCACCTAGCTCCTAAATTAAAAGGAAGGCCTAGAGGCAAACGGAAAAAACGCAGTATTTCCCCGGGATCAGAGAGCAATGAATCGGAGTCGTCTCTTACCAATCATTATACAAGGgctGCAGATTACAAATCTAATGGTGCCCGATCAGATTCGCCTATGGCTACCCGTCGAAGTACCAGATGTCACgaaaacaatgaaaataaacaattctTAAAGATTCTTTCTTCTTTTATGAAGTCCAAGCGTATGTCTATGGGTCGAGTTCCTTCTTTAGGATACAAAGAATtaaaccTGCATGAATTCTTTACGAAAGTTCAAAAATTGGGTGGATATGATTGTGTGACGACGAATCGTCTGTGGAAGTCAATTTTTGATGATATGACTGGCCATTTAAATAGTACAAGTGCAGCTACGATTATTAGACGACATTATGAAAgatttcttCTCGCGTATGAAAGACATCTAAAAGGCGAAGAACATAAACCTCTTCCTGTGTCCGAGAGAAGAAGGCTGAAGAGTAAAAGAGGTAGTTTGCCCTCTAGTAGCCGTACGAGTGACTCTGATTCGAGTATCGATGCACCGCCGTCAACATCTAGATCTAGTAGTACCCCTCCAGACAGTAATTATAATAAGGAATCAAGTCCACCAGGAAAAACTTCTTCTCTTAGAAGCATTCGTGTCAAACCAGAGAGACAGAAAGACAGACAATCTTCGGTTAGTGATAAAGTCAGTGCTAATAATCAAAGTAATATTGAACCAAACATTAAAACGGAACCTGACGACGTTAAGCCTGTTATAGACAATTCAGTGGTTAAAAGTGAAAGTACAGAAGTGAAAGTAAATGTTAAAGTCGAAGTTACGGTTGAAACTAAAGTGGAAATTAAGGTTGATAATGATAATAACGGAAAGGAAACAACAGAAGAGATAATAGTAAAAGACGTAAAAGCAGAAATAAAAGACGAAAACATTTTACCGAAGAGTGAACCGGATGAAATCAAGCCGTCAACGCCTGAGGGATCTAAATCTGAAGTATCCATTCCTGATAAAAGCATCGAGCCTGTTACTAGCGCTGTAGCTCCAGTCGTTGTTACGTCAATACCTGATCAAATGCCTTCTCCAGTTGAAGGCAAAGAAAATATTCTTGACATAAAAACTGGGGACGTTGCCACTGCTAATTCTTCTCCTGAAGTTGTCAATGTTCCTTTTAAAGCTAAAACTCCCGAGGTTGTCCAGATTGACTCTGATGCTTACAAGAAACTTGGTGATTCCTTCATTCATGATGTTAAGAGAATAAAACTTGATATCTTAAAAGAAGGAGGGTTGGAAGTTACACCTGTTAAATCAGGACTTGCTTCTCCGTTACTAAAAGATGTTCGCCCTTCTGTTATACAACCACCTTCGCACAACGATACTGCCAAAACCAGTATGCCACCTCCTTTGCTAAGTAGTGTTTTGCCAAAAAGAAATCACGTGTCGTCTCTACCCCCAAGCATAAATATTACACAAATAAAAGCTTCCCCTAGTACACCAGTCAAAGACAGTAAACCTGATAGTTTTCAATTTGTTAATGGTGCTACACCTCCTAAAGTTGTTCAATCAAAATCAATATACTCTTACTCGGAAAAGACTATTTATGGAAATCCCAAAGATATATTGCAACCTGTAATGGCACCTCAAACTCCTAAGTTTGTTGGATCTACTGTTAGACAAGGTGGTAGTGATCCAATGGACTTGTCAATTACCAGTCCTCAGAAGCCTATCATTGAAATATTGCGCATACCTCAAAGTTCTACCTCCAATACCCAAACGCCATACAATCGAGATAGTGTTACTAAAAATCTGTACAAAACATCTCCTCCTGTTTTAGAAGGTAGAAGGCTAGGTTCGAATCTGGAGATTACCCTAGTCGGACCAAAATCTTCTGTAAACCCGAGTTATGTACCGAAACCACCGTCCTCGCATAAACGCTCGAGCTCTGAAACGTACGCGCAGAAAATCGCTAAATTAAAAGCCGAAGAAAATAGTAATAGGCATAGTAGATACAGTTCTTCACACGGGCATAGAAGCAAAATGGAATTTCCAGTTCCCAGTCACTTTACTAAAGGCAGTGTGAGTAGTAGTGTCAGCAAAACAGACGTTCGACACGCTCCTCCAGTACAAAAACCTTTAGTTCCTCCATTGCCTCAAACGTTACCACCTTATATTGCAAGATTTGGCACACATGATAACACTAATGGGCTTAACCCATACCTGCCCCTTATGGACTCGTTGTATTACCAGGCAGCTTTACAGAATGTTTATTCAAACATTTCAAATATGTCCAGTATGCCTCCGCCCATGTTACCTCTTCCTACTCCTGAGCAGTTAAAATTTTATGCTGAACTTATGGCTCATGGTAGAATTAATTTTCCTTTTACGCTTCCTAATGATGGACATTCGTCCATGAACAACAGTAAGAAGCCATGA
- Protein Sequence
- MKRLEGVENLYLKYKIVNALGGFYVMHPNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSLTNHYTRAADYKSNGARSDSPMATRRSTRCHENNENKQFLKILSSFMKSKRMSMGRVPSLGYKELNLHEFFTKVQKLGGYDCVTTNRLWKSIFDDMTGHLNSTSAATIIRRHYERFLLAYERHLKGEEHKPLPVSERRRLKSKRGSLPSSSRTSDSDSSIDAPPSTSRSSSTPPDSNYNKESSPPGKTSSLRSIRVKPERQKDRQSSVSDKVSANNQSNIEPNIKTEPDDVKPVIDNSVVKSESTEVKVNVKVEVTVETKVEIKVDNDNNGKETTEEIIVKDVKAEIKDENILPKSEPDEIKPSTPEGSKSEVSIPDKSIEPVTSAVAPVVVTSIPDQMPSPVEGKENILDIKTGDVATANSSPEVVNVPFKAKTPEVVQIDSDAYKKLGDSFIHDVKRIKLDILKEGGLEVTPVKSGLASPLLKDVRPSVIQPPSHNDTAKTSMPPPLLSSVLPKRNHVSSLPPSINITQIKASPSTPVKDSKPDSFQFVNGATPPKVVQSKSIYSYSEKTIYGNPKDILQPVMAPQTPKFVGSTVRQGGSDPMDLSITSPQKPIIEILRIPQSSTSNTQTPYNRDSVTKNLYKTSPPVLEGRRLGSNLEITLVGPKSSVNPSYVPKPPSSHKRSSSETYAQKIAKLKAEENSNRHSRYSSSHGHRSKMEFPVPSHFTKGSVSSSVSKTDVRHAPPVQKPLVPPLPQTLPPYIARFGTHDNTNGLNPYLPLMDSLYYQAALQNVYSNISNMSSMPPPMLPLPTPEQLKFYAELMAHGRINFPFTLPNDGHSSMNNSKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186801;
- 90% Identity
- iTF_00195734; iTF_01239898;
- 80% Identity
- -