Plab017233.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- NFX1
- Assembly
- GCA_949318255.1
- Location
- OX439140.1:99332934-99343962[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.26 6.8e+03 -1.3 0.4 1 5 271 275 271 280 0.75 2 13 2 5.2e+04 -4.8 2.3 5 10 285 290 285 290 0.91 3 13 0.00015 3.9 9.1 16.9 1 18 296 313 296 314 0.98 4 13 1.3e-10 3.5e-06 28.4 14.5 1 19 323 341 323 341 0.98 5 13 2 5.2e+04 -4.6 0.8 9 11 378 380 377 382 0.78 6 13 0.0049 1.3e+02 4.2 5.6 10 18 387 395 384 396 0.90 7 13 0.012 3.1e+02 3.0 6.4 2 11 409 417 408 418 0.85 8 13 0.28 7.2e+03 -1.4 0.9 6 10 477 481 476 481 0.90 9 13 5.2e-06 0.14 13.7 6.9 1 12 487 498 487 498 0.96 10 13 2 5.2e+04 -5.9 2.8 6 8 514 516 511 518 0.52 11 13 0.0002 5.2 8.7 12.9 3 19 527 543 526 543 0.94 12 13 2 5.2e+04 -5.3 2.1 9 13 549 553 548 553 0.72 13 13 3.6e-05 0.94 11.1 11.6 1 18 594 613 594 614 0.91
Sequence Information
- Coding Sequence
- atgaaattCGATGAGCTAAAAGTTGAACAGCTGAAGAAAGATTTGGGCAAGTTGGATCTGCCTACTGGAGGAAATAAAGCTGAGCTGCAGGAAAGATTAATCGATGAATTTAAGCGACTTGATATTGATATCGCAGCTTATGAATTTGATGAAAAAGAAGAAATAGAAGTTGCTACCCGAACTGCGGCTGAAATTCTTGAAAGTGTACACGTAAGTTGCAGAAAAAATTATGATGACATTATGGTAGCTCTGCAACACAAGTATGGTGGTGAACACAGAAAAGAAATAATCAGAATGGAATTACGGGGTAGAGTACAAAAGGCCAACGAGATGCTACATGATTTCGCACTAGAGATTGATCGCTTGGTGCAGATTACTAATCCAGGTGAAAGTCATCCATTGCTGCATCATTTTAAGACCGTGACATTTGTAAACGGTATACGGGATGCTGATGTAAAACTAGCGGTGCGCAAGTTCGATATAACTGAAGATGACGAAAGAGATATTGTTAAGGAACTAAAGGACATGAAGGAATCAATTATGCAAGCATTAAGTTATGCCAACGTCAAGTGCTATAATTGCGGTAAGATTGGCCATATTCAGCGAAACTGCAAAGCACCCAGACAACGATCAAGATCTTCTTGCCGCAAAGGGACAAACGAAGAGCAAGTCAACAATCATTGCGCCATAGATCCCACATTTTTAGAATCGGAACCTTCTCAATGGCAGCAGAGGGATGATTACTGCGCTGGAAAAGCTGTCTGTCAACATTTGTACGTTtgttttattataacaaaaaagaaatgccGTTGTGGTATGCACGAAAAAGAACTACCTTGCTCCAAGGAATTCACATGTGAAacgaaatgtaaacaaattcgAGATTGTGGCAAGCATCCTTGCAACCGAAAGTGTTGCGATAAAAATTGCCCACCATGTGATAAAGTGTGCGGCAAACCATTGTCTTGTGGTAAACATAAATGTCAATCGATTTGTCATAAGGGACCTTGTTATCCGTGTCAACAAAAATCCCAAATCAATTGTCGCTGTGGTAAAACTAAAAAGGCCGTACCCTGCGGAAGAGAGCGTTCAGCACGTGTAGTTTGTTTGGAACCATGTCGTATTCCCTCAAAATGTCATCATGACAATAACCACCGATGTCATAAAAATGAATGTCCACCTTGTGCTCGACCCTGCGGTTTACCAAACGACACCACTAATTGTGCTCATAAATGTACAGCGAAATGTCATGCATCAATTAAGGTGGCTAAAAAATCAAATCCTAACACTACAAGTATATGGGAGCCTACTAAGCAGTTTGAATTCAAACAACTGCCTCATCCACGTTGTGAACAAAAAGTAAGCGTTACATGTATAGGCGGTCATGAAAATGCCGATTGGCCCTGTTGGAATTCTAAACCTACATCCTGCCAACGTTTGTGCAATCGTTCCTTGCGTTGTGGCAATCACACTTGCACTGTTGTCTGCCACACTGTGTTGGATTTAAAAGACATGAAGgaaCAACCTGGTTGTGCTTCTTGTCAAGAGGGCTGTAAAATTTCTCGACCTGAAGGATGTATTCATAATTGTTCGAAACCCTGCCATTTACCACCCTGTTATCCTTGCAGCGCTGctataaaaactaaatgtcaTTGTGGATTAATGCCTATCGTTTACAAATGCAGCGATTTTTACAATACTGAAGCCAAAGAAGGCGAACTTTTGGAAAAACAAGAAACCCTAAAGAGCTGCGGAAAtagatgtttaaaaaatTACCCATGTGGTCATCGCTGCGTAGCCCAATGTCATTCTGGTACATGCCCCTATCCGGAATCTTGTCGCAAAAAATTACGAATCTATTGTGATTGTAAACGCTTAAAATCCGAAGTTTCCTGTGACAAACATCGCGCCGGATTTCAACAATTAGAATGCGAtgataattgtataaaaacaaaaaaaacgttGGAACAAGCACGACAAAAGGAAGAGGAACTACGACGAAAACATGAAGAGGAACGCAATCGCTTGGAAGTTGaacaatttgaaaagaaatttagCAAGCGCAAACCTAAAGAACGTAAAACTTTGGAAGTGAAACAAAAGACTCCCACTAACTGGAAATTGATTGGACTATACGCTGGAATTGCAGCAGCTGTGTTGTTGGCGGTTGCTTTAGCATTTTTCGAGGATCATTAA
- Protein Sequence
- MKFDELKVEQLKKDLGKLDLPTGGNKAELQERLIDEFKRLDIDIAAYEFDEKEEIEVATRTAAEILESVHVSCRKNYDDIMVALQHKYGGEHRKEIIRMELRGRVQKANEMLHDFALEIDRLVQITNPGESHPLLHHFKTVTFVNGIRDADVKLAVRKFDITEDDERDIVKELKDMKESIMQALSYANVKCYNCGKIGHIQRNCKAPRQRSRSSCRKGTNEEQVNNHCAIDPTFLESEPSQWQQRDDYCAGKAVCQHLYVCFIITKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDKNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTKKAVPCGRERSARVVCLEPCRIPSKCHHDNNHRCHKNECPPCARPCGLPNDTTNCAHKCTAKCHASIKVAKKSNPNTTSIWEPTKQFEFKQLPHPRCEQKVSVTCIGGHENADWPCWNSKPTSCQRLCNRSLRCGNHTCTVVCHTVLDLKDMKEQPGCASCQEGCKISRPEGCIHNCSKPCHLPPCYPCSAAIKTKCHCGLMPIVYKCSDFYNTEAKEGELLEKQETLKSCGNRCLKNYPCGHRCVAQCHSGTCPYPESCRKKLRIYCDCKRLKSEVSCDKHRAGFQQLECDDNCIKTKKTLEQARQKEEELRRKHEEERNRLEVEQFEKKFSKRKPKERKTLEVKQKTPTNWKLIGLYAGIAAAVLLAVALAFFEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -