Basic Information

Insect: Pollenia labialis
Gene Symbol: BCL11A
Assembly: GCA_949318255.1
Location: OX439142.1:28321202-28341971[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.4 6.1e+02 2.7 0.1 2 11 34 43 33 46 0.87

2 7 0.03 4.1 9.5 2.4 1 23 204 227 204 227 0.95

3 7 1.7e-06 0.00023 22.9 1.7 1 23 586 608 586 608 0.99

4 7 0.014 1.9 10.6 4.7 1 23 614 636 614 636 0.99

5 7 2.4e-07 3.3e-05 25.6 2.9 2 23 871 892 870 892 0.97

6 7 1.7e-05 0.0023 19.7 3.3 1 23 898 920 898 920 0.99

7 7 3.1e-05 0.0043 18.9 0.4 1 22 928 949 928 949 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.4	6.1e+02	2.7	0.1	2	11	34	43	33	46	0.87
2	7	0.03	4.1	9.5	2.4	1	23	204	227	204	227	0.95
3	7	1.7e-06	0.00023	22.9	1.7	1	23	586	608	586	608	0.99
4	7	0.014	1.9	10.6	4.7	1	23	614	636	614	636	0.99
5	7	2.4e-07	3.3e-05	25.6	2.9	2	23	871	892	870	892	0.97
6	7	1.7e-05	0.0023	19.7	3.3	1	23	898	920	898	920	0.99
7	7	3.1e-05	0.0043	18.9	0.4	1	22	928	949	928	949	0.97

Sequence Information

Coding Sequence: atgtatacaaaaatgCTGTCAATAAGCGAGGATCAAGGATTTCGTTCTTTAAGCCaTTCTGACTCAACAGAAGCAGATGCCACTGCTCAGGATATGCTTACATGCGGTACTTGTCAAAAAGTGTTCGCTCTCTCCGACATAGTCAAATTTATACAACATAAAGTTTTGCAGTGTAATAAAGAGAACTACGGCCAGTGCTCTAATCAAGGTCCATCAAATGACAGAGCCGATACTGAGGATGGAAGACCATTGAGCCTCGCAAATCGGCGCCCATCGTTATCGGCAACCACTCGTAAAGCATCTGGAGGATCACGTATCCATACACCACCACCAAGTCCAGCTGACATGTTGGCTGATGGTGCCTCAAGTACACCAAAGCGTTTAGTAGATGAAAATGACAACACCACGCCCAAAAATACAGAATCTATATGTGATGGTAACAAGTCCTGCAATACGGCTGCTATCAAGCAAGAACTGATTCAGGATGATAATGATGTTGAAAACACTGAATTTTGCAATGACAATGATGATTGCCAACCTTTGACAAAACGTCCTAAGATAGAATTTGTCGATGCTGAATCTAATACTTTGCAAACAGAACCTAATAATTATACATGTTCAACATGCAAAACTCGATATACTTCAGCTTGGCGTTTAATTCAACATGTGCAACACTCACACGGAGTAAAAATCTACGTTGAATCATCGTCATCAACAGAGCCAACAAATTTGGTGTCCGAACCGATTATACCAGCGCAACAGAGACAAACCAACACGAATAACACAAGCAATAGCAGTCCTAATAGAGCGACGTGTTTGACATCGCCTATTATTGTTAGCagtcagcaacaacaacatcatcagcaacaacaaatacAGCAACAGTTTCAACATAGAGCGGCAGCCGTTGCTGCAGCAGCAGCTGCAGCCGAACAGCAAAAACAACAGCACCAAAACAATTTAACTACAGCGAtgcaaaatgcacaaaatttagCTGCTGCTGCCGCTGCAGGAATGCGCCACCATCCGTTGTTACCTCCACCAGACATGCATTCTGCCAATCCATTTAATTTATTACGAATGCCTTTGCCACCAAATCTGGCTCAGGGATCAGTAGTTCCTACAGTTTCACCTCTTTTCCCGCGTCCTCATTCTGAACATTATCGTATGGAGCAGCTTGTATCTGAACAATTTCGACATCACGGCCTCAATTTAGCAGCCGCAGCAGTTGCAGCAGCCAACTCGCTCGCCGCTCCCCATGCGCCATCAACACAATTTAACCAAAGTTCTAACGTGTCTTCTGGGGCCGCTGTGGAACCAAGGCCACCATCGAGTAGCAGCTGCCACCGTAGTTCTACAACACCATCTTCACTGCCATTGATGGCCGTTCAACAACCGAATTCAAATGCTGGAGGACAACAATCTAATTCACTCACATTGGAACCTCAGATGGATTTTTACTCGCAGCGATTGCGACAGCTTGCAGGAACAACAAGTCCTGGAGCTGGAAACATTGTTAACTCGAGCTCGCCGAGTCCACGACAAAAGCAATCGCCGAATTTCGCGAGCCCTTCTCCGTCACACCAACTCCCACCTACCCCAGTCACAAATAACACTCGTCCGCATTCCTTAACACCACCTGAAAATAGCAATACAGCATGCGTGGAAAATGGAGCCATGTTAAATACAACACCACGCTCTGCCTCAACTCCACCCTCAAAGCCTAGTCTTGAAACAGCGGTCAGTGCATCTGTGTACACGTGCGCTTACTGCGATAAAAAGTTCCGATTTGAAAATAATCTTATAATTCACCAGCGGACTCATAGCGGCGAAAAACCATACAAATGCACTGCCTGTGATTTTGAGTGTTCACATATTCAAAAGCTTATGAAGCATATGCGAGTTCACCGCAGCCCCATGGAAGATGGCCTGAGTAACACAGGGTCTGTAGAGACCAATGACACTGAGCCAGAACATGATGCAGAAGAAAATCCTGACGATGAAATTAACGAAGATGATGACGACGAAATAGATGAACAAGACGAAATAGACTACGAAGCAGAAGACCTTAGCGTAAGTAATAATCGTTTAGATGATAAAAACGATAACTCTAAAAGCGCACATTCTGCTACACCTACATCCTTGGTTGGTGAGCTAATGGATAAATTCGGCTTATCAAATATTGCTCAATACTCCGAAGCATACAAGCAGGCTCTTCAAGAATCAGGCAACTTTAAACAACTTACCAAAGATCACGATAATAACAACTCTACTAACTCGCCTATGAATCAGATGTCTGAAAAACTGAATGGGTTTCCTGCAGCTCTACGCCTCAGAGAAGAATTTGCAAAGAATATGTTTCAGAAACCACCTCAACAAGACTCAAATAATCCTCCATCGCAGGTTCCACTGTTCAACCCATTTCCAAATCCGTTCGAGCTGTCCAAGCGTATGAAAATGGACGGAAATGAATGGTGGAATATGCAGGCTCTTCATCGAAACGATTCACTATTCGAGAATCTTAAACTTAAACCTTTGGGCCTAGGCACCGCCAATTCTTTGCTAAATCAAAATCCTTTAATGAAAAAGGAGAGTCGTCAACGCAATGACACATGTGAGTATTGtggtaaagtttttaaaaactgttccAATCTTACCGTCCACCGACGCAGCCATACTGGCGAGAAACCATACAAATGTGAACTGTGTTCCTACGCTTGTGCACAGAGCTCTAAACTTACGCGCCACATGAAAACCCATGGCCGATCTGGTAAAGACGTTTATCGCTGTCGTTTCTGTGATATGCCCTTCAGTGTACCCTCCACATTAGAGAAACACATGCGAAAATGTGTTGTTAATCAGGGTAAGGCAGCTGCAGCTGCGGCCAATGCAGCCAACGCCGTTGTTGCTGCACAGGCTGCAGCAGCTGTCCAACTCCAAGCCCAAATGCCACCACAGCAACTCTCATCCCCACCAACAAACGCCTCCTTTCCACCACAATTTTCCAACATGACCGGAAGCTCTATTTCCTTGCCCAGCAGTATTGGCGACAACGACTCCAATGCCTCCACAAGCGTATCTTCCCAACACGCTATATCACTCAAACACGAGGCATGA
Protein Sequence: MYTKMLSISEDQGFRSLSHSDSTEADATAQDMLTCGTCQKVFALSDIVKFIQHKVLQCNKENYGQCSNQGPSNDRADTEDGRPLSLANRRPSLSATTRKASGGSRIHTPPPSPADMLADGASSTPKRLVDENDNTTPKNTESICDGNKSCNTAAIKQELIQDDNDVENTEFCNDNDDCQPLTKRPKIEFVDAESNTLQTEPNNYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESSSSTEPTNLVSEPIIPAQQRQTNTNNTSNSSPNRATCLTSPIIVSSQQQQHHQQQQIQQQFQHRAAAVAAAAAAAEQQKQQHQNNLTTAMQNAQNLAAAAAAGMRHHPLLPPPDMHSANPFNLLRMPLPPNLAQGSVVPTVSPLFPRPHSEHYRMEQLVSEQFRHHGLNLAAAAVAAANSLAAPHAPSTQFNQSSNVSSGAAVEPRPPSSSSCHRSSTTPSSLPLMAVQQPNSNAGGQQSNSLTLEPQMDFYSQRLRQLAGTTSPGAGNIVNSSSPSPRQKQSPNFASPSPSHQLPPTPVTNNTRPHSLTPPENSNTACVENGAMLNTTPRSASTPPSKPSLETAVSASVYTCAYCDKKFRFENNLIIHQRTHSGEKPYKCTACDFECSHIQKLMKHMRVHRSPMEDGLSNTGSVETNDTEPEHDAEENPDDEINEDDDDEIDEQDEIDYEAEDLSVSNNRLDDKNDNSKSAHSATPTSLVGELMDKFGLSNIAQYSEAYKQALQESGNFKQLTKDHDNNNSTNSPMNQMSEKLNGFPAALRLREEFAKNMFQKPPQQDSNNPPSQVPLFNPFPNPFELSKRMKMDGNEWWNMQALHRNDSLFENLKLKPLGLGTANSLLNQNPLMKKESRQRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRSGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAANAANAVVAAQAAAAVQLQAQMPPQQLSSPPTNASFPPQFSNMTGSSISLPSSIGDNDSNASTSVSSQHAISLKHEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200248;
90% Identity: iTF_01237125; iTF_01236114;
80% Identity: -