Plab034868.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- hang_1
- Assembly
- GCA_949318255.1
- Location
- OX439142.1:90715344-90740353[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.18 25 7.1 0.9 3 23 417 438 416 438 0.92 2 18 0.39 54 6.0 3.5 3 22 541 560 539 560 0.90 3 18 0.0067 0.93 11.6 1.1 1 22 635 656 635 658 0.90 4 18 0.0017 0.24 13.4 0.2 3 23 777 798 776 798 0.96 5 18 5e-05 0.007 18.2 0.2 1 23 806 829 806 829 0.96 6 18 0.00019 0.026 16.4 0.1 2 23 918 939 918 939 0.97 7 18 0.0014 0.2 13.7 2.7 2 23 988 1010 987 1010 0.95 8 18 0.0059 0.81 11.7 0.2 2 23 1019 1041 1018 1041 0.95 9 18 0.0041 0.56 12.2 0.2 1 23 1054 1077 1054 1077 0.95 10 18 0.00026 0.035 16.0 1.2 1 23 1136 1158 1136 1158 0.98 11 18 0.0028 0.39 12.7 0.9 1 23 1166 1189 1166 1189 0.96 12 18 0.24 33 6.7 0.1 2 19 1197 1214 1196 1215 0.94 13 18 4.6e-05 0.0064 18.4 0.1 3 23 1281 1301 1280 1301 0.98 14 18 0.00075 0.1 14.5 0.4 1 23 1336 1358 1336 1358 0.97 15 18 0.00023 0.031 16.2 1.4 2 23 1442 1464 1441 1464 0.91 16 18 1.4 1.9e+02 4.3 0.1 3 19 1485 1501 1484 1503 0.93 17 18 0.15 21 7.3 0.9 3 23 1519 1539 1519 1539 0.97 18 18 0.00084 0.12 14.4 0.7 1 23 1792 1814 1792 1814 0.98
Sequence Information
- Coding Sequence
- ATGGCTGTTCACGTGGATGGGTCTGTTGTCCAATATCTAGTAATACAATTGAGCTACAACTTGCGTTGGGAAGCCCACATAGCAAAGatttctaacaATGATAATTTGTCATTACGAATCTGTCACGCCTGCATAAGTTACTTAAATTCTTGGCAATCTTTTAAGAATCGTTGTCTGGCAGCACAAGCTAAACAGCGTTCTTGGCTGGAAAATTCTAACAGATCAATACAATCTGCTGAATATCATCAATACACGGCAGATAATCATAATGATGAACAACAACACCACAGCCAtcatcatcaacaacaacaagatgAGCAGTCATTGGCTTCTTCCATATTGGAGGGGATTTCAACGTTAAAAAAACGCAAATCTTTAACAGTCTATGTGAGTCCTAAATCgcaacaaacaaaacaacaacaagaaaaattattacaaaaacagCAACTTAATATCGTAATGCCGTTAACAAAACGCCACTATACCAAACATAAATTTAACAAGTCACAGCGACAAACTCAAAGTCAAACGTCACATACAGTGTCACAAACTACGACAATAATGCATCATGTACAAGCATCGTCTagcaaaacaaagcaaaaatctGACAAGAAACAAATGTCTGCAAACCCTCAGTCATTATTAGCAACTTGTTCACCCCTGCAACAGTCATTTGTTATGCCAGCAGTTCCTAGCGCAACTGCTGCAGTAACTACTTGCACAATTACTGCAACAACTGTAACAGCAACCGCTACGGCAAAAGCAACTTGTTTGAATACTCCGACCAGTACAACCTTAACTGCTACGACAATGATGGCTAGTAGTAGCAGCAGTAGTGCTGAAACCGTAACAGCTGCTGCTGTTGCTTCCGGTTCGATTGTTAGTGCTGGTTCTAGTGATGAATGTTTGTTGGGTGGATCAAGTGCATCCCCTTCGGCCATTGCTTGTACAAGTGCTGTGCAACAATTGCGTTTATTTAGACGATACTCCTATAATccGTTACCTGCAGTACAAATAAAAGACGAACCACTTGAGGCGGATGACGATTATAGTGTAGCTAAACATCAACAGCATGAAGAATCAGATGAAATGGTCGTAGATCCAACCATGTTTTTAGAACGCACCGCCGATGAGGGTGAATTTATgGAATCCACCTCAAATTACGATTATGAAGTCATAAGAACACCTGCCGATTTAAAACCATTACCAGCTAGTACTACTATACGTGTGAGCACTAAAGAGGCTGCCTGCCGTgcttgcaatttaaaattttcaacacgaGCCAACGCTAGACGCCACGAAAAGAATTTGCACCCCAATCTTTTTGAGACTCTAGAGGAAAACGATCagtcaataaataaacaaaccgCCGCTTTAAATGCCTCCTTAGAACTACAGAGAGCTGTAGCAGCTGCTGTGGCCGCAGATGCTTGTAAATTATCCAGTGGTGCTGTGATATCATCACAAAAATATCGCCAAGAAGTTGTTAATGCTTTTAATAATAGTGAATTTGGTTTTGATTATGATAATCCGGAAAAATACCGTGAACTTTTGACggatgaaaaaattgttttcctacAACAAAACGATGAATTCCTAAGACAATATCAAAATATGACTTGTCGTTGTTGTAACAAATACTATACAACTTATAAGAATTTCATGGCTCACATGCGTAAAAAGTACCTTACACTACCaagaaattgttgttttaactGTTTAAAACTAAACGATTCCAAAGCCTTGTTTATATCACATTTGAAAAAGCGCAATTgcataaatttacataaagtACTGCATAATCTTATGGCAAGAAATTCTAACTTTGCAGCAGCAGTTACGGCGACAGTTGCAGCCGCACCGGAAAAAGTTCGTGCCAAAGAATTATTGGTTAATAAAATGTACGAGTGCAAACTTTGTCCAAAAACTTTCCGTTTAAAATTAGAATTTCGTTCGCATGTCTACGATGAACATGCCGATGTGCAACGCAAAGATGTGAGCAATATTCAGTGTTGTTATTGTGCTATCGATATTGAAGATCCTGCCGATCGTAAACGTCACTATAACAATATGGATTGTATTGTTACATTGCGTTGTGTTACTTGCGATACGAAACATGAAACCCAGCTAAAGTTTATGGAACACGTTCAGGAAAAGCATTTGGCCAATTTTGGTGAACAGTCAAAATTCTTATTCAGTGCGGATAATTCACCAAGCAAGATTATGCCAGgaGCATCCTCAGCTGACGATTCTCGCAGTGGCCATTTCAATGTATCACTTATTAATACCacaccaaaaacacaatacTTTTCACGAATGCCCCAAGCTTGTCCGATTTGCGGTCAGCAGTATAACAACTACAATAATGTTTTGCGACATATGGAATCTAAACATCCTGATCAACTACCACAAACCTATAAATGTGTAAAATGTGGACAAGGTTATCCCAGATTATCAAACTTACGAGAGCATATGGTTAGTTCTCATGGGGCAGATAAAGCACGACATACTGGATTTGAGTATATTGTTAATGCAGACGCAGTTAAAAATGCAACTGGTACAACAACCGCACCACAAAATCCCTATACAGGACGTTATGATTATGTGATGAAGGACTTAATGTCTATAACAAATGGTGGGACAGTTGTTAATGAAGATTGTGAAAGTGAAAATATGCCCAAGAAAATGCGTTTAGAGTCTAACATTTcgattaataataacaatagcTCTGTGACTAATGCCAGCCCAAGGGAATGTTCCATTTGTAATGCTGTTTTTGCCAATAATATTGGCCTTTCTAATCATATGCGCTCACATCAAAGTGCGCAAAATAACAACTACGGCGTTTCATCTTCAAAGACAGTAACAGCTGGTAATGCCAGCCAACCTTCCTTAACAGGTCAACAGCAAATATTGAGAAAATCTTTGGAACAAGCAGCAGATAGACGTTTCCGTCGAATGCGTTGCCGCATTTGTCAACGCCGATTTTCCTCAAAGAAATCATATCGTTACCACATGCTCAATGACCATCAAATACGTAATGTACAATTTATAAAGTGTAAACTGTGTGACGCCGAATTCGCCTATGAAAAGGGCTTAAAAGTGCACATGTTTAAGATACACAATACGCTGCTCAAGGATGAAATGATTATAAAACAATATGAATGCGATATTTGCTCTATAGTCTATCGGACAGATGTAGAGTTGCAACATCATTTAGCTAATGTTCATAACAAACACGGAGGACCCTCTAATATAGATGATGAAGACGACGGCTATAATGCCGATGAGTCTTTGGCTGCAGGACCACCGGATAATAGTTTTATGGCAGCTGATATGTCAGGCGTATCGACACCTGTTAGTAGCGTTGGTTTGGGAGACACACAAACTGGGCCATTGTATTGGTTTCAATGTAAATATTGTCCCTCCAATTTtaataccaacaaaaaattGGCTATACATATCAACTCGCACGACGAGTTTGATTCTAATGATTATTCTTGCAAAGATTGTGGCAATGTATACAGTGGACGTAAAAGCTTATGGGTTCACCGATACAAGAAACATCCACAAATCCCTGAACCCTCAGAATGTGTGATGTGCAAGAAGGTGTTCTTTGATgttcaaatgttaaaaaatcatGTACCCACATGTAATCGCAAACCAATTACACAAGCTGCCACAGAAACTTCTACCGCTGTGTACAAACATAAAACCGGTGATGATGAAGATGACGACGATGATGAACACTCCCGTGATGCTGATAAAACTCTATCCACCGCTATTAATGCAACTGTTGGCAGTGCaagtaatttgaaaataaaattacctgAGGTAGCTTGTACGATTTGTGGCGCTCGTTTTACCGATCAGGATCTGTTCGCCAAACACATACAAATGCATGAAATGGAGTTGTATACAGACAATCCTTTGGCGGCCATGTTCGATACTGGTCCCGCTGATCCAAATCAATTCTATATGGATCGTATTAATGATAATGGCGAGTATGCATGCGATTTGTGTGCAAAAACATTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGaaCGAAGCCGATCAACATATGTCGAGCAACTTCCATATACAACTCAcgcagcaacagcaacagctCAACAAAacgcaacaacaacagcatctGCAACAGCAACTGCAGAAATCCAAGATGCCGATCAACCATCAACATCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGTCAATTTGCCAATATGGGCGGCAATCACAGGCCCCAGAAACGTAAACGAGAACTCAAATGTCCCCATTGTCCCTCAACCTTTATCAGTAATAACAATTTGCGACGACACTTGTTTGAATTGCACAAAAATGAAATGGGCTATTTACCTGAACCACCGAGAATTGAATGTGATTTACCAAATATGTGCAGAAAGTGTAATGTTAAGTTCGAAACAAAAGCCGAATGGATTGAGCATAAAGTGGCGGAAGCCAGGGTTATGAAACCATTTGGTCCATTCCAATGGGGCTGTGATTTGTGCGGTGCGTACGTATCGCGGAAGGAAAAATTGATCAATCATTTACATAATCATATGAAAGAACAAGTTATATTACCGGTCGAACGTCCAGAAGGCAATAAACAGTCACAGGAACGGCCTCTTAAAACAGAAACGCAAGAACAGTTGCAACAGCAAGCAGCAGCTCAGGCCCAAGGTCAACAACAACAGCGAACTGAAGGCAATGATCTTATGCCTGAATTTAAGAAGATCAAAATCCCTTCTTTGCCACAGAAAACAGACGGTGATGAAGAGTCAAGAGATAGTGGTAAAGACCAATATGATGAAGATGATGAGGAGGACGATGACGATGAGGGTGATGTTGAAGCTGAAGTTGACAATAACGATAACGAAGTTGAGTTAAAAAATGAACAGCAACAGCAACGACGACCTGTTGTCGAACAATACGATGAAGATGAGGAGGAGGAAGCAGTGGAAGGAGAAGAGTTTGATGATTTGGCGGTGGGAGCCCAGCAGACGGTGGGCGGTGATGAAGATGTGGACGATGACGATGATGACGATGAGGAGGAAGATGAAGATGCCGATGATGACAGTAGTGATGCAGATGATGAAGATCCTTCTACTAACGAAGACACTAATGAGGGCTCTAGTCTAAAAGGCAAACCCGCTACCGAATTACCACAACCCCGCAGTTACAATGACACTGAAAACGACGATGTGGAGGAAGATGATTCTGATGaatttgatgatgatgatgataattcCTCAACGGAAAATCGCAAACTACCCTCCACGTCTTCAGTAGTCAGTAATGTTGTAGTAAAATCTCGTTATTCTTGTGATTTATGTCAGGTGTATTTCGATTCACAACAAGAACtacaaaaacatgttaaaatgcATTTCCTTAATGGCCCCGGCTCGGTAACGTTAACGGAAATTAAATCCTCCAAATCATCATCCAACAAAAGTCGTAGTAGTAGTAGCGATGTTGTTGCCGTATAG
- Protein Sequence
- MAVHVDGSVVQYLVIQLSYNLRWEAHIAKISNNDNLSLRICHACISYLNSWQSFKNRCLAAQAKQRSWLENSNRSIQSAEYHQYTADNHNDEQQHHSHHHQQQQDEQSLASSILEGISTLKKRKSLTVYVSPKSQQTKQQQEKLLQKQQLNIVMPLTKRHYTKHKFNKSQRQTQSQTSHTVSQTTTIMHHVQASSSKTKQKSDKKQMSANPQSLLATCSPLQQSFVMPAVPSATAAVTTCTITATTVTATATAKATCLNTPTSTTLTATTMMASSSSSSAETVTAAAVASGSIVSAGSSDECLLGGSSASPSAIACTSAVQQLRLFRRYSYNPLPAVQIKDEPLEADDDYSVAKHQQHEESDEMVVDPTMFLERTADEGEFMESTSNYDYEVIRTPADLKPLPASTTIRVSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSINKQTAALNASLELQRAVAAAVAADACKLSSGAVISSQKYRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIVFLQQNDEFLRQYQNMTCRCCNKYYTTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHNLMARNSNFAAAVTATVAAAPEKVRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDEHADVQRKDVSNIQCCYCAIDIEDPADRKRHYNNMDCIVTLRCVTCDTKHETQLKFMEHVQEKHLANFGEQSKFLFSADNSPSKIMPGASSADDSRSGHFNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSSHGADKARHTGFEYIVNADAVKNATGTTTAPQNPYTGRYDYVMKDLMSITNGGTVVNEDCESENMPKKMRLESNISINNNNSSVTNASPRECSICNAVFANNIGLSNHMRSHQSAQNNNYGVSSSKTVTAGNASQPSLTGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIIKQYECDICSIVYRTDVELQHHLANVHNKHGGPSNIDDEDDGYNADESLAAGPPDNSFMAADMSGVSTPVSSVGLGDTQTGPLYWFQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDVQMLKNHVPTCNRKPITQAATETSTAVYKHKTGDDEDDDDDEHSRDADKTLSTAINATVGSASNLKIKLPEVACTICGARFTDQDLFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRINDNGEYACDLCAKTFTQMTALKVHRKWHFRGDSKQNEADQHMSSNFHIQLTQQQQQLNKTQQQQHLQQQLQKSKMPINHQHLLGLQAVGLMPRQFANMGGNHRPQKRKRELKCPHCPSTFISNNNLRRHLFELHKNEMGYLPEPPRIECDLPNMCRKCNVKFETKAEWIEHKVAEARVMKPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKEQVILPVERPEGNKQSQERPLKTETQEQLQQQAAAQAQGQQQQRTEGNDLMPEFKKIKIPSLPQKTDGDEESRDSGKDQYDEDDEEDDDDEGDVEAEVDNNDNEVELKNEQQQQRRPVVEQYDEDEEEEAVEGEEFDDLAVGAQQTVGGDEDVDDDDDDDEEEDEDADDDSSDADDEDPSTNEDTNEGSSLKGKPATELPQPRSYNDTENDDVEEDDSDEFDDDDDNSSTENRKLPSTSSVVSNVVVKSRYSCDLCQVYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSNKSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760325;
- 90% Identity
- -
- 80% Identity
- -