Basic Information

Insect: Pollenia labialis
Gene Symbol: -
Assembly: GCA_949318255.1
Location: OX439142.1:160365563-160373713[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.11 16 7.7 1.3 1 23 251 274 251 274 0.91

2 25 1.9e-05 0.0026 19.6 2.0 1 23 280 303 280 303 0.97

3 25 0.0005 0.069 15.1 1.2 2 23 333 354 332 354 0.96

4 25 0.072 9.9 8.3 0.3 1 21 431 451 431 452 0.96

5 25 0.075 10 8.3 0.7 2 20 464 482 463 485 0.94

6 25 0.0053 0.73 11.9 2.2 1 23 564 587 564 587 0.95

7 25 0.003 0.42 12.6 0.2 1 20 594 613 594 615 0.95

8 25 0.082 11 8.1 0.2 2 23 627 649 626 649 0.94

9 25 0.00035 0.049 15.6 0.4 2 23 664 685 663 685 0.97

10 25 2.5e-07 3.5e-05 25.5 1.9 1 23 691 713 691 713 0.98

11 25 9.9 1.4e+03 1.6 2.1 2 23 745 766 744 766 0.80

12 25 0.03 4.2 9.5 2.8 1 23 856 880 856 880 0.96

13 25 1.8 2.5e+02 3.9 1.2 2 21 888 907 887 908 0.89

14 25 1.2 1.7e+02 4.5 0.7 3 23 919 940 918 940 0.95

15 25 0.0089 1.2 11.2 4.2 1 23 950 972 950 973 0.95

16 25 0.0042 0.58 12.2 4.6 1 23 980 1002 980 1002 0.97

17 25 0.00066 0.092 14.7 0.1 2 19 1029 1046 1028 1049 0.94

18 25 0.0036 0.5 12.4 4.5 1 23 1102 1125 1102 1125 0.97

19 25 0.047 6.5 8.9 0.7 1 23 1162 1185 1162 1185 0.97

20 25 0.065 9 8.4 6.2 1 23 1217 1240 1217 1240 0.97

21 25 4.6e-07 6.4e-05 24.6 0.7 1 23 1267 1289 1267 1289 0.96

22 25 2.9e-06 0.0004 22.1 0.4 1 23 1295 1317 1295 1317 0.99

23 25 3.5e-06 0.00048 21.9 2.9 1 23 1323 1345 1323 1345 0.98

24 25 5.6e-06 0.00077 21.2 2.1 1 23 1351 1373 1351 1373 0.99

25 25 0.044 6.1 9.0 0.7 1 22 1379 1400 1379 1403 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.11	16	7.7	1.3	1	23	251	274	251	274	0.91
2	25	1.9e-05	0.0026	19.6	2.0	1	23	280	303	280	303	0.97
3	25	0.0005	0.069	15.1	1.2	2	23	333	354	332	354	0.96
4	25	0.072	9.9	8.3	0.3	1	21	431	451	431	452	0.96
5	25	0.075	10	8.3	0.7	2	20	464	482	463	485	0.94
6	25	0.0053	0.73	11.9	2.2	1	23	564	587	564	587	0.95
7	25	0.003	0.42	12.6	0.2	1	20	594	613	594	615	0.95
8	25	0.082	11	8.1	0.2	2	23	627	649	626	649	0.94
9	25	0.00035	0.049	15.6	0.4	2	23	664	685	663	685	0.97
10	25	2.5e-07	3.5e-05	25.5	1.9	1	23	691	713	691	713	0.98
11	25	9.9	1.4e+03	1.6	2.1	2	23	745	766	744	766	0.80
12	25	0.03	4.2	9.5	2.8	1	23	856	880	856	880	0.96
13	25	1.8	2.5e+02	3.9	1.2	2	21	888	907	887	908	0.89
14	25	1.2	1.7e+02	4.5	0.7	3	23	919	940	918	940	0.95
15	25	0.0089	1.2	11.2	4.2	1	23	950	972	950	973	0.95
16	25	0.0042	0.58	12.2	4.6	1	23	980	1002	980	1002	0.97
17	25	0.00066	0.092	14.7	0.1	2	19	1029	1046	1028	1049	0.94
18	25	0.0036	0.5	12.4	4.5	1	23	1102	1125	1102	1125	0.97
19	25	0.047	6.5	8.9	0.7	1	23	1162	1185	1162	1185	0.97
20	25	0.065	9	8.4	6.2	1	23	1217	1240	1217	1240	0.97
21	25	4.6e-07	6.4e-05	24.6	0.7	1	23	1267	1289	1267	1289	0.96
22	25	2.9e-06	0.0004	22.1	0.4	1	23	1295	1317	1295	1317	0.99
23	25	3.5e-06	0.00048	21.9	2.9	1	23	1323	1345	1323	1345	0.98
24	25	5.6e-06	0.00077	21.2	2.1	1	23	1351	1373	1351	1373	0.99
25	25	0.044	6.1	9.0	0.7	1	22	1379	1400	1379	1403	0.90

Sequence Information

Coding Sequence: atgtcCAGCGATATTAAAATTGAATGTTTAATAAATGGAGTCCGTTATAAATGCCGTACTTGTTTTGATCCAGGAAGAACATTCTACTCCCTTAGAGATGAGTATAGCAAGTCCAAAACTTTGTGTGATTTATTGAAGGATATTACTCAAACACAGACAAGCGACGACGATTTACTCCCAAAAACCATGTGTTGTAAATGCTTAGGAAAACTAAAAAGTTCCTATGATTTTATACTTCAGATTcatgatgttaataaaaaatacgcACAATTGTTAGACAATTGTAATGATCCATTGCAGGAAGTTGATAATTTTACCGATTGTTTGGCAGAATCAACAATTGACTTACCATTGAATCAGTATATTCCAGAAATTAAGATAGAGGAAGATTTTCCTGATCCTTATAACATTGTTTTAGATAACAAACAATGCGCAGGGGACAGTGAAGCAAAATTAGAAAACGAAGgtGTACTGGAAGCTGAGGATTCTTTAGGTAACATTAATACAGATGACTTTAAAACAAGTGATCAATTAGGAGAACGTAAAAagtattatttgaaaaacagGAATCGAAACATAGATGAAGATTGTAACGATAATAGcTCGTCTTCATCTGATGAAAGTGATTATGTGCCActcaaaaagttaaagaaagaaaaatgcaACAATACCAGCAGtcCGCTAGTTAAACGCAAAAAAGGTCGCCAAGCTCCAcaatattatgataaaattgaaaaagttaacGATCGTTTTGTGTGCCTCATAtgccaaaaaacattttcattacgCAAGGATTGTGGTCGACATATAGCGTCTATTCATTTGCGCCAAACCATGTTTCCTTGCGAAATTTGCGGACAACGTTTTAGTCGTAAAGACAAAATACAACATCATATTAAACGTATGCATTCCGGCGGAATAGCGTATCCGCCTAAACATAAGGAATGGTTGTTTGGAGATCGTTTATATTATAAGCCTTCTACTTGGCTTCTTGTGCAATGTAAATTGTGTGATGCAACATTTAAAACGACTAAAGAACTTCGTCAACATCTTACTAATCACAGTAAGTTTGACACTCTTCATAATTTAGAAATAAACAGTAACGTTATCCAACATTTGTTCGGAAATATGATCGATTTGAACATCGTGAAGGATAGCATATGCAAAGATATCCGCGAAGAAAATTGGTTTAAATACTACACAGTTTTGAATAAATATGGCTATGAAATGTCTATTAGTGATACGGAAGTTGAAGAGATGAATGAAGAAACTCGAGAGAGTCCCAAGAAATACAAGTGCGATATATGTGCAAATGAGTTTTCTTTTCAATATCAAGTTTTCGCTCATTTAAAGGAGGACGGAAGAACGGTATCTGCCAAGACTATAATCCGATGTGGCCTTTGCGCACACTCCTTCGACAAACTAAGAAATTTACGCCAACATATGCCTTTACATGCGGACGGAAAGACTGGCATTGACTTTAAAGGCTGTATTTATGTAAAACGTTTCGAACGTGCAAAATCAATTGATTTTGCTTTACTACAGCAGGAAATACAAAACGCTTATAGTAAATCTCAAATAAGTCGTTTTTATCGAGCTATTAATAGAGATGGTAATGAACTGGACATTTTGGATTCGGATAGTGATACGGAGGAAGCCAAGGATAGTGATCAAGCTTTAGAAAATGAATATAAATGTGAACTCTGTAGTTCAGCATTCAGAAgaagaaaacttttattaaatcatCAACACGAGTGGCACAATGGTGTGCCTTTGCCTTTCACGTGTAACGACTGTACCCAGCAATATGTAAGTAATGATTTATTGCAGCAACATTTAGTAAGGGATTGTTGGAATGAACATCGGCGAATAGCTCAACAATGTGACTATTGTAATGCTCGTTTTATATGGCCAAATAATCtattaaaacataaagaaattcagCATAAAAATCAGAAAACACCAAAGCCTCAAAGAGCTAGTACATTAAAGTGTGAGTATTGTGAAAAAGTATTCATATGGCCCAAGGATTTGGTGCGCCATAGAAAAACGCATACAGAAGGGAAAAAATTTACCTGTCCGCATTGTGATCGTAAATTTCAACGCAAAGACAATTTGTTAGCGCACATCAGAATACATTGTCCTGATGGCATTCCCACTGTTTCCAATCCCGGTAAAAGCATCGACTACATACTGCCACATTTAATAAAGCCACATGGCTGCAAACGCATTAAATGCATGATATGTTATTCTGAACACAATCGCATACGCGATTTGAGATCTCATTTACGAACTCATCGGTATGCAGTAAACTttgaaaaaagaagagaaatCGAAAGTTTGGAAGTCATATCTTCTCAACTATATCCAGATGAACCAGATGCTTTAACAGAAGATGTATTAATAAAACGTATCAGTTCCGATATTGTTGCGGAAAATAATTTAGAACGTTTTTACTCTATAACAAATGAAAATGGGTATGAAGTTTCTTTAGACAGTTCTGAAACGGAAAGCGATTCTGATGACAATGACAACGATAAAGAAGTCAATAAATCAAAACGTATATATAAATGCgatttatgtcaaaatttaagttttaatcgtaaatacaaactttttgcCCACCAAAACAATAAACATACTTGGGAAGAAGCTCGTCATATTTGTATACACTGTAACGGGCGATTTATTTCATCATATATGCTGCAACTACATTATAAGAATCAatgtaaaaatactaaaaaacgCAACTTTTGCCGCCGTTGTCCCTTGCGATTTATGTGGAAGAGTAATATGAAGGCTCATATCACAATGGAACATGGTCACGAGatcGATTTAACTCGAGGCCATGAATGTTTTCTATGtcaagaaaagttttttcctcAAAAAGAACTTCAACGCCACTTGATCACACATCATTCGGCGGATGCTGAACTTCATTACTGTCTCCTCTGTCCAAAAACATTCTTTAGCGTAGAACATCTTAATAAACATTTGAGTCGACATCGTTTGACTACAGATGATGTCGAAAGCGTTGAAAGTTTAATACATTCCACATGCTGGCCTAACggtgaaaaagttattaaatgcaaaatatgtgGCCAAACATTTGATACAATGGGCAACTTAAGAGAACACTTTTCCCTCAAAAACCCTCAAAACATGTGTTCTAATCATCATTCGTTTGCAAATTACTCGGCGATCAATCAAAAGGGGTTCGAATTGCATTTGGAACTGGACTCTGAAACCGAAGTGGAAGCCGAGGTGCAATataaaaggggtcaaaaaaatattaaatatcccTATAATTGTTGTATGTGTAGTATGTCTTTCAAAAGAAAGTATCAAATAGCTCAACATCAGCGTTCTATGCATAACTATGAAATGTTGGCTCTAAAATGTGATCACTGCATTTTTAGAACAGTCTCAcagaAAGTTTTAGATTACCACAAGGCAACGCAGTGTTTAAATACCGAAAAACAATTCGAATGTGAACAatgtaaattcaaatttatgtggCAAGAGAATCTAGAAAATCATGTTATTACGTTTCATACTCTAAAAGATTCCAAAGCAACAAATGCTGCAGCAACCATATCGACTTCTAATGAACCTGTGCCAACCAATAGCAAAAATGATactaatatttttgagtgtatggACTGTCACCGCCGTTATAACCGCAAAGACCGTTATAAAGCTCACTTTAAAAAGTTCCACGGCGAGGAATTACAGATAACCCCAGAAAAGAAAAGTTCAAAAGTTCGCAAACAGCCCATtccaaaaacagaaaaattgtatttatgtgcCTTTTGTGGCCTTTCTTTTTCAAACAATTCAAATCTAACTGTGCACATGAGAAGACACACAGGAGAGAAGCCATTTAAGTGTGATCTTTGCGAAATGGGCTTTCCACGTTCATCCGACTTACAAGCCCACCGTCGCACACATACTGGAGAACGTCCCTTCAAATGTATGTACTGCGATAAATCATTTTCGCGACAATACAAATTGAATGTTCACAACCGCATACATACCGGCGAGCGTCCTTACCAGTGCTCGTTTTGTCAGAAATCATTTATTCAATCTAACGATTTGACACTACACTTGCGTCGTCATACGGGTGAAAGACCCTATATGTGCGAAGTTTGTGGTGAAGGTTTTATATGCGCCACATCTCTCAAACAACATCGTAATTCTAAAGGACACCAAgaagaaaaaattgatttaaaaacgtGTGTTCAACAGTTAACACAATTTGACTTGAAATTCTAA
Protein Sequence: MSSDIKIECLINGVRYKCRTCFDPGRTFYSLRDEYSKSKTLCDLLKDITQTQTSDDDLLPKTMCCKCLGKLKSSYDFILQIHDVNKKYAQLLDNCNDPLQEVDNFTDCLAESTIDLPLNQYIPEIKIEEDFPDPYNIVLDNKQCAGDSEAKLENEGVLEAEDSLGNINTDDFKTSDQLGERKKYYLKNRNRNIDEDCNDNSSSSSDESDYVPLKKLKKEKCNNTSSPLVKRKKGRQAPQYYDKIEKVNDRFVCLICQKTFSLRKDCGRHIASIHLRQTMFPCEICGQRFSRKDKIQHHIKRMHSGGIAYPPKHKEWLFGDRLYYKPSTWLLVQCKLCDATFKTTKELRQHLTNHSKFDTLHNLEINSNVIQHLFGNMIDLNIVKDSICKDIREENWFKYYTVLNKYGYEMSISDTEVEEMNEETRESPKKYKCDICANEFSFQYQVFAHLKEDGRTVSAKTIIRCGLCAHSFDKLRNLRQHMPLHADGKTGIDFKGCIYVKRFERAKSIDFALLQQEIQNAYSKSQISRFYRAINRDGNELDILDSDSDTEEAKDSDQALENEYKCELCSSAFRRRKLLLNHQHEWHNGVPLPFTCNDCTQQYVSNDLLQQHLVRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKEIQHKNQKTPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLAHIRIHCPDGIPTVSNPGKSIDYILPHLIKPHGCKRIKCMICYSEHNRIRDLRSHLRTHRYAVNFEKRREIESLEVISSQLYPDEPDALTEDVLIKRISSDIVAENNLERFYSITNENGYEVSLDSSETESDSDDNDNDKEVNKSKRIYKCDLCQNLSFNRKYKLFAHQNNKHTWEEARHICIHCNGRFISSYMLQLHYKNQCKNTKKRNFCRRCPLRFMWKSNMKAHITMEHGHEIDLTRGHECFLCQEKFFPQKELQRHLITHHSADAELHYCLLCPKTFFSVEHLNKHLSRHRLTTDDVESVESLIHSTCWPNGEKVIKCKICGQTFDTMGNLREHFSLKNPQNMCSNHHSFANYSAINQKGFELHLELDSETEVEAEVQYKRGQKNIKYPYNCCMCSMSFKRKYQIAQHQRSMHNYEMLALKCDHCIFRTVSQKVLDYHKATQCLNTEKQFECEQCKFKFMWQENLENHVITFHTLKDSKATNAAATISTSNEPVPTNSKNDTNIFECMDCHRRYNRKDRYKAHFKKFHGEELQITPEKKSSKVRKQPIPKTEKLYLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCEMGFPRSSDLQAHRRTHTGERPFKCMYCDKSFSRQYKLNVHNRIHTGERPYQCSFCQKSFIQSNDLTLHLRRHTGERPYMCEVCGEGFICATSLKQHRNSKGHQEEKIDLKTCVQQLTQFDLKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236971;
90% Identity: iTF_01236971;
80% Identity: -