Basic Information

Insect: Pollenia labialis
Gene Symbol: lola
Assembly: GCA_949318255.1
Location: OX439143.1:139119054-139121339[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.4e-11 3.3e-08 34.6 0.0 4 45 421 462 418 462 0.91

2 2 6.1 1.5e+04 -2.7 0.9 4 20 559 574 559 574 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.4e-11	3.3e-08	34.6	0.0	4	45	421	462	418	462	0.91
2	2	6.1	1.5e+04	-2.7	0.9	4	20	559	574	559	574	0.86

Sequence Information

Coding Sequence: ATGGGCGGTCCACCAGCCCCTACCACCTCAAATGGCCCGCCAGAGGGTCAAACCTATTGCCTGCGCTGGAATAATCACAAATCAAATTTGGTAGAGATACTTGATGCCCTTATCAAAGTCGAAAGTTATGTAGATTGTACCATAGTGGTAGACGATCAAATTCAATTCAAAGCTCATCGTGTAGTTTTAGCTGCCAATTCGCCATATTTTCAATCCATTTTACAGGATATGCCCATGGACCATTGTAGCATTATATTTCCGGGTGTAAAGGCCTTTGAAATGCGTGCTTTATTGGAATATATGTATACAGGAGAAGTGAATGTAACCCAAAGTCAAATACCCAAAATAATGCGCATAGCTGAGGAATTGGAGGTTAAAGGTCTATTTGATATGGctgatttgaaagaaaagttcaaCAAACTTAGTGAAGAGTATGCTGAAAGATCGGCCAGCAATCCATATGCTAGTACCTCAGCACCACCAAACCCCTATTTCTCCGTAACTACCACCTCCTCATCcccaacaaatacaacaaatcCCAAAACTAGTTCTAAGGATATCGATAACTTTCGTAATAATTCCTCCTCCGTGATCTCTACCTCATCAAACATTTCACCTTCAGCTGCTCCCTCTAGCAGTTCTTCACCTCCCTATAGTACTTACAAATCACCCTACTCCAGTCTATATACAAAGTCTCCAGGACCCAATGCAAATCAATCTTCTTCATCGGCCCCCCAACCGCAATCCAGTCAACAAACTCCTAGCAATATAACGCCCACCAATGAACGTTCTTCTCAGTGGCCTATGTCACCATCAGCTGCGGCCGCTGCTGCCATGCTGAGTTCCGTTTATGAGTCTGCTCCCGATATGAATCCCTTGAAACGAAAAAAGCTGTCCTCTATGTCTAGTATGTTAATGAATCGTGACACTCCCATTTTGCGTAACGTTCTAGCTCAAGCAAATCCTGCCGATTCCTCACAACAACTGCCTCTACTTTTACCCAATGCGGTAGCTAATATGAAACCTGATAAATCCTTTAACTCGGAAAAGAATTTAAGTGGTCATAATAATAATCACAGTTTCAGTGGTTCTGATTATGGTGATAAGAAATACCATGACGAAATACCACATTCCCCCTTTACCGATCGTTCCTTCGAAGATGATGGGTTTGATCAAAAGAACGGCAGTTTTGGCAGCAATTTCCCCAACAATAGCAATCAAAAACCTGAATGGAAACGTTACAAACAATACACCCGTAGTGATATCATGTCTGCCATCCAATGTGTTCGGGAAGGCATGAGTGCTTTGCAAGCTTCACGCAAATTTGGTGTTCCATCCCGTACACTTTACGACAAGGTCAAGAAGCTAGGTATAACCACAGGCCGTCCCATGAATCGGAGCATTAAACGTAGTCCCAGCAGTGTGGAATCCTCTCCTGCCTTCCCTTATCCCCATGGCTATGGTCAAGCTTCGGTTGCCGCTGCTGCTTTGCATGATGCGGCTGCTCGTGAGGAACACGAGTTGAAGGAACATCACCGCAATAACGAACACCATCATTTACCACCCACAATTCCCCATCCAGCTGCTGCCTTATTAGATCACGCTTTCCTGCAACAGGCTTTGGAAAATCGTGGAGGCGGCGATATTGCTGGCCGTGAAGCGCTTCATGCCATGGCTTTAGCCGCAGCTGCTCATGCTGCCGCCAATCGTATGTCCACTAGTCCTGGACCCAACGGCAATGCAGTACGTTCACCCAGTCCTACCAATTACGCCCTTAAATACAACAATTTGCGCACTGCCAAACATGAACTTATAGAACATGAATTGGAACGTGAACGTGAAAGAGAACGAGAATTTGTTGAGCGAGAAAGAGAGCGTGAGCATGAACGTGATATGGGGCCTGGACGTGATGACGATGAAAATGATCATGTTGAGGATCTATCGGTGGCGCGCAAAGAAAATAATCATTCGCCCTTGGAGACTAGAGAAAGACCTGAATCCCCCTACACACCGGAAGAGCCAGCCAGTGGTGTAAATGAGAAATCCGTTATAATGACGACTCAAATACCACCAAATCCCAGTGCTGACGCATTCATCAATGACACCAATATGAAACGTGAGGTGATAATAGATGATATTAGAGCTGACTGA
Protein Sequence: MGGPPAPTTSNGPPEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQIQFKAHRVVLAANSPYFQSILQDMPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEYAERSASNPYASTSAPPNPYFSVTTTSSSPTNTTNPKTSSKDIDNFRNNSSSVISTSSNISPSAAPSSSSSPPYSTYKSPYSSLYTKSPGPNANQSSSSAPQPQSSQQTPSNITPTNERSSQWPMSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQANPADSSQQLPLLLPNAVANMKPDKSFNSEKNLSGHNNNHSFSGSDYGDKKYHDEIPHSPFTDRSFEDDGFDQKNGSFGSNFPNNSNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRSIKRSPSSVESSPAFPYPHGYGQASVAAAALHDAAAREEHELKEHHRNNEHHHLPPTIPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPTNYALKYNNLRTAKHELIEHELEREREREREFVEREREREHERDMGPGRDDDENDHVEDLSVARKENNHSPLETRERPESPYTPEEPASGVNEKSVIMTTQIPPNPSADAFINDTNMKREVIIDDIRAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258994;
90% Identity: iTF_01236822;
80% Identity: iTF_01237777;