Plab018158.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- ttk
- Assembly
- GCA_949318255.1
- Location
- OX439140.1:123064625-123079779[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-19 1.2e-15 58.4 0.0 2 45 564 608 563 608 0.97 2 2 2.8 6.7e+03 -1.6 1.0 3 13 641 651 640 655 0.86
Sequence Information
- Coding Sequence
- ATGTCAGTACAGCAATTCTGTTTACGCTGGAATAATCATCAACCAAATTTCATTTCTGTCTGTTCGTCACTGCTACACAATGGCACATTGGTGGACGTTACACTGGCAGCAGAGGGTAGACAATTGCAGGctcataaaattgttttatcagCTTGCAGTTCTTATTTCCAGACCCTTTTTACAACAAATCCATGTCAACATCCAATCGTTATATTAAAAGATGTTCAGTATGATGATCTTAAAACAATGGTTGACTTCATGTACTATGGGGAGGTAAATGTGTCGCAAGAGCAACTGCCGCATATATTAAAGACGGCAgaaatgcttaaaataaaagGTCTCGCAGAAATGCCCACCGATCCTGCCAATCTAACAAAATCCGATAGTAAAACATCGAATGATGCTACGGAATTGGTCGGTGGTGGTGGTAATAATGGACAGTTGGGAGGTGGTAATAGTGGTGGTGGTAGCAGTGCAGGCGGTGGTAATAGCAGTAGTGGTGGTTTGGGTAGCAGTAGTGGCGGTGGCAGTGTTAGCGATTCAATATGGGGCAGCACCGAATCACaatttcaacaacaacaacagcagcaacaacatcagcagcaacaacatcaaCAGCATCATCAACAattgcaacaacagcaacaacatcatcatcaacagcaacaacagcagcaacagttACACACACAATTGCAAAATAGTCAAACACAAACCtcacaacaacagcagcaacaacatcaTCAGCAACAGTTAAGACGCACACCGTCTCCATTAGGCGCTGGCGCCTCACCAGCCACCAGACGAAAACGTTTAAGAAAATCCTCAAATAAcgGATCCGGTGAACGTAATAACTCCGAAGATCATAATACATCCTTGGATGCTGCCACAGCTGGAGGTTTAACTCTATCCCAAATGAGTCAGATGTCATTTAGTGGTGCAGCTACAAATAGTGCTCTCAGTGGTTTAGCTGCCCACTCTTTGCACACAGCAAAATTACTTAAAGAAACCTCTAATAATGACTTGGAAACAAATCCTCAAGATTCCGATAGTTTAGACGATACACATGGTCACGTACATATgcaaattAAACCCGAAGTCGATATGAGTGGAGTACCACAGTCTATGCCATTAGATATATCAGGACCCACAACGCCCTCGGAACATGATGCTCCAAATTCACAATCCGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCATCATGTCCTACCAATTTAATTGGCAATAACAACAATCAAAacacaaataacaacaataacaacagctcGAGTAGTGATCAACAGCAGCAGCACCAACGCCAGCAACAAGAAGCCGTTGCTAGtcaacagcaacagcagcaacaacacttgcaacaactacaacaatatcAGCACCAACAAAACTCGGCCTATTCGCCACAAATCATAACGGTCAGTGGCTATACAAATGCAGCAGCAGCGGCCGTAGCAGCGGCCCAAAATTTATCACCGCCCTCGCCCAACGATGGCAATATGGTGCAATCCGTGTACAGCCAAGGACCAACGCCCACCCAGTCACCGGTGGGCAATGCATCGGGATCCGGCGGCGGCAGCAATATGTCCGGTGGCAATTCAGCAAACAATGCCAATATCAAGCGTAAGCGTTCTGTTAATCCACAAGGTGATGAAAATTTTATAAGGGCCCTGGAGGCAGTGCGTTCGGGAGGTATAGGTTTTTGTAAAGCGGCACGTCTCTATGGCGTAAACAATCGTACTTTATGGCTGGAATATAAGAAACGCGGTTATCCTGTGTCCAGGCCCAGTATAAAATCACGTGTGGTCAAGCAAGAACCGAATCTCTCACCTTCCCCTACACCACCTGCCAATGCCACAGACGATACAAATGAGAACTACGATCAAATGGCAGCAGCGGTAGCGGCTGCACAAACAGCCGCTCTTAACATGCAAATACCACCGACTTCCGAGACACCAACACCCTCGCTGATGTGTACACCCCATCATGGTGGCACAGCCACAGGTGCTACAACACATCCTACCATGGGTGTTATGAGTTTCTTGGATACCCGCCACATGGACTTCCCAGCCAGTCTGCATTCAATGTCGCGACAGCGTTACATTGATGCCGGTGCTGGCGGTGGTGCCGGTGCGGGCACAATTAATGTTAATCCGGCAGCGGCAATGAATTTACAGAGTATTAATTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKTSNDATELVGGGGNNGQLGGGNSGGGSSAGGGNSSSGGLGSSSGGGSVSDSIWGSTESQFQQQQQQQQHQQQQHQQHHQQLQQQQQHHHQQQQQQQQLHTQLQNSQTQTSQQQQQQHHQQQLRRTPSPLGAGASPATRRKRLRKSSNNGSGERNNSEDHNTSLDAATAGGLTLSQMSQMSFSGAATNSALSGLAAHSLHTAKLLKETSNNDLETNPQDSDSLDDTHGHVHMQIKPEVDMSGVPQSMPLDISGPTTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNNNNQNTNNNNNNSSSSDQQQQHQRQQQEAVASQQQQQQQHLQQLQQYQHQQNSAYSPQIITVSGYTNAAAAAVAAAQNLSPPSPNDGNMVQSVYSQGPTPTQSPVGNASGSGGGSNMSGGNSANNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANATDDTNENYDQMAAAVAAAQTAALNMQIPPTSETPTPSLMCTPHHGGTATGATTHPTMGVMSFLDTRHMDFPASLHSMSRQRYIDAGAGGGAGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01236810;
- 80% Identity
- iTF_01237767;