Basic Information

Insect: Pollenia griseotomentosa
Gene Symbol: wdn_1
Assembly: GCA_963931875.1
Location: OZ007560.1:23553333-23563971[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.1 5.1e+02 3.2 0.4 1 21 305 326 305 327 0.90

2 8 2.4e-05 0.0039 19.3 0.7 1 23 331 353 331 353 0.99

3 8 0.11 18 7.8 1.8 2 23 365 385 364 385 0.93

4 8 5e-06 0.00083 21.4 1.0 3 23 393 413 391 413 0.98

5 8 3.9e-05 0.0065 18.6 5.1 1 23 419 441 419 441 0.98

6 8 0.00038 0.063 15.5 3.0 1 23 447 469 447 469 0.97

7 8 9.4e-06 0.0016 20.6 0.8 1 23 475 497 475 497 0.96

8 8 0.00017 0.029 16.6 2.3 1 23 503 526 503 526 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.1	5.1e+02	3.2	0.4	1	21	305	326	305	327	0.90
2	8	2.4e-05	0.0039	19.3	0.7	1	23	331	353	331	353	0.99
3	8	0.11	18	7.8	1.8	2	23	365	385	364	385	0.93
4	8	5e-06	0.00083	21.4	1.0	3	23	393	413	391	413	0.98
5	8	3.9e-05	0.0065	18.6	5.1	1	23	419	441	419	441	0.98
6	8	0.00038	0.063	15.5	3.0	1	23	447	469	447	469	0.97
7	8	9.4e-06	0.0016	20.6	0.8	1	23	475	497	475	497	0.96
8	8	0.00017	0.029	16.6	2.3	1	23	503	526	503	526	0.98

Sequence Information

Coding Sequence: ATGAAAGAAGAAGCAGAGACAAGTAGTAAATTGCCGCCTAAAATATTAATGGGTGGTGTTGGCGGTTCATCGACAATGGCAACCACAATGTTAAAAACCACCAATTCAGTCTCTATTCCCAGTCTTTATTTGTCATCCAATTCCAGTCTAAATCCCAGTACACCAAGCAAACAACAAAGTGATGAAATTCTGAGCACGTTACTGCGTATGAATAATTTTGATTCGATATCGAGCATTAAAGATGAATCGCTAGACATCGATCTGTCCGCGTGTGTAACCATAAGTGCAGACCCTTCAGGTATTATTGGCGGTAATAGTTTGTCGTCGTCGGACTTTTGGAGGGTGTTAGATGAAAGCGCCCAAACTTCACAGTTGGATATAAGCAATAGCAGTGTTGGTAATGCTGTAGGTGTCGCTGGTGGTTCCAACAGTTGTTATACCACCCAGGAATCATCGCAGACATCACCTGCATCGAGTAATGGTAATTCTATGCCCTCAAACGATAAAACTGAACTAAGGGCTATTGTGAAGAAAGAACAAACAGATTTTAGTGGGACCTTTCTTAAGCCTTCCACTGGTATTTCATTTTCGCCACTAAAACGTAGCATAAAGCCTCTGCAGGCGGAGCAACAAATACGCAAAGAAAAGTCTCCCACCAGATTGGCGAACAGAACCGAAACGGGACCTCCTTCCCTAGCTCCCATTATTCGAATTCATCAAACCTTTATAAGGCCTCAGGGGGACCTTCCAAAGTTAAGTAATGGCAATCTTGCAACACAACAAACAATGCAAAATCTCAATCAGCAAAAACAACCTATGTTGGGGTTAAACCAACCACCACCATTGGCTGCTTTAGAAACATCTACGAATAATAAAGAATCTTTATTGAAAGCCTTGTTACCTGAACCCATGTATAAGTGTCTAGATTGTGACAATATTACATTTCGTGGTGGTCAGGAACTTGCCAAACATACTAAACATCGTTTAATTTACAAATGCCCAGATTGTGAGAGGGAATTTGATATTGAAACTTCCCTgaagaaacatttaaaaactcATCGTCCTATAGATGCACGCAAGGACGCTTGGAAAAAGTGTCCCGATTGTGGAAAGTgccttAAACTTGGAAGCATGTGGATGCATCGTAAAATCCAtaccgaaaataaaaaatatggttgtgAGATATGTGGACAGAAATTTGTACAGAAGATAAACTTAACACATCACCAACGAATACATACCTCAGAAAAACCATACGAATGCTCCGAATGCCAAAAACGTTTCCAAGAACGCAGTCATTTGCAACGACATCAAAAATACCATGCACAGACCAGATCATACCGTTGCGAGAAATGTGGTAAAATGTATAAAACTGAACGTTGTCTCAAGGTACACAATTTGGTACATTTGGAACAAAGACCATTTGCTTGCACTGTCTGCGATAAATCGTTCATCTCAAATTCTAAGCTTAAGCAACATTCGAACATTCACACGGGGGAACGACCATTCAAATGTAATTATTGTCCTAGAGACTTCACAAACTTTCCAAATTGGCTAAAGCATACAAGACGTCGTCATAAAGTTGATCACAAAACTGGTGAAATGTTGGAAAATATTCCATCTTATTGTTCGAAAAAATCTACGCGTACTCCAAAGGAGAAAAAGGCCACCGACGTTAAAACTGCAGCAACTTCAGCGAAGAATAACAGCAATAACAATAGTACTCCTATAACCAACGCTATTCAAAAACCTAACGATCtcacaaaaataaacactaataaattgcaacagcaacagcaaatGCTGGCAACATTTTCAACTGCACTAACTACAACGACATCGGCGCATAATTGTACGCCTACAACAGTCTTTACTACAACAACCGTTACGAAACCCCTGTTATCAGTAACAACAAGTAGTATCAACCAACCACCTCCGTTGACAAAAGTACCGgcaaaacgtaaaaaaaagcaaactaatGTTGTAACAAAAGCGGAATGCGATGCCGTGTCAGTAACAACTGCATCAACAACGTCAACAACTAATTTTTTGGTTGCTTCTTCGTTGCACGGTAATTTGCCAGTCGTCACATCAATTGCTTGTAGTGGACCACCACCTTTAGCATTGGTATACAATACCAAACCTATTAATGTGATATGTTCAATACCAACGACAACAAGTAGCacaaatactttaaaaacaGCTTATCAACAGAAACTGCAAACGTCGCAGCAGCAATCTCAACAACAGCCACTTAAAGTGGAAAAAGTAAAGAGAGAAAGAAAACAACCCATGCCAAAGCAAGTTCAGCAGGTCCCTTCacctttaataataaaaaaggaatttataGAACCAAAATCGGAAATCAATATACAGCCACATGAACAACAGCAGGGACAGCATCAGCAACTAACTCAACAACGTttacaccaacaacaacaacaacaacaaaggtTACAGTCACAACAACAGCATCAGCAGCAACATACACCGCAACAACATACCAAAGTAGCTTTTACCGATTTACATTGTTTAAGTATTACTTCAGCCGAGGAATTGATTATGGAACAGGCTTTAGAAATGGAAGAATGTGGCCTATACAAAGCATCCTTACCCACCAGTGTTGATCATCATGTCATGTCGAATTTTGCTGATACTGACAATGCCATATCATCAGATTCTGTAGCcgatttacattttaaaattaaagaggAACATCATGATAtggatttaaaattgaaaactgaAGAATTTGatttaattaaaaaacaatccATGTGCTCTTCTCTGGAATCCTCACCATTTTCCTCACCTGCCTCTATGGACTTCGCACCATCCTCCAATTTAACTACCACAGACTtcacaacaaataatttttacctACCACCGTTTACCATTGCTAATAATCAAATCATCACCACAAATTCTCCCATAACAACAATGAGAATTGAGGATTGTCGTGGTACTGTGGCAACGGCTCATACATATTTGCCCCAACTTATTACTACAAATGTCAGTGTTCCAGATTTAATACAAATCAACAATAACAACCAGAGGTATTTGAAAGCGACCACAACGACAAGCAGCAGTGGTAGTAGCAATACAAATCCATCGTTTATAAACCAACTTTACTTGCCGTTAACGGTTAATGCTGGCCCTGTTCTTATGAAATCAAATCAAGTTTTGCCCTCTGTCGATACTTTGTTATTTTCTAATTCAAAATTGGGCCTCTTTAACAATCGTAATTTACCAAAACAAGCCACAACAGCTCAACACAATTTATCCTAA
Protein Sequence: MKEEAETSSKLPPKILMGGVGGSSTMATTMLKTTNSVSIPSLYLSSNSSLNPSTPSKQQSDEILSTLLRMNNFDSISSIKDESLDIDLSACVTISADPSGIIGGNSLSSSDFWRVLDESAQTSQLDISNSSVGNAVGVAGGSNSCYTTQESSQTSPASSNGNSMPSNDKTELRAIVKKEQTDFSGTFLKPSTGISFSPLKRSIKPLQAEQQIRKEKSPTRLANRTETGPPSLAPIIRIHQTFIRPQGDLPKLSNGNLATQQTMQNLNQQKQPMLGLNQPPPLAALETSTNNKESLLKALLPEPMYKCLDCDNITFRGGQELAKHTKHRLIYKCPDCEREFDIETSLKKHLKTHRPIDARKDAWKKCPDCGKCLKLGSMWMHRKIHTENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSTRTPKEKKATDVKTAATSAKNNSNNNSTPITNAIQKPNDLTKINTNKLQQQQQMLATFSTALTTTTSAHNCTPTTVFTTTTVTKPLLSVTTSSINQPPPLTKVPAKRKKKQTNVVTKAECDAVSVTTASTTSTTNFLVASSLHGNLPVVTSIACSGPPPLALVYNTKPINVICSIPTTTSSTNTLKTAYQQKLQTSQQQSQQQPLKVEKVKRERKQPMPKQVQQVPSPLIIKKEFIEPKSEINIQPHEQQQGQHQQLTQQRLHQQQQQQQRLQSQQQHQQQHTPQQHTKVAFTDLHCLSITSAEELIMEQALEMEECGLYKASLPTSVDHHVMSNFADTDNAISSDSVADLHFKIKEEHHDMDLKLKTEEFDLIKKQSMCSSLESSPFSSPASMDFAPSSNLTTTDFTTNNFYLPPFTIANNQIITTNSPITTMRIEDCRGTVATAHTYLPQLITTNVSVPDLIQINNNNQRYLKATTTTSSSGSSNTNPSFINQLYLPLTVNAGPVLMKSNQVLPSVDTLLFSNSKLGLFNNRNLPKQATTAQHNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045597;
90% Identity: iTF_01238003;
80% Identity: -