Basic Information

Insect: Pollenia griseotomentosa
Gene Symbol: -
Assembly: GCA_963931875.1
Location: OZ007563.1:184332218-184341372[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0067 1.1 11.6 0.1 1 21 808 828 808 832 0.91

2 8 0.0043 0.71 12.2 2.3 1 23 1426 1449 1426 1449 0.97

3 8 7.9e-06 0.0013 20.8 4.1 3 23 1473 1493 1472 1493 0.98

4 8 4.6e-05 0.0076 18.4 2.5 1 23 1499 1521 1499 1521 0.99

5 8 3.7e-06 0.00061 21.9 0.5 1 23 1527 1549 1527 1549 0.99

6 8 0.022 3.6 10.0 2.7 1 23 1555 1577 1555 1577 0.98

7 8 0.0032 0.53 12.6 0.0 3 23 1585 1605 1584 1605 0.96

8 8 0.005 0.82 12.0 3.1 1 23 1611 1633 1611 1634 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0067	1.1	11.6	0.1	1	21	808	828	808	832	0.91
2	8	0.0043	0.71	12.2	2.3	1	23	1426	1449	1426	1449	0.97
3	8	7.9e-06	0.0013	20.8	4.1	3	23	1473	1493	1472	1493	0.98
4	8	4.6e-05	0.0076	18.4	2.5	1	23	1499	1521	1499	1521	0.99
5	8	3.7e-06	0.00061	21.9	0.5	1	23	1527	1549	1527	1549	0.99
6	8	0.022	3.6	10.0	2.7	1	23	1555	1577	1555	1577	0.98
7	8	0.0032	0.53	12.6	0.0	3	23	1585	1605	1584	1605	0.96
8	8	0.005	0.82	12.0	3.1	1	23	1611	1633	1611	1634	0.96

Sequence Information

Coding Sequence: atgaaaagtGCATTAATTCATGGCAACTATAGCAATAACCTTCAATTGCTGGGAGCTCAGCAGCAGCAGACTCAACTGCCAGATCATTTAAAGTGTGGTGAAGTTTACACTTGGCTGTGTGCCGGGGAATTATATGCCGTGGAATGTAAATTATGTGAAGATCGCCCGTTGTGTCCACTTTCGGAATTTCCCCAACACATGGAAGTTTGGCACACAGATTGGCAGGATCCAAcagaacaaaattttgaagGGGACACAGATTATGAGGAGGACTCTCAAGATCATTCTGATCATGCAGATAATGATCACGATCTATCATTTGCCACCGAAGACAGTGGTTTATTTGAATCCGAAGATCAATTACAAAATGAAAGATCAACAAGCCCAGAAGAACAACAAGATATTTTAGAAATTCTAGAACCTTTCGAACAGGTATTAATTGAACAAGAAGACAATTCTCTAGATTCTATACAAATTAGCGAAGATGTTAATGATGATGTTAATAATGAAGATACAAACGAACAGGTAGAAGCAGCAGTAGCAGCAGAGGccaaacaatataaaattgaaaacaaacacaatgcaaaacaacaacactacgattttaaacaaacatttaaaaacagcaacaaaGAGCAGCAAGTTCTTAAACAAGAAATAACAGAAAACGAGAGAGGATtatgtaatttaaaagaaatcgaAGAGAGAGgaaaaaataacagttctttaagaaatttaaaaagtataaataaaagagaaagaagtcaaattaaagaaacatttaatgaaaatgaaacagAACATAATAAAACCAACAAAGAATCAAGTAAAGCTAAAAGGAAatcaaaagaaattgaaaaagaatccaatggaattgaaaagaaaacaaaagaaactgAAGAAGAAACAAGTGAAAGTGacaatgaaaatgaaaatgaaacagAAACAGAGCAAAgtaaaacattaaaagaaaTACGCGAAAGTGAAAAcgaattaaaagaaaacgaaaaagtatttaataaaattaaagaaaaaaccagTAAAATTAAATGGGATACTAGAACAAGTGCAATTGAAAAAGAAACAAGTGAAACATTCGAAACTGAAAGGAAAGGAACAGATAAAAGTGAATCGTGTAAAAATGTAATGcatttaaaagaaattgaaaagGAAACAAATGCTGCTAAAAattcaaaaataaattccaTAAACACGAAAAAATTCGGCTCGAAAGATTCTAGTACGCctgttaagaaaacaaaaaaagaaattttaagtgAAACAAGAGAAGATGAGGATCAAGATCCTGTAAATTTCGGTTTAAAGAAAACCCGAAAATCTTGCCGTGAAGCTTTTACAGGAACatccaataataaaaaatcgaaaagaAATTTAAGAACTAAGGTCGCAAAAGCAAAACAGTTTATTTGTAACGAAAGAGAAACAAATTTCCAAAAcattgaaaaaacaaataaaaatataaagcaaaCTTTGGTTACTTCATATTTTGGGAGCAAAGATCGCAAAGCTGGTAAAGAACATCATCCAAATGAAGAAAATTTAGCAAACTTTATGAATAAAACACAACTTTTACAAACCTCCGAAAAATCTAAAGATACTAAGCAAGATTCTattaactctttttctaatcCTACCTTTTCTGAACAACTTAACTTCCAGGGGTGTTTCGCTATTAAAGATACCTCTTCATCCTTAATATCCGAATCTTTATCTCCTATTTCGCCTAAAACCGAAGAAGAACATTTTGAATTCTATGAGCCCAAAGAGAAACTTAACAAAAATCATATAAGCCATTTGATTAAACTCTACCAGGAACATCCTCGCCTGTGGGATCAGTCACACCCAGACTTTTGCGAACCCCAGGTTTGTCGCAAGTCCTGGCAACAGATCACTGAACAATGGAATGAATTTTGCAAACGTAAATTCACCATTGCCGAAGTGCGCATACGTATTTGTACTCTCTGCCAACGTTATGTGCAGGAAAGAGAACGCTTAGCTTTAGAGGGAGAACTAGATGAGTATGCTAAGTTTCCCTATTACGatcaaatgaaatttttggaacaacaaaaatccctacaaaagaGACGTGAACTTTACGAACAACAAAAtgagaaaatattgaaaatttttcaaaattttcccgTTCTCTGGCATGTCAGTTGTTATAAATCCCGGCAAGCCAAAGAGAGAGCACAGGCTTTTGAGAGCATAAGCAAGACATTAAAATTATCTGGTTTACACTTGTCCCCAGTGGGAGTCCAAAAACGAATACGTTCTTTAAGGAAATGTTATCGTTTGGAGAAAATCCGCTTTTTGCATGCTCAGGTGGAACGAATTCCCTTTGATTCGGAATTTAGGCATTACAAGAGAATGCAATTTATGGATAAACATGTTGACCCATTTGTTTGTCGGATTTGTGGTAAAATCTTTGAAAATTTACAAGGTTATCGGGAGCATTTGGAGGCGGAAAATCATGGCAGTATATTGCAAGAGGAAAGCGAAAATGAATACGATTTGCATGATAAAGAGAAGGGGGAAAAAGATAATATTGAGATTACAGCCGAAGAAAATGTGGAGATAACAAGCCCGTATAGAGATGATTCACAAACTATAGTTTTCTCTCCCATTAGTAGCCATAGTGAATGTATTTTGGAATCGGAAAACTCTCGAGatattttacaaacatttacaGCCATAACCTCCACACCAAATTCGGCTTTATATACAGAAACTCCAGAAAAATCCTCTTTTACCATACAGGAAGTTTTACAATTTCCTTCAAATACTCCACATGAACCGATAATAAATTCTTTGAATTTACATGATCATCTCATAGAGGAGATTATGGAAAACGTTACCAACAATGATAGCTATACCAAACAATCATTGGATCAGtttattgatTCGGTCACAACTTGTGATACATTATTTGCCGATAATTGTGTAATCGAGCAAACTTTATCTACTCATCTTTTCCATAcggaaaattcatttgttgtgGAACATCCCGACATAGTAGCAGATGAAACCTGTAGTGAATTTGGTACAAAGCAAAATATGGTATCGTTTTCTCCTGTCGTAATGCATATGGAAAACACTTTTGTTGTGGAACATTCTGATATTGAAACGGAAGgaactttgagtaatttaagtCCAAAAACACATGTGGATGGAACTTATGCCTCAAATGCTATGAATGCAGAAAACTTTAGTGTAGCGAAAGATGCAAAAATAATTTCCGATCCAGATATAATAGCAGATCCGATAGTTTCAGATCAATCAGTGTTTGGAAACGATTCTGTGCAAGCTTCAGATCCGGTTATAGTAACAGATTCTATTTTAGAAAATGATTCTGTTTTAGCAACACAACATTTCTCAGAAGTTTTAAGTCCACAGCCAACGAGTACAGAAAACATTTCTGTAAAGGAATTAGAAAATCAACTAAATGCTCAACACGATGCAGGAAATCTCCCTTCTTTCGCTTCTTTGGTTAACCAAGTTCAATGTGATGACACATATCTCAAGCTAAACACGGAATTTCCTGAAACTTCAAATCCAACTCTTAATGAATCCGACAATGAAAATTACTCTTCTGCCGAAATTTGCACTATACCCTTACCCGATCatttaatacacaaaatgaTTGAACTTTATCGTAAATATCCTCAGTTATGGAATCCCAATCATTTGGATTATAATTCACGCACTTTAAGAAGACAAGCCTGGTGTTCGCTTACAAAGGAATACAATTCAACAGTGGGTAAACAGTTATCCTGGCGCACCTTGCATCGCAAGCTGACGGACTATGCCAAGTACTACAAGAAATTGATAACAGAACAGAAGCACTACGAGCAACAGGAAAATAAATGGACTTTCTATGAGGACTTCAAGTTTATGGATGATGTGATAACCGTTAACGATGAACTGCAACGCAGTGTCCATCATCGtgataataatttcaaaattatagCAATTTATAAGACGCTGCCTCAGCTTTGGGATATAAAACAAGTTGACTATAATAAACGTTCCATCAAGCAGCGTAATATTGAGTTAATGTGCAATTTACTGCAGGAGGAACATAATTTGCAATTGACAACTGAGCGTTTGAAAAATCGTTTGATTGAGTTAAGAACCCAATACAGATCAGCCAAAAAGCAACGCTTGAAATGTGAGAAAAACCAGCAAAAATTTTCCTCTTCTGAATTTGAGTTCTATGAGGCCCTCAACTTTCTCGATAATCATATAGATCCCTTTATCTGCGATAAATGTaaaatggaatttaaaaaacttaccgATTTTAATCAACATCTCAAGAAAGAACATTCAGCAAAGTCCCATCTAAAAAATCGCCCTGCAACTTTATTATCCCGAAATTCTGATGTGGAAAATATTTGCCATATATGCGGTATTAAGTTCACTACACGCAGTAATTTGCTTCATCATATTAAGCGTCACGAGGGCATACGCAATTACGAATGTACTATATGTTCGAAGAGGTTTTATGCTTCTCATTCGCTCAAAGTGCACATAAGATCCCATACCAAGGAATGTCCTTATACCTGTGAAAAATGTGGCATATCCTTTGTAAGTGCCAGTAAATTGAATCAACATGTTAAACGTCACTTGAATAAGAAAGATTTTCCCTGTGATTTTTGTCCCAAGGCCTTTTTTACGGCCTTCGAAAAGCACCGTCATGAGAGAAGACATTTAAATATACGCGATAAAGCTTGCCCGATTTGTGGCAAAACATTTGTGGCCGGTTCCTCGTATTATGCTCATTTGATGTTGCACAATGATAAAAAACGTTTTGAATGTGATAAATGCGAAATGAAATTTGCCCAGTACGCAGGGTTGTATAAGCACAAGAAAAGACATCATTCGTGA
Protein Sequence: MKSALIHGNYSNNLQLLGAQQQQTQLPDHLKCGEVYTWLCAGELYAVECKLCEDRPLCPLSEFPQHMEVWHTDWQDPTEQNFEGDTDYEEDSQDHSDHADNDHDLSFATEDSGLFESEDQLQNERSTSPEEQQDILEILEPFEQVLIEQEDNSLDSIQISEDVNDDVNNEDTNEQVEAAVAAEAKQYKIENKHNAKQQHYDFKQTFKNSNKEQQVLKQEITENERGLCNLKEIEERGKNNSSLRNLKSINKRERSQIKETFNENETEHNKTNKESSKAKRKSKEIEKESNGIEKKTKETEEETSESDNENENETETEQSKTLKEIRESENELKENEKVFNKIKEKTSKIKWDTRTSAIEKETSETFETERKGTDKSESCKNVMHLKEIEKETNAAKNSKINSINTKKFGSKDSSTPVKKTKKEILSETREDEDQDPVNFGLKKTRKSCREAFTGTSNNKKSKRNLRTKVAKAKQFICNERETNFQNIEKTNKNIKQTLVTSYFGSKDRKAGKEHHPNEENLANFMNKTQLLQTSEKSKDTKQDSINSFSNPTFSEQLNFQGCFAIKDTSSSLISESLSPISPKTEEEHFEFYEPKEKLNKNHISHLIKLYQEHPRLWDQSHPDFCEPQVCRKSWQQITEQWNEFCKRKFTIAEVRIRICTLCQRYVQERERLALEGELDEYAKFPYYDQMKFLEQQKSLQKRRELYEQQNEKILKIFQNFPVLWHVSCYKSRQAKERAQAFESISKTLKLSGLHLSPVGVQKRIRSLRKCYRLEKIRFLHAQVERIPFDSEFRHYKRMQFMDKHVDPFVCRICGKIFENLQGYREHLEAENHGSILQEESENEYDLHDKEKGEKDNIEITAEENVEITSPYRDDSQTIVFSPISSHSECILESENSRDILQTFTAITSTPNSALYTETPEKSSFTIQEVLQFPSNTPHEPIINSLNLHDHLIEEIMENVTNNDSYTKQSLDQFIDSVTTCDTLFADNCVIEQTLSTHLFHTENSFVVEHPDIVADETCSEFGTKQNMVSFSPVVMHMENTFVVEHSDIETEGTLSNLSPKTHVDGTYASNAMNAENFSVAKDAKIISDPDIIADPIVSDQSVFGNDSVQASDPVIVTDSILENDSVLATQHFSEVLSPQPTSTENISVKELENQLNAQHDAGNLPSFASLVNQVQCDDTYLKLNTEFPETSNPTLNESDNENYSSAEICTIPLPDHLIHKMIELYRKYPQLWNPNHLDYNSRTLRRQAWCSLTKEYNSTVGKQLSWRTLHRKLTDYAKYYKKLITEQKHYEQQENKWTFYEDFKFMDDVITVNDELQRSVHHRDNNFKIIAIYKTLPQLWDIKQVDYNKRSIKQRNIELMCNLLQEEHNLQLTTERLKNRLIELRTQYRSAKKQRLKCEKNQQKFSSSEFEFYEALNFLDNHIDPFICDKCKMEFKKLTDFNQHLKKEHSAKSHLKNRPATLLSRNSDVENICHICGIKFTTRSNLLHHIKRHEGIRNYECTICSKRFYASHSLKVHIRSHTKECPYTCEKCGISFVSASKLNQHVKRHLNKKDFPCDFCPKAFFTAFEKHRHERRHLNIRDKACPICGKTFVAGSSYYAHLMLHNDKKRFECDKCEMKFAQYAGLYKHKKRHHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -