Basic Information

Insect: Pollenia griseotomentosa
Gene Symbol: zfh1
Assembly: GCA_963931875.1
Location: OZ007563.1:77478431-77499366[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.021 3.6 10.0 0.1 2 23 242 264 241 264 0.91

2 10 2.4 4e+02 3.5 0.0 6 23 273 290 273 290 0.95

3 10 0.00015 0.024 16.8 0.4 1 23 296 319 296 319 0.97

4 10 0.0011 0.18 14.1 4.8 1 23 329 351 329 351 0.99

5 10 4.9e-05 0.0081 18.3 3.8 2 23 358 380 357 380 0.94

6 10 7.8e-05 0.013 17.7 3.6 1 23 386 408 386 408 0.96

7 10 4.2 7e+02 2.8 0.9 2 23 417 438 416 438 0.93

8 10 0.0063 1 11.7 0.5 2 23 444 466 443 466 0.88

9 10 3.2e-06 0.00053 22.0 0.4 2 23 473 494 472 494 0.96

10 10 7.6e-06 0.0013 20.9 1.8 1 23 500 523 500 523 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.021	3.6	10.0	0.1	2	23	242	264	241	264	0.91
2	10	2.4	4e+02	3.5	0.0	6	23	273	290	273	290	0.95
3	10	0.00015	0.024	16.8	0.4	1	23	296	319	296	319	0.97
4	10	0.0011	0.18	14.1	4.8	1	23	329	351	329	351	0.99
5	10	4.9e-05	0.0081	18.3	3.8	2	23	358	380	357	380	0.94
6	10	7.8e-05	0.013	17.7	3.6	1	23	386	408	386	408	0.96
7	10	4.2	7e+02	2.8	0.9	2	23	417	438	416	438	0.93
8	10	0.0063	1	11.7	0.5	2	23	444	466	443	466	0.88
9	10	3.2e-06	0.00053	22.0	0.4	2	23	473	494	472	494	0.96
10	10	7.6e-06	0.0013	20.9	1.8	1	23	500	523	500	523	0.98

Sequence Information

Coding Sequence: atgatttgcCGTTTATGTTTAAAAGACATTCCAAAAGAATCAAGTattaaattgtatgaaaatttagATCTAACGTCCGAATCCATAGAAATGGTAAAACTAATAGACAAGTATCTGGAAATCGAGatAAAACATAACGACATTGTATCCACTATAATATGTCAAGATTGCTATGATCACTTGGATGAGTTTCATCAATTTTCGCAACAAGTGGCCGAGAAGCAATTAACACTGCGTAATGAGTTTTTAGATGtgaatttaaagaaagaatataattttgatGATAATGACCACGATTGGGACAATGATGATCATGAGGATAAATTTCCATTGGAAGCAAAAGAAACAACAGAAGAGCTGACCGTAAATTGTCCCATTAGTATGTTCAAAGATGAAACGGATAATGATGAAAAGGATGAGCAGGAAGTGCCTACAGAGGATTTGCTTGATGTTGGTATGAGTAATGATGAGAAGGACATTATAGCACCAGATAGTGTTGCACCAAATGCAGATTTAGACTACATACCAGATCAAATATCTTTAGATGGGGATGACGACGAGGATGACGATGATGTACcattaattaagttaaaatctCTTAAGAAAGCTGCTCCCAAAAAGAAACGTAAAAAAACTACAGCAAAACCGCGCGaacctaaagaaaaaaaaccggCTAAAAAGAAATTGTCGGCGGAAAAAGAATTGGCCTTAATGATGGAGCTCACGTGTGACATTTGTCAAACTCGTGTCGAAACATGGAAAGCTTTGAGAGAACATTTCCTACTAGCACACACTAAAACACCATACATTAAGTGTTGTGACATAATCTATCGTAAACCACGAGCTCTTATGGAACATCTTGATTGGCATAAAAACCCTGATATGTTTAAgTGTCAAATTTGTGATAAAAATATGTCCAGTGCCCGTAATTTAACCATACACATTACATCAGAACATCCCGATGATACTGACATGATCGAATTTTACGAATGTGAACATTGTTCCAAACGTATACGTaactataatttatttaaaaagcatttaCGTTCCCACAACAAAGATAAGGAAGTTGAATGTCATATTTGTAACAAAAGattTACAACCGGCTTCCATTTAAAGCGTCATATCACTAACATTCACAAGAAAGTCGCTCCTCACGTCTGCGATATTTGTGGTCGtacttacaaaaataaaaacgctTTTCAACATCATTATAATGCACATCAAGGTATTGTTTCTCAAGCCGTACAATGTTCGATATGTCATACATGGCTTAAGAATGAAAATGTCTTAAGTTTACATCGATTAACTCATGAGGAACATCCCACGCCTTGCGATGTTTGTGGGAAAATGCTCAAAACACAACGTAGATTATATAGACATAAAGTTTACTGGCATACATTGGATACAAATTTGCAATGTAGTTTTTGCGATAAAGTCTTTCGAGAAAAGCGAAATCTTGAGGAACACATGGCCATACATACCGGCGTGCAACTTTATACGTGTCCCCATTGCGGCAAAGACTCACGATCGaaatcaaatatgtatgtacatattaaaaggATACATCCAAATGAATGGTGGAAATCAAAAATGGAACGTTTAAACTTAAAACCTAAGGATATAATTCAGGAGGACAAACGTCAATAG
Protein Sequence: MICRLCLKDIPKESSIKLYENLDLTSESIEMVKLIDKYLEIEIKHNDIVSTIICQDCYDHLDEFHQFSQQVAEKQLTLRNEFLDVNLKKEYNFDDNDHDWDNDDHEDKFPLEAKETTEELTVNCPISMFKDETDNDEKDEQEVPTEDLLDVGMSNDEKDIIAPDSVAPNADLDYIPDQISLDGDDDEDDDDVPLIKLKSLKKAAPKKKRKKTTAKPREPKEKKPAKKKLSAEKELALMMELTCDICQTRVETWKALREHFLLAHTKTPYIKCCDIIYRKPRALMEHLDWHKNPDMFKCQICDKNMSSARNLTIHITSEHPDDTDMIEFYECEHCSKRIRNYNLFKKHLRSHNKDKEVECHICNKRFTTGFHLKRHITNIHKKVAPHVCDICGRTYKNKNAFQHHYNAHQGIVSQAVQCSICHTWLKNENVLSLHRLTHEEHPTPCDVCGKMLKTQRRLYRHKVYWHTLDTNLQCSFCDKVFREKRNLEEHMAIHTGVQLYTCPHCGKDSRSKSNMYVHIKRIHPNEWWKSKMERLNLKPKDIIQEDKRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01177211;
90% Identity: iTF_01236016;
80% Identity: -