Basic Information

Insect: Pollenia griseotomentosa
Gene Symbol: zfh1
Assembly: GCA_963931875.1
Location: OZ007563.1:121147591-121149235[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.032 5.3 9.5 0.9 3 23 220 241 218 241 0.93

2 10 0.065 11 8.5 2.7 6 23 251 268 245 268 0.96

3 10 2e-06 0.00034 22.7 1.7 1 23 274 297 274 297 0.97

4 10 0.00016 0.026 16.7 0.1 2 23 307 328 306 328 0.97

5 10 0.0061 1 11.7 0.4 1 23 334 357 334 357 0.94

6 10 0.018 3 10.2 2.5 2 23 362 383 361 383 0.95

7 10 0.03 4.9 9.6 0.1 2 23 392 414 391 414 0.93

8 10 0.00033 0.054 15.7 0.1 1 23 421 444 421 444 0.97

9 10 5.7e-05 0.0094 18.1 0.9 1 23 450 472 450 472 0.98

10 10 2.8e-05 0.0046 19.1 7.6 1 23 478 501 478 501 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.032	5.3	9.5	0.9	3	23	220	241	218	241	0.93
2	10	0.065	11	8.5	2.7	6	23	251	268	245	268	0.96
3	10	2e-06	0.00034	22.7	1.7	1	23	274	297	274	297	0.97
4	10	0.00016	0.026	16.7	0.1	2	23	307	328	306	328	0.97
5	10	0.0061	1	11.7	0.4	1	23	334	357	334	357	0.94
6	10	0.018	3	10.2	2.5	2	23	362	383	361	383	0.95
7	10	0.03	4.9	9.6	0.1	2	23	392	414	391	414	0.93
8	10	0.00033	0.054	15.7	0.1	1	23	421	444	421	444	0.97
9	10	5.7e-05	0.0094	18.1	0.9	1	23	450	472	450	472	0.98
10	10	2.8e-05	0.0046	19.1	7.6	1	23	478	501	478	501	0.97

Sequence Information

Coding Sequence: ATGTCTGTAAGCGGTTTATGTCGCTTATGCCTTTGTCCTTTCCAAGATGATCATAAAAAACTAATCGATGACAGCGGAGCTTGCAGAGACGCTTATGATATTGCTAGCAAGTATTTTGATCCAATGCTTTTACAAGCCGGGCAAGAACACAATGCTCCAGTTTTATGCTTAACTTGCTGGCGGCATATAGAAGATTTCcattattttcaacaaaaaatatttgaggcTCATTCAAAGTTGGAAGATGTCAAAGAAATTGTTTCGTTTGTTAAGGTTGAAGTCGAGCAAGTCGATGACAAAGCTAATACCTCAACGGATGATCTATTGGATAAGCAACTTAAAAATGAAACGAATGCATCTTTAATGGAAACCTATGACTTAGAAGATGATAATACATTGAGTTCTGAGGATGACAGACTTTTAATGGAAATACAGCAAAACGTTaaggaaaaaagtaaaaccaGAAAGAAGCGAATAAGCAGACGTAAAACACAAATGTTAGAAATTTCAAAATCTAATTCAAAACCCGATATGTTAATTGATTCAAGCTTGTTAGATAATAGCGTCGACAATTGTCCTCTAAGCGATAAAACAGATGCCCAACAAAAAACCTTGGAAAATGATGCTTTTATAGCTGCATGGAGAAGTGAATTGGATTGCGTTAAGTGCAGAGCAACATTTGCAAATTTTACTTTACTACGCAAACATTTTCTGAGAGACCATTCAGACGAAAAATGCTATATTGTATGTTGTGATCGAAAATTCCGCAGTCGTTATCATATAGTCGAACACATACGTTTGCATATGGATCCAAATGCTTATCGTTGTGATGTTTGTGGTAAATGTAGCACCAACAGCAGAAACTTAGCCAAACATATTAAAGAACTGCACAGTGAAGAAGGCAAAAATCGTAGCTTAGAGTGTCCCACATGCTTAAAGGTTTTAGCCAATAAGAATTCATTGAGAGTTCACATGGAAACGCATGAAACCAATTTAACTTTTGTTTGTCGCGAGTGTGGTAAAGGTTTCCCTTCTGAACAAAAACGTACACTACACGAACGTTATGTTCATAATGCTACTCTTATTTGTGATCAATGCGGAAAATCTTTACACAATCACTATGCCATGAGACAACACCTTCTGCAGCATTCCGGCGTTCAAAAACGAAAGTGGCCTTGTGACATGTGCAGCGCAGAACTGAATTCACGTTCTGGCCTGAAACGTCATAAGCAGCTTATACACCAAGATGGCTCAACGGTGTATGTGTGCAGTGATTGTGGTAAAGTTGCTACCACTGAAATAGCCCTCCTCAcgcacaaaagaaatgttcATTTATCAAGCCGCAACCATAAATGTGCACTCTGCGACAAAGCCTTTAAATTTCCCAGAGTTTTGCGAGAGCATATGGCAACGCATACAGGTGAGGATCTATATAATTGTCCTCACTGTGACAAAACATTTAAGACAAATGCTAATATGCATCATCATCGTAAAAAAGCACATCCTCAAGAGTGGGCTGAGGGTCGACAAAATAGACCACAAGTTacgaaagttaattttaatctaGTGCAAAATGAAGTTGTTATTTAA
Protein Sequence: MSVSGLCRLCLCPFQDDHKKLIDDSGACRDAYDIASKYFDPMLLQAGQEHNAPVLCLTCWRHIEDFHYFQQKIFEAHSKLEDVKEIVSFVKVEVEQVDDKANTSTDDLLDKQLKNETNASLMETYDLEDDNTLSSEDDRLLMEIQQNVKEKSKTRKKRISRRKTQMLEISKSNSKPDMLIDSSLLDNSVDNCPLSDKTDAQQKTLENDAFIAAWRSELDCVKCRATFANFTLLRKHFLRDHSDEKCYIVCCDRKFRSRYHIVEHIRLHMDPNAYRCDVCGKCSTNSRNLAKHIKELHSEEGKNRSLECPTCLKVLANKNSLRVHMETHETNLTFVCRECGKGFPSEQKRTLHERYVHNATLICDQCGKSLHNHYAMRQHLLQHSGVQKRKWPCDMCSAELNSRSGLKRHKQLIHQDGSTVYVCSDCGKVATTEIALLTHKRNVHLSSRNHKCALCDKAFKFPRVLREHMATHTGEDLYNCPHCDKTFKTNANMHHHRKKAHPQEWAEGRQNRPQVTKVNFNLVQNEVVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236029;
90% Identity: iTF_01237955;
80% Identity: -