Pame029895.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- pnr_4
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000554.1:645214-648030[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.92 4.5e+03 -1.4 0.5 12 23 158 167 157 174 0.70 2 2 5.7e-17 2.8e-13 50.5 2.4 1 35 233 266 233 267 0.98
Sequence Information
- Coding Sequence
- atgggaaacttgccaccagcacgaataacaccagcacgaccatttatcaactctggcgttgacttttgtggaccattttggattcactataaaactcactgtattaaagttccgctcatgcaaaaatccataacgaatgtacgtccagagggattgcatttcacttcataccacttcggaggcttatgggaagcggcggttaagtccgcaaaacatctgctagtaaggagtgtatcaacagcaacattgacgtacgaagaacttgatactgtggtaatagagatagaaggtattctcaactctcgcccaatcagtcccatgtcagacaatccaaatgatttggcggcactcactccgggtcattttctcatcggggaacctataaatacacaagccaacatcggagatacacagccaaacaccaacctgttgactagatggaagttggtcactcatgtcaaagaggaattctggagaagatggtcacgcgagtatctttgtgaactgcagtatcgccataagtggcaaacacaaaaaaaaaacataagacctggtgatatggtcatcataaaagaagataacacaacacctttacaatggcctttaggaaggattgtaaaggtacactatggagatgatggctttgcacggCCAAAAGTATGTATTATGCAAAGTGGAATTCAAAGAGATATGTCCTGTTCAAATTGTGGAACTGTTACAACGACAATTTGGAGAAGAAGTATACGTGGTGAAATTGTGTGCAATGCATGCGGCTTGTACTTCAAACTACATGGCAAAAATAGACCACATTCTATGAGAAGGGATACAATACACACACGACGTCGGCGTCCCAGGGACTCTGAAAAATTAGAAAAGAAAACTGAGTTTTGA
- Protein Sequence
- MGNLPPARITPARPFINSGVDFCGPFWIHYKTHCIKVPLMQKSITNVRPEGLHFTSYHFGGLWEAAVKSAKHLLVRSVSTATLTYEELDTVVIEIEGILNSRPISPMSDNPNDLAALTPGHFLIGEPINTQANIGDTQPNTNLLTRWKLVTHVKEEFWRRWSREYLCELQYRHKWQTQKKNIRPGDMVIIKEDNTTPLQWPLGRIVKVHYGDDGFARPKVCIMQSGIQRDMSCSNCGTVTTTIWRRSIRGEIVCNACGLYFKLHGKNRPHSMRRDTIHTRRRRPRDSEKLEKKTEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -