Pame029894.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- pnr
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000554.1:636379-640940[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8 1.4e+04 -3.0 0.2 8 23 31 46 29 46 0.61 2 2 2e-17 9.9e-14 51.9 2.4 1 35 90 123 90 124 0.98
Sequence Information
- Coding Sequence
- ATGCGTAAGTGTTTATTATGCGTTAAGGAAGAACTGCCTGGCAACGGTACGTTTTTTAAACCTCCAAAAATCGGTACAATGAGTCAAAAGTGGAGTAAGTTGTGCAGGAAGGAATTTAATTCAGCCACAAGAATTTGTATTGACCACTTTTCAAAAAACGATATCCTAGCTCTGGGACGGTTAACTCGTTTGTTGCCAAAAGCTTTGCCAATAGTGCCTGAGCCAAAAGTATGTATTATGCAAAGTGGAATTCAAAGAGATATGTCCTGTTCAAATTGTGGAACTGTTACAACGACAATTTGGAGAAGAAGTATACGTGGTGAAATTGTGTGCAATGCATGCGGCTTGTACTTCAAACTACATGGCAAAAATAGACCACATTCTATGAGAAGGGATACAATACACACACGACGTCGGCGTCCCAGGGACTCTGAAAAATTAGAAAAGAAAACTGAGTTTTGA
- Protein Sequence
- MRKCLLCVKEELPGNGTFFKPPKIGTMSQKWSKLCRKEFNSATRICIDHFSKNDILALGRLTRLLPKALPIVPEPKVCIMQSGIQRDMSCSNCGTVTTTIWRRSIRGEIVCNACGLYFKLHGKNRPHSMRRDTIHTRRRRPRDSEKLEKKTEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01235806;
- 90% Identity
- iTF_01235806;
- 80% Identity
- iTF_01235806;