Basic Information

Insect: Pollenia amentaria
Gene Symbol: -
Assembly: GCA_943735935.1
Location: CALSEV010000091.1:1538817-1548290[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0023 0.26 13.0 0.2 1 23 1519 1543 1519 1543 0.91

2 8 0.0064 0.73 11.6 2.3 1 23 2172 2195 2172 2195 0.97

3 8 1.2e-05 0.0013 20.3 4.1 3 23 2219 2239 2218 2239 0.98

4 8 0.00018 0.021 16.5 3.0 1 23 2245 2267 2245 2267 0.99

5 8 5.2e-06 0.00059 21.4 0.7 1 23 2273 2295 2273 2295 0.99

6 8 0.033 3.7 9.4 2.7 1 23 2301 2323 2301 2323 0.98

7 8 0.0047 0.54 12.1 0.0 3 23 2331 2351 2330 2351 0.96

8 8 0.0074 0.84 11.4 3.1 1 23 2357 2379 2357 2380 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0023	0.26	13.0	0.2	1	23	1519	1543	1519	1543	0.91
2	8	0.0064	0.73	11.6	2.3	1	23	2172	2195	2172	2195	0.97
3	8	1.2e-05	0.0013	20.3	4.1	3	23	2219	2239	2218	2239	0.98
4	8	0.00018	0.021	16.5	3.0	1	23	2245	2267	2245	2267	0.99
5	8	5.2e-06	0.00059	21.4	0.7	1	23	2273	2295	2273	2295	0.99
6	8	0.033	3.7	9.4	2.7	1	23	2301	2323	2301	2323	0.98
7	8	0.0047	0.54	12.1	0.0	3	23	2331	2351	2330	2351	0.96
8	8	0.0074	0.84	11.4	3.1	1	23	2357	2379	2357	2380	0.96

Sequence Information

Coding Sequence: ATGATGAATAGTGCATTAATTAATGACAACTATAGCAATAACCTTCAATTGCCGGGAGCTCAGCAGCAGCAGACTCATCTGCCAGATCATTTGAAGTGTGGTGAGGTCTACACTTGGCTGTGTGCCGGGGAATTATATGCCGTGGAATGTAAATTATGTGAAGATCGCCCATTATGTCCACTTTCGGAATTTCCCCAACACATGGAAGTTTGGCACACAGATTGGCAGGATTCAACAGAAAATTTTGAAGGGGATACAGATTATGAGGAGGACTCTCAAGATTATTCTGATCATGCAGATAATGATCACGATCTATCATTTGCCACAGAAGACAGTGGTTTATTTGAATATGAAGATCAATTACAAAATGAAAGATCAACAAACCCAGAACCACAAGATATTTTAGAAATTCTAGAACCTTTTGAACAGGTATTAATTGAACAACAAGACAATTCGCTAGATTCTATACAAACAAGCGAAGATGTTAATGATTATGTTAATAATGATGTTGATAATGAAGAACAATATTCAGAAGATGCAAATGAGCAGGTAGAAGCAGCAGCAGTAGCAGAGGCTAAACAATCTCAAATTGAAAACAAACACAAAGAAAAACAACAACACTACGATGTTAACAAAACATTTAAAAACAGCAACAAAGAGCAGCAAGTTCTTAAGCAAGAAATAACAGAAAACGAGAGAGAATTCTGTAATGTAAAAGAAATTGAAGAGAGAGATCAGGAATTAATTCTTAATGAAACTGATTTAATACAAAATCTACAAAGAGACACAAAATTCAATAAAAACCAAAAAGATTTTCAAAACATTTTAAATAAAAATATAAATTTTGAAAAAAATTTAAAAACTAAAAAATCTAACAACGAAAATTTAAAAAATGTAACAGAAAATGAAAATACAAAAGAAGTAATAGAAAAAAAACTTTTTGAATTACCAAGAAAATTTAAAAAATCTAGTAAAATAACTGAAGGTGTTGAAGAAAATTTGAAAAAAATTCACAAAATCAAAAGAGCTTTAAATAAAATTGTGAAAGAAATTGGAAATATACAAGAATCCAATAAAATTGAAGCGACAGAAATTGAAACTAGTGATTTAGAATTAAACAAAAATTATAAAAATTTAATAAAATTAAAAACTTTAAAAACAAATAAAGCAAAACGCATTAAAAATATTACAAAATTAGGAAAAAATAAAAGTGCTTTGAGAGATTTAATACGAATAAATAAAAGAGAAAAAACTCAAATTAAAGAAATCTTTAGTGAAAATGAAACAGAATACGACAAAACTACAAAAGCATCAAGTGAGGGTGAAAGGAAATCAAAGGAAATTAAAAAAGAATCCAATGGAATTGAAAAGGGAACAAAAGAAACTAAAGAAGAAACAAGTGAAAATGAAACAGATCAAAGTAAAATATTGAAAGAAGAAAGCGAAAGTGAAAAAGAATTTAAAGAAAACGAAACAGAATTTAATGAAACAAAAGAAAAAACCAGTAAAATTAAATGGGATGCAAAAGAAATTGAAAAAGAAGAAATAACTAGAACAAGTGCATTTGAAACGGAAACAAGTGCAACTGAAAGTGAATCATTCGAAACTGTAAAGAAATTAAAAAAAGGTGAAGGAACAAATAAAAGTGAATCTTGTAAAAATGAAAGGCAATTAAAAGAACATGAAAACGAAACAAATGCTGCTAAAAGTAACATCTGTGATAACAAAAGACAAGCAACAGGATTAAAAAACATTACAGAAAATGTGGAAGAAATAAACATCATAAACGATTCTTCTCAAACAAGCGAAAACATACCGAAAACATTAAAAGTAAATTCTAAAACTTTCTCTGAAATGCCAGAATATAAAAAAGAAAAGAGAATAAATGAAAACGAAACAACTAAATCAAAAACGAATACAAATAGTTTTTCTGAACATGAAACAAGTGAAAATGAAACAGAAACAGAAAGAAAAAATAAAAGTAAAATTGGAACATCTTTGGATAGAAACAATGTTGAAAAAGAAATAACTGCAAACAAAAGAAACTTAAGTAATAATAACATAAAGCGGGATACAAATAAAACAGTTTTGAAAAATGAACGAAGAGGAAATGAAAAAGAAACAAAAGAAAATGAAAGCGTAATAGAACAGAATGATATGGAACAAAGTGAAAATAAAGTAAACAAAAGTGAAAATAGAACAGAGCAAGCTAAAAATGAAACAGATACAGATAAAAGTGTAAAAGCTGCAAATAAAATAAAAAGAAAACTAAAAATACAAATGAAGGAAACAGATGAAAAATCTCTTGATAAATTTGGTTTGGAACTAAATGAAAAAGTAACCGGTATAAGTGAAAATAAAACCACTTATTTTAGAACTTGTGAAATAAACAATAAAATTACAGAATGCAACAAAGAACAGAGGACAACAACACTTAAGATTTCAAAAGATCAATATGAAAATGAAACTGAAAGTAAAGGAAATAAAACATTGGATAGAAAATCCAAAGAGAATATGAACCAACATCCAGAAAATCAAGGCGAAATGAGAGAAATTGAGGCAAGTGAAACTAACACTAATGAATCAGTAGACATTTTCAATGATCATAATACAAGGATTTCAAAAATTCGAGAATCTACAAGATATTTTAAAAAGCTCCAAGAAAATAAAATAGGAAAGAACGAAAATAGAATAAATATTCTTGAAAATACTAAAATTTCTGAAAATTTTCCACGAAATACCAAATCGTTTAAACTAAATTTGCCAAATTTAAGAAAAAGCCGACAATCTTTACGAAATTCAAAAAAGAGGATTGGAAATAATCAAAATGAAGTGCAACTAGAAAGAATAAGTAAAAACGAAACAAATAAGAGAAAACTTTCACGAAATCTTCGAGGGAAAAGAATAAGTAAAATGGAGAAAATGAAACAACAGGTATGTAGTGAAAGCGAAACAGATGAAAACCAGAAATTTCCTGCAATTAAAGAAGTGGAAAAACAAAAATCTTTTAAAATTAGAACACCTGAGCAAAATTCTATTTATACCGAAAGTGAAATAGAAAATCTTTCTGCCACTCCTGCTAAATCTTTCAAATATATCTTGGACCCGCTTTCTAAATCAACCAGAGCAAGTCTAAGATCGTACAAGAGAAAATGTAATGGGAATGCTATTAATTCGAATTGCTATACTTCGAAATACTCTATTCCTAGCCCTAAAAACGTTAAAAGAGAAAGCTCCAGTGATACATTAGACAATGAAACTTTTGCATCCAGTATTTATTCAGATTCAAGCCAAAAATTTTCCGATTGTTCAGAACTAAAAAGAAATTCCTTAAGCACAAAAAAGTTCCCTTTGCAAGACTCAAGTACGCCTGTAAAGAAAACAAAAAAAGTACTTTTGTGTGAAACAACAGACTATGAGGATGGAGATTCTGTAAATTCCGGTTTAAAGAAACCCCGAAAATCGAGTTTGGAAGTTAAAAGATCGCGAAGAAACTTAAGAACTACTGCCGCAAAAGTAAGAGAGATTGTTTGTAATAGCAATGAAAGTCTTAAACCGAGAATTAACGAAAAAGAAACAAATTTCCAAAACGTTGAAAACCCAAATAAAAATATAAAGCAAACTTTGGTTACCTCATATTTTGGGAGCAAAGATCATAAGCCTGGTAAAGAACATCATCCAAATGAAGAAAATGCGGCAAACTTTATAAATAAAAATCAACTTTTACAAACATCCGAAAATTTTAAAGATACTAAGCAAAATTCTAATAACTCCTTATCCAATCCTACTTCTTCTGAACAACTCAAATTCCAGGGATGTTTCGCCATTAAGGATACGTCTTCATCCTTAATCTCCGAATCTTTATCTCCTCTTTCGCCTAAAACCGAAGAAGAACATTTTGAATTCTATGAGCCCAAAGAGAAACTTAACAAATATCATATAAGCCATTTGATTAAACTCTACCAGGAGCATCCCCGCCTGTGGGATCAGGCACACGCAGATTTTTGCGAACCCAAGTTTTGCCGCAAGTCCTGGCAACAGATCACTGAACAATGGAATGAATTTTGCAAACGTAAATTCACCATTGCCGAGGTACGCATACGTATTTGTACTCTCTGCCAACGTTATGTGCAGGAAAGAGAACGCTTAGCTTTAGAGGGAGAACTAGATGACTACGCTAAATTTCCCTATTACGAGCAAATGAAATTTTTGGAACAGCAAAAATCCCTACAAAAGAGACGTGAACTTTATGAACAGCAAAATGAGAAAATATTGAAAATTTTTCAAACTTTTCCCGTTCTCTGGCAGGTCAGTTGTTATAAATCCCGACAAGCCAAAGAGAGAGCACAGGCTTTTGATAGCATTAGCAAGACCTTAAAATTATCTGGTTTCCACTTGTCCTCAGTGGGAGTCCAAAAACGAATACGTTCTTTAAGGAAATGTTATCGTTTGGAGAAAATCCGCTATTTGCATGCTCAGGTGGAACGAATTCCCTTTGATTCAGAATTTAGGCATTTTAAGAGAATGCAATTTATGGATAAGCATATCGACCCATTTGTATGTCGGATTTGTGGTAAAATTTTTGAAAATTTACAAGGTTTTCGGGAGCATTTGGAGACGGAAAATCATGGCAGTATATTGCAAGAGGAAAGCGAAAATGAATACGATCTGGATGAAAAAGAGAAAGGAGAGGAGGAGAAAATTGAAATTACAGCAGAAGAAAATGTTGAGATAACAAGCCCGTTTGCAAATTACTCAAAAACGATAGTTTTCTCTCCCATAAGCAGCCATAGTGAATGTTTTTTGGAATCGGAAAACAGCAAAAACATATTGGAGTCACAAGACCCTGAAGCCTTTGCTTGCTCTACTATTAGAAACCGAAGAGACCATTTTTCTGAATCAGAAAACTCTAGAGACATTTTACAAGCATATACAGCCATAACCTCAACACCAAATCAGTCTTTGTATACAGAAAATCTAGAAAAATCCTCTCCTATTATGCAGGAAGTTCTACAATTTCCTTCAAATACCCCACATGAACCGATAATAAATTCTTTGAATTTAAATGATCATCTCATAGAGGAGATTATGGAAAACTTTACCAATAATGATTGCTTTGGCAAACAATCATTGGATCAGTTTATTGATTCGGTCACAACTTGTGATAAACTATTTGCCGATAATTGTGTAATCGAGCAAACTTTATCTACTCATCTTTTCCATACGGAAAACTCATTTGTTGTGGAACATCCCGATATAGTAGCAGATGAAACTTGTAGTGAATTAAGTTCAAAGGAAAATATGTTATCTTTTTCTCCTGTTGTGATGCATATGGAAAATTCTTTTGTTGTGCAACATCCTGATATTGAAACGGAAGAAACTTTGAGTAATTTAAGTCCAAAAACACATGTGGGAACGTATGCCTCAAATGTTATGAATAGAGAAAACTATATTGTAGCGAAAGATGCAAAAATGATTGCCGATCCAGATATAATAGCAGATCCGATAGTTTCAGATCAATCGGTTTTTGTAATAGATTCTGAGAAATCATCAGATCCCGTTATAGTAACAGATTCGCATACAGTAACAGATTCTAGTTTAGAAAATCATTCTGTTATAGCAACACAACATTTTTCAGAAGTTCTAAGTCCACAGCCATCGAGTACAGAAAACATTTCTGTAAAGGAATTAGAAAATCAACTAAATGTTCAACGCGATGCAGAAAATCTTCCTTCTTTCGCTTTCCTGGTTGACAAAATTCAACATGATGACATTTCTCTTAAGCTAAACACAGAGTTTTCGGAAACTTCAAGCCCCACTCTTAATGAGTCCGACAATGAAAATTACTCTTCTGCCGAAATTTGCACAATACCCTTGTCCGATCATTTAATACACAAAATGATTGAACTATATCGTAAATATCCTCAGCTATGGAATCCCAATCATTTGGATTATAATTCACGCACTTTAAGGAGACAAGCCTGGTGCTTGCTTACAAAGGAATACAATTCAACGGTGGGTAAACAGTTATCCTGGCGTACCTTGCATCGCAAGCTGACGGACTATGCCAAGTACTATAAGAAATTGATAACGGAACAGAAGCACTATCAGCAACAGGAAAATAAATGGACTTTCTATGAGGATTTCAAGTTTATGGATGATGTGATAACCGTTAACGATGAACTGCAACGCAGTGTCCATCATCGTGATAATAATTTCAAAATTATAGCGATTTATAAGACTCTGCCTCAGCTATGGGATATAAAACAAGTTGACTATAATAAGCGTTCCATCAAGCAGCGTAATATTGAGTTAATGTGCAATTTATTGCAGGAGGAACATAATTTGCAATTGACTACTGAGCGTTTGAAAAATCGTTTGATTGAGTTAAGAACCCAATACAGAACAGCCAAAAAGCAACGCTTGATATGTGAGAAAAATCAGCAGAAATTTTCCTCTGCTGAATTTGAATTCTATGAGGCCCTTAACTTTCTCGATGATCACATAGATCCCTTTATCTGCGATAAATGCAAAATGGAATTTAAAAAACTTACCGATTTTAACCAACATCTGAAGAAAGAGCATTTTACAAAATCTCATCTAAGAAATCGCCCTGCAACTTTATCACCCCGAGATCCTGATGTGGAAAATATTTGTCATATATGCGGCATTAAGTTCACTACACGCAGTAATTTGCTTCATCATATTAAGCGCCACGAGGGCATACGCAATTACGAATGTACCATGTGTTCGAAGAGGTTTTATGCTTCTCATTCGCTCAAAGTGCACATAAGATCCCATACCAAGGAATGTCCTTATACCTGCGAAAAATGTGGCATGTCCTTTGTAAGTGCCAGTAAATTGAATCAACATGTTAAGCGTCATTTGAATAAGAAAGATTTTCCCTGTGATTTTTGTCCGAAGGCCTTTTTTACGGCCTTCGAAAAGCACCGCCATGAGAGAAGACATTTAAATATACGCGATAAAGCCTGCCCGATATGCGGTAAAACATTTGTGGCCGGTTCCTCGTATTATGCTCATCTGATGTTGCACAATGATAAAAAACGTTTTGAATGTGATAAATGCGAAATGAAATTTGCCCAGTACGCAGGGTTGTATAAGCACAAAAAAAGACATCATTCGTAA
Protein Sequence: MMNSALINDNYSNNLQLPGAQQQQTHLPDHLKCGEVYTWLCAGELYAVECKLCEDRPLCPLSEFPQHMEVWHTDWQDSTENFEGDTDYEEDSQDYSDHADNDHDLSFATEDSGLFEYEDQLQNERSTNPEPQDILEILEPFEQVLIEQQDNSLDSIQTSEDVNDYVNNDVDNEEQYSEDANEQVEAAAVAEAKQSQIENKHKEKQQHYDVNKTFKNSNKEQQVLKQEITENEREFCNVKEIEERDQELILNETDLIQNLQRDTKFNKNQKDFQNILNKNINFEKNLKTKKSNNENLKNVTENENTKEVIEKKLFELPRKFKKSSKITEGVEENLKKIHKIKRALNKIVKEIGNIQESNKIEATEIETSDLELNKNYKNLIKLKTLKTNKAKRIKNITKLGKNKSALRDLIRINKREKTQIKEIFSENETEYDKTTKASSEGERKSKEIKKESNGIEKGTKETKEETSENETDQSKILKEESESEKEFKENETEFNETKEKTSKIKWDAKEIEKEEITRTSAFETETSATESESFETVKKLKKGEGTNKSESCKNERQLKEHENETNAAKSNICDNKRQATGLKNITENVEEINIINDSSQTSENIPKTLKVNSKTFSEMPEYKKEKRINENETTKSKTNTNSFSEHETSENETETERKNKSKIGTSLDRNNVEKEITANKRNLSNNNIKRDTNKTVLKNERRGNEKETKENESVIEQNDMEQSENKVNKSENRTEQAKNETDTDKSVKAANKIKRKLKIQMKETDEKSLDKFGLELNEKVTGISENKTTYFRTCEINNKITECNKEQRTTTLKISKDQYENETESKGNKTLDRKSKENMNQHPENQGEMREIEASETNTNESVDIFNDHNTRISKIRESTRYFKKLQENKIGKNENRINILENTKISENFPRNTKSFKLNLPNLRKSRQSLRNSKKRIGNNQNEVQLERISKNETNKRKLSRNLRGKRISKMEKMKQQVCSESETDENQKFPAIKEVEKQKSFKIRTPEQNSIYTESEIENLSATPAKSFKYILDPLSKSTRASLRSYKRKCNGNAINSNCYTSKYSIPSPKNVKRESSSDTLDNETFASSIYSDSSQKFSDCSELKRNSLSTKKFPLQDSSTPVKKTKKVLLCETTDYEDGDSVNSGLKKPRKSSLEVKRSRRNLRTTAAKVREIVCNSNESLKPRINEKETNFQNVENPNKNIKQTLVTSYFGSKDHKPGKEHHPNEENAANFINKNQLLQTSENFKDTKQNSNNSLSNPTSSEQLKFQGCFAIKDTSSSLISESLSPLSPKTEEEHFEFYEPKEKLNKYHISHLIKLYQEHPRLWDQAHADFCEPKFCRKSWQQITEQWNEFCKRKFTIAEVRIRICTLCQRYVQERERLALEGELDDYAKFPYYEQMKFLEQQKSLQKRRELYEQQNEKILKIFQTFPVLWQVSCYKSRQAKERAQAFDSISKTLKLSGFHLSSVGVQKRIRSLRKCYRLEKIRYLHAQVERIPFDSEFRHFKRMQFMDKHIDPFVCRICGKIFENLQGFREHLETENHGSILQEESENEYDLDEKEKGEEEKIEITAEENVEITSPFANYSKTIVFSPISSHSECFLESENSKNILESQDPEAFACSTIRNRRDHFSESENSRDILQAYTAITSTPNQSLYTENLEKSSPIMQEVLQFPSNTPHEPIINSLNLNDHLIEEIMENFTNNDCFGKQSLDQFIDSVTTCDKLFADNCVIEQTLSTHLFHTENSFVVEHPDIVADETCSELSSKENMLSFSPVVMHMENSFVVQHPDIETEETLSNLSPKTHVGTYASNVMNRENYIVAKDAKMIADPDIIADPIVSDQSVFVIDSEKSSDPVIVTDSHTVTDSSLENHSVIATQHFSEVLSPQPSSTENISVKELENQLNVQRDAENLPSFAFLVDKIQHDDISLKLNTEFSETSSPTLNESDNENYSSAEICTIPLSDHLIHKMIELYRKYPQLWNPNHLDYNSRTLRRQAWCLLTKEYNSTVGKQLSWRTLHRKLTDYAKYYKKLITEQKHYQQQENKWTFYEDFKFMDDVITVNDELQRSVHHRDNNFKIIAIYKTLPQLWDIKQVDYNKRSIKQRNIELMCNLLQEEHNLQLTTERLKNRLIELRTQYRTAKKQRLICEKNQQKFSSAEFEFYEALNFLDDHIDPFICDKCKMEFKKLTDFNQHLKKEHFTKSHLRNRPATLSPRDPDVENICHICGIKFTTRSNLLHHIKRHEGIRNYECTMCSKRFYASHSLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHVKRHLNKKDFPCDFCPKAFFTAFEKHRHERRHLNIRDKACPICGKTFVAGSSYYAHLMLHNDKKRFECDKCEMKFAQYAGLYKHKKRHHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -