Basic Information

Insect: Pollenia amentaria
Gene Symbol: ham
Assembly: GCA_943735935.1
Location: CALSEV010000114.1:3868593-3870413[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-05 0.015 16.6 0.2 16 41 359 381 351 383 0.87

2 3 7.8e-05 0.049 14.9 1.9 17 44 388 412 382 412 0.88

3 3 0.22 1.4e+02 3.8 0.6 18 41 418 438 413 440 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-05	0.015	16.6	0.2	16	41	359	381	351	383	0.87
2	3	7.8e-05	0.049	14.9	1.9	17	44	388	412	382	412	0.88
3	3	0.22	1.4e+02	3.8	0.6	18	41	418	438	413	440	0.86

Sequence Information

Coding Sequence: ATGAGAGAAAAACATCATTCTCCTAGAAAAATGCTTCCCAGCCCCAAACAAGGGTCAGTGTACCCGATTTTAGGCTCAGTGCCTTACAATTTAAACTCGAATGTACCTTATGATTTGACATCGCCTTCAAGGGCATCTACCACCGCTTTGACATCTGCGTTAACAGCTTTGTATCAAACACAAAAGGAACTTAAACACAAGGAACGAAGGCGTGGCACTGTAGATCAGCCTTTGGATTTACGCTTGGCCCACAAAAAGCAGGATGTTGGTACAGGCATTAATGAAGATGACGACCAAAATTGCGATACACAAATGATGGAAGATGAAAATAGTAATTTAGTTATGATAGCTTCATCCCACAAACAATCATCTACGACTTTAGAAAAATCTTGTCAAAGTGCTGAATGCAATAACAACAATATTATCAATAACCATTTAGCCAGACTCCAGGCGGAACAACTGGTAAAGTCAGAGGTTCATTTACTAAATGAAATGAACAATAATGATTCGAGCTTATTGCAACAAAATCAAAATCACTCGGTGCGGAATCAATTTGACAATTTGAATAGTAAGAAAATCCTAAGAGTATTGAGGGATCAGGCTAAGTCGTTACCAAACAATTTGGAACAATTGCCTTTTCCAGTTACAGCATTACATCCCACTCTCTTAGAGACGATAGCCAAAGCCATGCCACCCCTACCGTACAGAAATCTGTTTTTTATGCCACGGCCGAATCAACCTGGAAATTCGTCAAATTTTTCATTTTTCACAGCACCTCTTGGCAAAGAGACAAAGAAAAGTTCCAGTACAGTCTCAGCGACTACAACCACACCTCCTATAGCAAATACAGAGTCTACGCTTAATGACATGAACTTTGAGCCGTCACAAACTCGCTGTTCTTTAACAGAAAATCTTACCAACTCCCTGCTTATCAATCAAAATAGGCCAGCCACTCCTGCTGCTGCTGCTAGTACTCCTAACCAACCGTCATCGTACCGTCATAAACGAAACACAACCGTTAACGCTCGTACAAACACTCAAGTCTCTGGTAACCTGTCCTACAAATCTAAAGATCGGTACACTTGTAAATTTTGTGGTAAAGTATTTCCTCGCTCTGCTAACCTAACACGTCATTTGAGAACCCACACGGGTGAACAGCCGTACAAATGTAAATACTGTGAACGTTCCTTTAGTATATCGTCAAACCTGCAACGACATGTCCGCAATATACACAACAAGGAAAGACCTTTCAAATGTGAAATATGCGAACGATGTTTTGGCCAGCAAACTAATCTGGACAGACATTTAAAGAAACATGAAGCTGATGCTGCCTCTATGGGTTTGGGATTAAACGAACGCTTAAGAGGTGGATTACGCCGTTTCTGCGAAAATCCTGCCGAAGAATCTTATTTTGAGGAAATACGCTCTTTTATGGGTAAAGTTACCCAATTGCCCTTAAATACTACCGCCAGTTCAGCTAAACATGCCATTGCCGTTCCAGAAAGCTCTACAACGCCGCACTCGGAACCTCAGTCTCCTGGTAGAAGTTCGTCGTACGCCCCTTCTGATCCTGATTCAGCAGCAAGCGGCCTAAGGATTGTTACCCACGATGATCAAAGTAATCACAGTAATCAATCCAATGAACATCACAACTACCCACAACGTCAACAACATCATGCTGGTCAAACCGATAAATTATCGCTGTCAACATCTTCCTCACCACCATCTTCCACCGAAGACAACGAGGCATCAACTCCTACCACAGCAAACACACTAACAGCATACGAATCATCCGCTAGAGGGTGTCCTACAACAACCTAA
Protein Sequence: MREKHHSPRKMLPSPKQGSVYPILGSVPYNLNSNVPYDLTSPSRASTTALTSALTALYQTQKELKHKERRRGTVDQPLDLRLAHKKQDVGTGINEDDDQNCDTQMMEDENSNLVMIASSHKQSSTTLEKSCQSAECNNNNIINNHLARLQAEQLVKSEVHLLNEMNNNDSSLLQQNQNHSVRNQFDNLNSKKILRVLRDQAKSLPNNLEQLPFPVTALHPTLLETIAKAMPPLPYRNLFFMPRPNQPGNSSNFSFFTAPLGKETKKSSSTVSATTTTPPIANTESTLNDMNFEPSQTRCSLTENLTNSLLINQNRPATPAAAASTPNQPSSYRHKRNTTVNARTNTQVSGNLSYKSKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHEADAASMGLGLNERLRGGLRRFCENPAEESYFEEIRSFMGKVTQLPLNTTASSAKHAIAVPESSTTPHSEPQSPGRSSSYAPSDPDSAASGLRIVTHDDQSNHSNQSNEHHNYPQRQQHHAGQTDKLSLSTSSSPPSSTEDNEASTPTTANTLTAYESSARGCPTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045466;
90% Identity: iTF_00045466;
80% Identity: iTF_01236155;