Pame022988.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000381.1:3082721-3086137[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.068 3e+03 -0.8 2.8 57 101 66 114 33 133 0.43 2 4 0.0068 3e+02 2.4 2.9 65 123 220 285 196 306 0.51 3 4 0.63 2.8e+04 -4.0 0.7 80 96 336 352 312 366 0.39 4 4 7.8e-95 3.4e-90 303.0 6.9 2 218 496 698 495 698 0.92
Sequence Information
- Coding Sequence
- ATGTTTACACCTATCAAAAACTTTATAACATATATACAAAAGAATGCAAGTGGTAATTCAATATTTGGTGGAAATAGTGGAAACGAAGAATCAGCAAGAATGGAAACAGAAAATATAGAGCCAGTAACAGAAAACGTAGATATGAAAACGGGAAGTAATATTCCGAAAGAAATTAAAAAAAATGAAAATAGTGTTACAAATAAAGAAGAAGCCGAAGAAAAAAAATGCGAAGAATCCCATGATTCTAGTACAGATATAAAAGACCCTGAAACAAAAACTACCAATTTAATAACAACGTCAACAGTATCCACAGAAAATTCCTGTGATCTTGAAGATGAAGACATAGAGGCACAAATCGAAAGAAGTATTATGTTGAAAAAACCAGTGAAAGCTTCAGCCACAAGTGGCAGTGAAATTCTAGAAGTGAAAAAATTTGTAAACGCTAGTAGCGGTGTTGTTATTAGTCATGATTTTAATCGTAACCAGGCCTTAAGCCCAATAGAAGATGAATTAGATGATTTTAGGAATGATCCAATGGAAGTATTGTGTACGATTTCATCACCTTGTTCTAATCAACAAGCTGATGAGTTTTGTTCGGTGGGAAGTGTAGAAGAAGCTCTCGAAAAAGATATGTTAACAAAAGGTGATATACAAACCAAGGAGAAAGAAGAATTTGATAAATGTAAAACGCAGGACGAACAAATAATAGATTCAGATGTTGAAGTAGACGAAAACAAAGATGTTGAAACCGAAAACGAACAAAATGATGTCATCGATATTGATGATGATTATGAAGACGATGAGGATGAAGAAGAGCCATTCTTAGATTTGCATAATTTTAAAAACAGCAATGTAATTGTTTTAGATGAAGTGGATCTCAATGCTTCTACGACTTCTATCGATACAAACAATACCGCGGACGATCCTTTATCTATAGCCAGTGAAGAGCAAGAAGCTTTTATTGCCGATAAAGCTGCTGCTTTAGAGAAATTGAATTTACTCAATAATTCACAGAACTCACAAGATGATGATACCAGAACAACCACCGAAGATGATTTACAGTGGCTTAAAACTGATCTAGATGATAATCAACCATCTTGCAGTGGTAAAGAGTTACTCAAAGGTAATGCATCGGAAGTTACACCTGAAAAGGAGGAACGTAATGGCGAGGGTTCAGATTCTGGTTTAGGTAGTGAAACCTCCGCTTTACACTCCACCACCACAAGTATTACTGATACTAGCCAATTGAACATAACAACAGCGACACCCATTCAGACTCCTAATCAGATAAAAATAAAAGAAAAGGAAAACACAAATGTGCTAGAATTAACAAAATCACTACCAAAGGACCTTCTTAAACCATACAGATCAAATTTAAAACGACGTTTGGAAGTTGATGATGTAGTAGAAGGTTTTGGTACTTTATCGTCTACGATTTCTTCAGTTTGTGATCATAGTTCTCTACTTGTTAGTATACAAAAGAAACCAAAGCGTTCAATTAATTTCGATACGGTACAGGTCTATTATTTTCCGCGACAACAGGGCTTTAGTTGTATACCATCTGCGGGTGGTTGTACTTTGGGCATGGGAGCCAGACACGTGGCTTTAAAAACTTTAACATTAGCTGAACATGCAGCTGAGCTGCGAAGAGCTCATCGTATGCAGTTACAGGAAATAAGTCCTAGAGGAAGCTCAAGTGATGACAGCGAGGAATCCGAGGAAGACTATTTAAGTGAGGGTAGTGGCTCTGATTTAGATGGTGAAACCAATGGTTTTCTACAGCCAGTGTCACCCAAACAGCGGAGAGCTTTGCTGAAGGCTGCTGGTATACGTAAAATAGATCCCAGTGAAAAGGCTGAATGCCGTAATATACGCAATAGTCGAGAGGTTTGTGGTTGTTCTTGTCGCGATTTTTGTGATCCTGAGACATGTGCTTGTTCTCAATCTGGCATTAAATGTCAAGTTGATCGTGATATGTTTCCTTGTGGCTGCTCTCGTGATGCCTGTGGCAATACAATTGGACGTGTGGAATTTAATCCGACTCGTGTTCGCACACATTACATACACACTCTAATGCGTTTGGAAATGGAGAATCGTCAACAACAAAATCCTTATTCTTCTGCTGTTGCCTCACCTATGCAACCAACTCCTTCCTCGTTTTATCAAACCCATTTGCAACCGCAATCGAACTATAGTTCGGGTTATGCATCACCGGCTTACAACACTGCCTCCGAACTCCATCCACAAACGGCTAGCAATCCATACTATCACTCGCAATCACCTTCCACATCCAACGGTCTGTATGGACAACAAACTTCATTAGAAATGACACACAATGGTAGTGCAAATAACACGACATCTACATCGCAGTATGGTATTGATAGTTTGGATACAGGACTTTTTAGTGGAACCACTATAGCTACACCATCTTATGGGGAACTAATGCCAGTGCCAACGTATCATTATGGAAATGTGCAAACACAAGCATCTCCCTACAATTCTTACCACAATACCCCTTACATTAATAGAAACAGTAACACCACATCCCTTATTACATCTAACACTTATAGCTCATGTGCTGTACCTTCTATACCACCCTATGGTACAGCCACAACAACAGAAGCTTCGGGAGTCTATCATAGTGTAAGTAGTTTGACAAGCTTAGAGACTACAACAGCTCCCTCTTGTATTGTTAATGGTACGACATCATTGGAAAATGATCATAGTGCAAGTTTTATAAGTCTTTCCACCCCTTTAGCCAGTTCCTCAAGACTATCGCAAATAAATGATTTACTACAACATAATCGTAATGCAACAACAGCCTTAGTGGCTATTTCACAAAGCATAGGAGCCACAGATAAGAACGTAACATCAACAGCGTGTACAACACAGGTTAATGATAGTGTTAGCAACTTGCCAGTAACAAGCTCATCGAATAATACACCAGCTATAGATAATGCCCACAATAGTTGCATGTCTTATAAAGAATTAGCGCAAACTTTAGACCCGGCGCATTTAGTGGCAGTTATTGAACATGACAATAACAGTGGACCAGCTAAACCAATAACACCAACACTACCATTAGTAGCAGAAACAGAAAATTTGGCCAAAAACGTAGATAAAACATCAACATCTTCATTATTAAATACTGAATTTTTAACAAAAAGTTCTTCATTGTGTATTGATGACAAAGATATCACCACAGTGGCGGTAAGCGCAACTATAAAACCTACATCAATAGAAGTGACAGCTGGCAACTAA
- Protein Sequence
- MFTPIKNFITYIQKNASGNSIFGGNSGNEESARMETENIEPVTENVDMKTGSNIPKEIKKNENSVTNKEEAEEKKCEESHDSSTDIKDPETKTTNLITTSTVSTENSCDLEDEDIEAQIERSIMLKKPVKASATSGSEILEVKKFVNASSGVVISHDFNRNQALSPIEDELDDFRNDPMEVLCTISSPCSNQQADEFCSVGSVEEALEKDMLTKGDIQTKEKEEFDKCKTQDEQIIDSDVEVDENKDVETENEQNDVIDIDDDYEDDEDEEEPFLDLHNFKNSNVIVLDEVDLNASTTSIDTNNTADDPLSIASEEQEAFIADKAAALEKLNLLNNSQNSQDDDTRTTTEDDLQWLKTDLDDNQPSCSGKELLKGNASEVTPEKEERNGEGSDSGLGSETSALHSTTTSITDTSQLNITTATPIQTPNQIKIKEKENTNVLELTKSLPKDLLKPYRSNLKRRLEVDDVVEGFGTLSSTISSVCDHSSLLVSIQKKPKRSINFDTVQVYYFPRQQGFSCIPSAGGCTLGMGARHVALKTLTLAEHAAELRRAHRMQLQEISPRGSSSDDSEESEEDYLSEGSGSDLDGETNGFLQPVSPKQRRALLKAAGIRKIDPSEKAECRNIRNSREVCGCSCRDFCDPETCACSQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPTRVRTHYIHTLMRLEMENRQQQNPYSSAVASPMQPTPSSFYQTHLQPQSNYSSGYASPAYNTASELHPQTASNPYYHSQSPSTSNGLYGQQTSLEMTHNGSANNTTSTSQYGIDSLDTGLFSGTTIATPSYGELMPVPTYHYGNVQTQASPYNSYHNTPYINRNSNTTSLITSNTYSSCAVPSIPPYGTATTTEASGVYHSVSSLTSLETTTAPSCIVNGTTSLENDHSASFISLSTPLASSSRLSQINDLLQHNRNATTALVAISQSIGATDKNVTSTACTTQVNDSVSNLPVTSSSNNTPAIDNAHNSCMSYKELAQTLDPAHLVAVIEHDNNSGPAKPITPTLPLVAETENLAKNVDKTSTSSLLNTEFLTKSSSLCIDDKDITTVAVSATIKPTSIEVTAGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01237648;
- 90% Identity
- iTF_01236667;
- 80% Identity
- -