Pame006490.3
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- ct
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000090.1:1629535-1698086[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-26 1.4e-22 80.8 0.0 3 72 948 1018 946 1023 0.94 2 3 1.2e-31 1.3e-27 96.9 0.0 3 77 1374 1449 1372 1451 0.96 3 3 1.2e-30 1.3e-26 93.6 0.0 3 77 1628 1703 1626 1705 0.96
Sequence Information
- Coding Sequence
- ATGTGTAATAAATTATGCCCAGTGTTACCTAGAGCTACCTTGGCTGAAAAGGAAGTCAACACTCTGAAAGAACAGCTTTCCACCAATACACCAAATACAGATAGCGATAATAACGGCGACTTGCCTTTGTCCACCAGCACAGCTAACAACACACTTGACTCAAATACAGAAGCTTTGAACGCTTTGTCCACAGAGATCCCACCAAATAAAATTTTATCATCCACATTCAATAACAACAATACCAAACTATTGAATAGTGTGGCTGCTGCTATAACTCTACACCAAAACGGTGGTAATTTATTGGCAACAACACCCTCCCCCTCGCCACCGCTCTCAGACTCGGGTAATCACGTGACAGGCTCCCAGGAGGATCCAAGCGAAGAACAACAACAGCAACAACAACTTAACGGTTGTTTAAATCCCAAACTGTTTTTCAATCACGCCCAACAAGTAATGATGATGGAGGCTGCCGCAGCTGCAGCGGCTGCCGCGGCGGCGGCTGCTGCAGTACAACAGCAACAATCGCCCATGCATTCGCCACAACCTGCAACAAAGCAACAGCAGCAAGAGGAAAAAGATAAACCCACCAATACACAGGAATTTAATGAAAACTTAGATTCCAAATTATTAAGTGATACTCAAACACAGGATAATAACAACCTTGCCACACAACAAAAACACTCGGAGGACTCGGCATCAGAGAAGAATCCATCTGCTGCTGTTGCTGCCTCTGATTGTAGTACTAATAATAATAACAATAATAATAACATCAATAGTTTTAATAGTGATAGTAACAACAAAAAGCGTCTAAATTCTCTGGTAACAAATCAAAATTGTACGGAAACAGTTACAGAAGATGATAAAACGCTTAATGCTAAGGACGATAATCAGGAGGAGGAGGAAGAAGAGGAACAACATATGGACACCACGGAAGAATTAAGAGGGAAATTATTAGATAATAATAACTATTCAAATACAGAAATGAAAAACAATCATATGGAATTATTAGCTGCCAAAGATAAAGAGATTAAAGCCTTATTCGAAGAAGTTAAACGTTTAAGAAGCGTCGAACAAACTCATTTAATACAAATCCATCGTTTGGAAGAACATTTGGAAGCCAAACGCCAGCATATAATGCGTTTGGAATCTAAACTGGATAAACAACAAATTAATGAAGCTTTACAGGAATCCCAGCAGCAAAATAAACTTTCGCAAGATTTGCAGGATCATGAAAAGGATTGTGAAATGTTAGAGGTCAATGAAAGCGCCAATAGATCGGAGGAAGAGAATGATGAGGAAAATGAAGAACAAGAGATTGTTAAAGAAAGAAACTGTGATTTAACGCCTCAACTTAAGGAGAAACATCAAGAGGAAGAGGAGGATGATGGGGAGGAAGAGAAGGAAAATAATCAAGATTCCTCTCCTATGGAAGAGTGTACAAATACAAAGGATTCAATGAAAGATTTACAGATTAAAAAGGAAACACATTCTAGATCACCTTTATCATTAGACTCGATTAGCCAACAAAATGCCATTGCTGCTGCTGCAGCCGCCGCTGCTGCCTGCAATAATGATCCGAACAAATTCCAAGAACTATTAATGGAACGTACCAAAGCTTTGGTAGCCGCTGAAGCTTTAAAGAATACCGAAGAATCAGATCAGAATAACGAAGAGTCACAATGTTTAGATACCGACACAAATACAAATGTTGCTAGTTCAAGTGTTGCTAAAGCCCAAGATGTTGAGGAACAAGTTGAAGCTTCAAAAGTGCCAAAAATAGAAATACTGGATGATGATGAAGAAGAACAGGAAGCTAAACTACTTAAAGAAAATGTTAATGAAACAGATTTATGCTCAAGCATAGATTTGGAAAATTTGGATTCCAATACCCCCCATGCATTAACAGAAAAGCCTTTAGAGGATGATGAAGACTCGGCAACATTTAAACAAAATGTTGAACGTTTTGGCACTTTGTTAGGTGAAGAATTGGTAAACTCTTATtggcgtagaggttttgatcaaagcaaatctttgtacggtcaacaaacccaacatcagcaacatcatctgcaacaacagcagcaacagcaacaacgttctatgcaacaccagcaacatcatcatcagcatttaatgttgcaacaggccaacgtccaacatcatcaccagccacaccaacaaccaatgcaacaacagcaacaccatcttcatcaacagcctaatcaaACGCATTTACCACAACCACCCTGTGGTCCTTCGACCACCACCTTGCTTAGTCAATTAGTTAATTCTACTTTTTCTACTCCCAACTCTAATCCAACAACTCAATCCTCTTTACGTTCTTCAGATGGGTTTACACACTCGCAAACGGCCTCACATCATCATCATCCACATGCCCACCACCAACACCACCTGCACCATCAACTGCCCGCCCACTTGGCTCCCGATCATCATGATAAGTCTTCACTCAACCACCATGATTCTTCGGCCTCCAGTGCCAGCACCCCCAATTTACAGGAACAACGCAATAATGAGGATCTTCATAGTTTGTCTTTGAATGGTTCTCTTAAGAATTTAGAGGATAATAACAATAGTTTATGCGCTACACCCACCAGTCATCATCTGGGTGCGGGTCATCCCACTCACTTGCCTCATGGCTTTTTGCCAGGTTTACCATTCCAATTTCAAGAACGAGGTCATTTCCGTTTTGCCGATGATTTGCAATTGCCTCCTGGCACTTCTATGGCAGGCAGATTGGGTGAATCTTTAATACCCAAAGGTGATCCCATGGAGGCTAAGTTGCAAGAAATGTTACGTTATAATATGGATAAGTACGCCAATCAGGCCTTGGATACTTTGCACATTTCAAGACGTGTTAGAGAACTTTTATCTGTGCATAATATAGGCCAACGTATATTTGCCAAGTATATTTTGGGTTTGTCGCAAGGCACCGTCTCGGAGTTGCTATCGAAGCCGAAACCCTGGGACAAGTTAACGGAAAAGGGCCGTGACAGTTATCGCAAAATGCATGCCTGGTCTTGTGATGATAATGCCGTTATGCTACTCAAATCTTTGATACCTAAGAAAGATTCTAGTTTACCTCCTTATGGCAGTGGTGGTCGTGATGATTCAATGTCTGATGAACGTTTAGCTCACATATTAAATGAGGCTTCATCGTTAATGAAATCATCAGGTGGATCTTCAATGCATGCACAACATGAACATCAAAGAAGATCTTCTACCATACCCGAAGACTCACGCAGCAATGATGATTCAAAATCACCTCACCAGCCCTGCTCGTCGCCGTTCTATAAAGAGCATCATAGCAAATCACAGGGTGAGACTGTAATGCCTGGTCAAGGGCATATGCGTCCAGATGAAATGAATCCTGAGAAAATGGCTAGATTATATCAAGAGTTAATGGCTAGGGCTCCTCGTGAAGCGTTTCCCGGATTTTTGCTTTCTCCTTTTTTCAGTGGTGGTCTTCCTTCAGCAGCTGGCATGGCGGGCAACGCCTTTCCTGGTTTGGCAGCCGATGAAAATATGCGCTTAGCTTTTGAACGTGAAATGTCTAAATTTCAACAGCAGCAACATGCTGCACAACCTCCAAACTTTGCCAACTTCTCTAGTCTCATGGCTTTGCAGCAGCAAATGTTGAATGGTGCCCAGGATCTAAGTTTGGCTACAGATGATAAGCCCAAGGATAATAATAAAGTGAATGGTCAGCGCTCATCATTTGAGGGTTCTCAGAACTCCTTAAGCAACCACGGCCAAAGCACACCCAATGCCAAAGATTCTAACTCCTCTGAAGTGGAAAGACTTTATCCGGGCTTGGTGAAATCGGAACAGGGCAACAAAACTCCAGCTCCGTTGGCTTCAAGTAATGCTTCAACCGCCAATACTAACTCGTCTGCTCCCAGTCCTCTAAGCAATTCCATACTCCCGCCTGCTATGACACCCAATGAGGAATTCTCTGCCGCCGCCAGTCCTTTGCAGCGAATGGCCTCTATAACCAACTCATTAATTACCCAGCCTCCAGTTCCACCTCACCACAATACCCCCCAGAGACCCACGAAAGCCGTCTTGCCTCCTATTACCCAACAGCAATTCGACATGTTTAACAATCTTAACACCGAAGACATAGTGCGTCGTGTTAAAGAAGCTTTATCACAGTATTCCATATCTCAGCGTTTATTTGGTGAATCAGTATTGGGTTTATCCCAAGGTTCTGTTTCGGACCTCCTAGCAAGACCCAAACCCTGGCATATGCTTACCCAAAAGGGCCGGGAACCTTTTATACGTATGAAAATGTTTCTGGAAGATGAAAATGCTGTACACAAATTGGTAGCTTCCCAATATAAAATTGCTCCCGAGAAGTTGATGAGAACTGGTAATTACAGTGGTTCTCCCCAAATACCCCAGGGTTTGGCCAACAAAATGCAAGCCTCTTTGCCCATGCAGAAAATGATGAGCGAACTGAAATTGCAAGAACCAGCTCATATCATGCAACAAATGCAGGCAGCAGCCGTAATGTCGGCAGCTATGCAACAGCACCAGCAACAACAGGCAGCCGCCGTACAACAAAGTCAGCAACAAGCTGCACAAGCGGCAGTACAGGCCGCTCAAGCTGCTGCCGCAGCCCAGGCAGCTCAACAGCATCATCAAAATATGTTACTAACATCACCGGGTCTGCCTCCGCAGCATACTATTGCCCTGCCGGCAGCCAACTCTCAGCCTACATCAGGCAATAGCACACCTGCGGGTCCCACACCCGACAAGAAACCCATGATGATGCCCATACACTCACCCCACCAAGGCAATGCCATGCGAAATATGCACCAGCATATGTCACCCACCGTCTATGAAATGGCTGCTTTAACCCAGGATTTGGACACTCAGGTTATCACTACCAAAATCAAGGAGGCCTTGTTAACCAACAACATAGGCCAAAAGATATTTGGGGAAGCTGTTTTGGGTTTGTCTCAAGGTTCGGTATCGGAATTATTAAGCAAGCCAAAACCCTGGCATATGTTATCCATTAAGGGTCGTGAGCCCTTCATACGCATGCAATTGTGGCTGTCGGATGCCAATAATGTAGAACGTTTGCAGGTCTTAAAAAATGAAAGGCGAGAGGCCTCCAAACGGCGCCGCTCTACGGGAACCAATCAACAAGACAACAGCTCTGATACTTCCAGTAATGACACCAATGATTTTTATACCAGCAGTCCAGGACCCGGTTCAGTAGGCAGTTCAGGAGCTCCACCAAATAAAAAACAACGAGTCTTATTCTCCGAGGAACAAAAAGAGGCCTTAAGACTAGCCTTTGCCTTAGATCCTTATCCCAATGTGGGCACTATTGAGTTCTTGGCCAATGAATTGGGTTTGGCTACACGCACCATAACCAATTGGTTTCACAATCACCGCATGCGTTTGAAGCAACAAGTGCCTCATGGTCCTCCCGGCCAAGAGACCAATATACCCACTAGAGAAAACACCAATTCCACACCCTTTGATCCCGTCCAGTTCCGAATTTTATTACAGCAAAGATTGCTGGAATTGCACAAGGAACGCATGGGTCTAACCGGCAATACCCCCTTGCCCTATCCACCCTATTTCGCAGCGGCCGCTTTATTAGGACGGTCCTTGGCAGGCATGCCAGGTACTAATCCCCAAAATGCCTTGCCCACCAATGAGGCTGAATTAAGGGCTCTCAACCAAGCCTTTAGGGAACAAATGTCTGGTTTGGATTTGTCCATGAGTTCATTAAAACGCGAACGCACCGATGACTTTGAAGATGATTTGGACGAGAGCCATATGTCGGAAAACGAAAACGATGATTTGGATGATGAGGACAAAACAAGCGAGTATAGAAATCCTGCTTTATCCAGCATGAATGCCCAGCATTTTTTAAATAACATGCGATCGAACAGAAGAAAACCTGCCGCTCCACAATGGGTTAATCCGGCCGTGCCAAATGCCAATGAAGCTGAACGTATAATCAATGGTGTATGCGTAATGCAAGGGGAAGGCGAAGGCCAACAACCATCCATAATTGAAGAAGATCTGCATAAATCTTTAGACAATGACGACAATGACATGATGGAGTCTGCTCCACAATCGGTCATGGAACCCGAAGTGGTCATTAAACAAGAAAAAGAAGACTGTGAAAGTGATAGTGAGAAAACTAACACTGAGGACAATGCCCATATGAGTGAGGAAAGAATTAAGGTGGTTCAAGAAGACAAGCTAAGAATGGTGCGTGTCAATCGTTTAAGCAATGAAGATGAAACAATAGCAGCTGGAAATAATGCAGCAACAACAGCGTGGAATTATTAA
- Protein Sequence
- MCNKLCPVLPRATLAEKEVNTLKEQLSTNTPNTDSDNNGDLPLSTSTANNTLDSNTEALNALSTEIPPNKILSSTFNNNNTKLLNSVAAAITLHQNGGNLLATTPSPSPPLSDSGNHVTGSQEDPSEEQQQQQQLNGCLNPKLFFNHAQQVMMMEAAAAAAAAAAAAAAVQQQQSPMHSPQPATKQQQQEEKDKPTNTQEFNENLDSKLLSDTQTQDNNNLATQQKHSEDSASEKNPSAAVAASDCSTNNNNNNNNINSFNSDSNNKKRLNSLVTNQNCTETVTEDDKTLNAKDDNQEEEEEEEQHMDTTEELRGKLLDNNNYSNTEMKNNHMELLAAKDKEIKALFEEVKRLRSVEQTHLIQIHRLEEHLEAKRQHIMRLESKLDKQQINEALQESQQQNKLSQDLQDHEKDCEMLEVNESANRSEEENDEENEEQEIVKERNCDLTPQLKEKHQEEEEDDGEEEKENNQDSSPMEECTNTKDSMKDLQIKKETHSRSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNTEESDQNNEESQCLDTDTNTNVASSSVAKAQDVEEQVEASKVPKIEILDDDEEEQEAKLLKENVNETDLCSSIDLENLDSNTPHALTEKPLEDDEDSATFKQNVERFGTLLGEELVNSYWRRGFDQSKSLYGQQTQHQQHHLQQQQQQQQRSMQHQQHHHQHLMLQQANVQHHHQPHQQPMQQQQHHLHQQPNQTHLPQPPCGPSTTTLLSQLVNSTFSTPNSNPTTQSSLRSSDGFTHSQTASHHHHPHAHHQHHLHHQLPAHLAPDHHDKSSLNHHDSSASSASTPNLQEQRNNEDLHSLSLNGSLKNLEDNNNSLCATPTSHHLGAGHPTHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSSLPPYGSGGRDDSMSDERLAHILNEASSLMKSSGGSSMHAQHEHQRRSSTIPEDSRSNDDSKSPHQPCSSPFYKEHHSKSQGETVMPGQGHMRPDEMNPEKMARLYQELMARAPREAFPGFLLSPFFSGGLPSAAGMAGNAFPGLAADENMRLAFEREMSKFQQQQHAAQPPNFANFSSLMALQQQMLNGAQDLSLATDDKPKDNNKVNGQRSSFEGSQNSLSNHGQSTPNAKDSNSSEVERLYPGLVKSEQGNKTPAPLASSNASTANTNSSAPSPLSNSILPPAMTPNEEFSAAASPLQRMASITNSLITQPPVPPHHNTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLANKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQAAAVQQSQQQAAQAAVQAAQAAAAAQAAQQHHQNMLLTSPGLPPQHTIALPAANSQPTSGNSTPAGPTPDKKPMMMPIHSPHQGNAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGTNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLTGNTPLPYPPYFAAAALLGRSLAGMPGTNPQNALPTNEAELRALNQAFREQMSGLDLSMSSLKRERTDDFEDDLDESHMSENENDDLDDEDKTSEYRNPALSSMNAQHFLNNMRSNRRKPAAPQWVNPAVPNANEAERIINGVCVMQGEGEGQQPSIIEEDLHKSLDNDDNDMMESAPQSVMEPEVVIKQEKEDCESDSEKTNTEDNAHMSEERIKVVQEDKLRMVRVNRLSNEDETIAAGNNAATTAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109239;
- 90% Identity
- iTF_01235609; iTF_01237442; iTF_01237547; iTF_01236548; iTF_01236446;
- 80% Identity
- iTF_01235609;