Pame006963.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- kn
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000096.1:2607427-2627061[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-71 8.4e-67 227.0 0.1 43 161 31 149 17 154 0.96
Sequence Information
- Coding Sequence
- ATGTTCGGCTTATTTTCGAACACTGCTCGAGATATATTCTGGCCACTGCATCATATGCAATCTGTATACCAAATTGAACAAAAAATGAAAAACTTGGGCATCGGTAGAGCTCATTTTGAAAAACAACCACCCAGCAATTTGAGAAAATCCAACTTTTTCCATTTCGTAATTGCTCTCTACGATCGTGCCGGCCAACCCATTGAAATCGAACGAACTGCATTTATTGGATTTATTGAAAAAGACTCTGAAGCGGATACAACGAAAACCAATAATGGCATTCAATATCGGCTGCAATTACTCTATGCTAATGGTGCTCGACAAGAACAGGATATTTTCGTAAGACTTATAGACTCCGTAACGAAACAGGCAATTATCTATGAAGGACAAGATAAAAATCCTGAAATGTGCCGTGTCCTATTGACGCATGAAGTTATGTGCAGTGAAGGAATACAAGAAAATCTATCATGA
- Protein Sequence
- MFGLFSNTARDIFWPLHHMQSVYQIEQKMKNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSEADTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSEGIQENLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -