Pame007815.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- grh
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000109.1:736200-755244[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 1.6e+04 -3.8 0.0 103 106 70 73 45 89 0.55 2 2 2.7e-11 2.9e-07 31.3 0.0 24 74 407 456 393 475 0.80
Sequence Information
- Coding Sequence
- ATGCTGCATTTCGCAATTATTATTGTTGTTGGACTTAGTGCTCCCAGTGCAAAGCTGAATGGTCAAACCACACCTCTTGATGTGTCGAGCCTATCGCAAAACGAGATACAAGGCTTGTTGCTTGGCTCACACCcatcggcaacttcggctgctgtggcggctgctgctgcaaatgtcaccacaacagcaactctggcacaacagcagcaacaacagcagcagcagcagcaATCAACCATCGTGAGTGCAACTGGTGGGGGCACAGGTACAGTGGTCATAACAGCTGATCAACATCGCCAGCAGGCGGCCACGACTACGATAAACATTAAACGGGAACCGGAAGATTTGCGTAAAGATCCTAAAAATGGTACCGCTAGTAATGGCTCCACAGCCAGTAGCGGACAAAAGGTTATTGTATTACAACAATCACCATCGCCCACACAAATACACATTAAAGAACCGCCTCTTAGTCCTGGAAGTCCAACAAATCATACAGAAGCCATGTACGCTGCCGGCGGCGGCACTCAAATTTATCTGCAGGGACCTCATCAGAACTCAGCAGCTGGACCTGGCAGCAATGTGAATACACAAACACCCAGCCCTGGTCCATACATTGGAGCCGATGGTTATGGCATGTACACAACTAGTCGCTTGACAACAGCTCCAACCACCACATTCATTTCGGAACCCTACTATCGTGAATACTTTTCAACAACAGATGGCCAAGGTTACGCACCCACCCGCACAATATACGGCGACAGTGAAGGCCCTCAACCGGGCACAACATATGAAGGACGTTTCACCACTACGACCACCAACAGTGGTATACCACCTCCCCACCCATCGGCGAACATCTCAAAGAACAATGGCGGCACTCCCATCTATGCCAAGACAGTAACAGCAGCTGGCCTAACAGTCGATTTACCTAGTCCGGATTCCGGCATAGGAGCTGACGCTATAACGCCCCGAGATCAAAACAATATACAACAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGCTCATTACTGGATAATAATGGTGGTATACCCGTTTCCGTTAACAGCATACAACGTGGAGCTGTCAGCGTCCATGGAGGTCAAAATAGTCCCACAACTTCGTTAGGTGGCACCAGTGCTAATGGGAGTGCTACTCGATCTAGGCCCTGGCACGACTTTGGCCGACAAAACGACGCTGATAAAATACAAATACCAAAAATATTCACAAATGTTGGTTTCAGATACCATCTCGAGTCTCCAATAAGTTCTTCCCAAAGACGAGAAGATGATCGAATAACCTACATCAATAAGGGACAATTTTATGGAATCACTTTAGAATATATTCCCGATTCCGATAAGCCCATCAAAAATACAACAGTTAAGTTCGTTTTAATGCGTCATCATAAGAATTTATTGGACCAGATACGTGTATCTCGTATATAG
- Protein Sequence
- MLHFAIIIVVGLSAPSAKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATSAAVAAAAANVTTTATLAQQQQQQQQQQQSTIVSATGGGTGTVVITADQHRQQAATTTINIKREPEDLRKDPKNGTASNGSTASSGQKVIVLQQSPSPTQIHIKEPPLSPGSPTNHTEAMYAAGGGTQIYLQGPHQNSAAGPGSNVNTQTPSPGPYIGADGYGMYTTSRLTTAPTTTFISEPYYREYFSTTDGQGYAPTRTIYGDSEGPQPGTTYEGRFTTTTTNSGIPPPHPSANISKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPVSVNSIQRGAVSVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDSDKPIKNTTVKFVLMRHHKNLLDQIRVSRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01399228;
- 80% Identity
- -