Basic Information

Insect: Polistes metricus
Gene Symbol: hb
Assembly: GCA_010416925.1
Location: QUOH01000018.1:2113336-2115478[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.72 49 4.3 0.7 1 23 99 121 99 121 0.91

2 7 0.089 6.1 7.2 1.8 1 23 132 154 132 154 0.98

3 7 0.2 14 6.1 3.9 2 23 162 183 161 183 0.96

4 7 7.9e-05 0.0054 16.8 3.9 1 23 189 211 189 211 0.99

5 7 0.0015 0.1 12.8 2.1 1 23 217 241 217 241 0.93

6 7 0.37 26 5.2 1.0 3 23 499 519 498 519 0.97

7 7 0.05 3.4 8.0 0.5 1 23 525 549 525 549 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.72	49	4.3	0.7	1	23	99	121	99	121	0.91
2	7	0.089	6.1	7.2	1.8	1	23	132	154	132	154	0.98
3	7	0.2	14	6.1	3.9	2	23	162	183	161	183	0.96
4	7	7.9e-05	0.0054	16.8	3.9	1	23	189	211	189	211	0.99
5	7	0.0015	0.1	12.8	2.1	1	23	217	241	217	241	0.93
6	7	0.37	26	5.2	1.0	3	23	499	519	498	519	0.97
7	7	0.05	3.4	8.0	0.5	1	23	525	549	525	549	0.92

Sequence Information

Coding Sequence: atgataagaaatagTATTGCATGCGTCGTTAATATACAAAATCAACATGAATTCcagcatttaaaaaaaaagaagaaatattacgATCAATTTTCTACTATACCATTTTGGAATTTATCTGATATAGTTATAgataACGTAGAAACTATCGATTTGAATTGCAAATCAGAAAACATGGATAACAAGCAACGATCATCCAGTGATTCTAGCGAATTAGGATCTCTGGGAGATTCTCAAATGGGATTATGTGCTGACATGAATACCGTGATGAATAACAACGGTAATGAAGAGACTTATTCGTGTCCCATTTGTCGCACAGTCAATTCTGATAGaACTAGTCACCTCGAGCACATGGCCACTCATAGGTCAAAAGCAAATAGTAAAACGAAGACATTCAGTTGCAGACAGTGTCAATTTATTGCAACAACAAAATACGAATATTGGGAACACAGCCGAAAGCATATAAAACCGGAGAAGTTATTAACATGCTCACAGTGTCCATTCGTAACAGAATTCAAGCATCATCTGGACTACCACATGACAAATCATAGTGGAATTAAGCCATTCAAATGTGATCAGTGTTCTTATAGTTGCGTTAATAATTCCATGTTAAGAAGTCATTTAAAATCTCATTTAAAGATTTATCAATATAGGTGTGCTGATTGCCCCTTCGCATCAAAATATCAACAcacgttaaaaattcatttaagaAAACAGAATCATCAGCCGGCTGTGATACTGAATGAAGACGGAACACCTGATCCTATTAAATTTATAGACGTTTATGGTAGATGCCGAGGACCAAGGAAAAACTCTAAAACGGCGAAGCAACGAAAGAAAGCTGTTCAAACGACAAGCGTCGAACAAACTAATGCAATACCGAGTATGGTAGCTCATACTCAAGATTCATCTATGGGTTCTCTCGTTGCTTCAGTGGATTCGGCAAATTCGATTGGTCCTTTTACTAGTGGCTTAGTTAATGACGTTATCAACGAAGTGAACATTCCCGATCAGCTTCCGGTTATGGTGAATAAAACAACTTCACCTTCATGTTCGAATCAATTATTGTCAGATGGAGAATCAAGAAAACAATTATCTCCAATGGATTTTAATACATGTGGGTCTGATGAAAACAGCATTATTAGCGATCAGCAGCAATCATTTACcttgaaaaaaggaaacagtAGCAGTCGACGAAAAGGTAAAGCATACAAACTTAATCGTGAACTCGTCATTTCGGATAGTTCGAGTGAAAATGAGGAAAGAAATAAGTCGAACTGCTACAGCGGGgtttctataataaatgaaaacaactATCCCAACTGTAATGATCGTTCTAATGATCGCTGGAATAATCTTTCGCATGAAAAAGATCAAtgcgaaaataattcattagatCAACCTATAGATTATTCGATGAATGGTCCACGATTTCATAGTCCATCGACTTCGATTGATTCGATTGTTAATATGGATTCTACGAAGTTCCTGTTATGTAAATATTGTGAAATAATGTTTCTTCACGAAATTATGTATAAAGTGCATATGAGTTACCACGGGACAGAAAATCCATACGTTTGCGTTAAATGCGGACACAATGCCATCGATAAGGTGTCCTTTTTCATCCACATAAGTACATCTagtcattaa
Protein Sequence: MIRNSIACVVNIQNQHEFQHLKKKKKYYDQFSTIPFWNLSDIVIDNVETIDLNCKSENMDNKQRSSSDSSELGSLGDSQMGLCADMNTVMNNNGNEETYSCPICRTVNSDRTSHLEHMATHRSKANSKTKTFSCRQCQFIATTKYEYWEHSRKHIKPEKLLTCSQCPFVTEFKHHLDYHMTNHSGIKPFKCDQCSYSCVNNSMLRSHLKSHLKIYQYRCADCPFASKYQHTLKIHLRKQNHQPAVILNEDGTPDPIKFIDVYGRCRGPRKNSKTAKQRKKAVQTTSVEQTNAIPSMVAHTQDSSMGSLVASVDSANSIGPFTSGLVNDVINEVNIPDQLPVMVNKTTSPSCSNQLLSDGESRKQLSPMDFNTCGSDENSIISDQQQSFTLKKGNSSSRRKGKAYKLNRELVISDSSSENEERNKSNCYSGVSIINENNYPNCNDRSNDRWNNLSHEKDQCENNSLDQPIDYSMNGPRFHSPSTSIDSIVNMDSTKFLLCKYCEIMFLHEIMYKVHMSYHGTENPYVCVKCGHNAIDKVSFFIHISTSSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01234665; iTF_01233996;
90% Identity: iTF_01234665; iTF_01233996;
80% Identity: -