Pmer011723.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polistes metricus
Gene Symbol
ZFX
Assembly
GCA_010416925.1
Location
QUOH01000027.1:2663953-2672138[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.9 62 4.0 0.1 3 23 23 43 21 43 0.94
2 15 0.92 63 4.0 2.7 1 19 900 918 900 923 0.75
3 15 0.0027 0.18 12.0 1.9 2 23 1004 1026 1003 1026 0.96
4 15 0.0076 0.52 10.5 0.1 2 23 1039 1060 1039 1060 0.98
5 15 2e-05 0.0014 18.6 2.1 2 23 1063 1084 1062 1084 0.97
6 15 0.022 1.5 9.1 0.4 1 23 1090 1112 1090 1112 0.95
7 15 2.2e-05 0.0015 18.5 4.5 2 23 1119 1140 1118 1141 0.95
8 15 0.15 11 6.4 1.7 5 23 1154 1172 1153 1172 0.96
9 15 2e-05 0.0014 18.7 1.5 3 23 1179 1200 1178 1200 0.97
10 15 0.0091 0.63 10.3 0.3 2 23 1216 1236 1215 1236 0.97
11 15 6e-05 0.0042 17.1 0.7 1 20 1242 1261 1242 1264 0.92
12 15 7.5e-05 0.0052 16.9 2.7 1 23 1272 1294 1272 1294 0.99
13 15 0.0021 0.14 12.3 3.2 1 23 1300 1322 1300 1322 0.97
14 15 3.8e-06 0.00026 20.9 3.9 1 23 1328 1350 1328 1350 0.99
15 15 0.0013 0.09 12.9 6.3 1 23 1356 1378 1356 1379 0.96

Sequence Information

Coding Sequence
ATGGATATCGGCATCGTTGGTAACCCTACAACGGGGGGTCCATCCAACCCAGGGGGGGCCTTGGCCTGTCCCGTTTGTACTCTTTATTTGCGTGAAGGTATTAGCCTTCAAAGACATTTGGATACACATCCCAAGGAACAGGTCATAGAGGCACTCATTAAAGCAAGCTCTCAGACGCAACAACTTCAATCTTCTATGTCAATACCTTCTGTTACTTCTAGTATACAATCACTACAGAATACACCGCAACAACacatacaacaacaacaacagactACTGCGCATGTATCTGCCGCACAGTCACCGTACCCCATAGGGCCTATATTTGAATGTCCACCCATCGGTACTATGATGCCTCCTCAGTTTGCCTCCTTTAGTTATCAACAATTTGTCAATAATGGGACCATGATGATACCGCAGTACGCTATGGCACCACAGACTAATCAGATGATGCAAATGTTGTATAATCCTTATGGTATGTATCAACAGCAACAGATACCTACTGTTCAAATGATCTCTCCGGTTGCAGCCATTCCTAATACCACTAGGATGAGACCTGTGGTTAGTATGTCAGGCGAAACTAATACCAGGACTACCATCACAGTACCTGTCAATAGTTCTGAACCTAAACAGATCTTACCTGAAATATTGCCAGAGCCAGAAGTAGAAAACGAACATGATCTGCCTGACATTAATTTCCCTGCATCGCCCGAAGTATCCAACAATAATACTTCCATACAACAAGAtggaaatgataataatagaattcAATTAGAACATAGAACGcaacaaatacaaaataatactattCAGGATCAAAATAGCGTGCAACACGAATACAATTCCATTCCTAGATCTTTAACTATAACTTGTAACATCGAAAATGAAGACGACGAGAATGCCGAAAGCGTACTGCCTGATATagatgaaagagaaacaacGCACATGGTTGCTTCTATCGTACAATGCAAATCTACTCATTACGAAGAACAATCAGAAACTCAAAGGTTCGATCAAGAATACAAAGATGATAGTAGTAAACTCGATGTAAATCCTCAAGGTGTATTAGAAAGTGCTTTggaaattgaagaagaaaaaatagaagaggaTAAATCTTTAAccgaggaaaaggaaaaaagcgAAAATGAATCTGTCCCATCTCAAGTTCCTGCTATAGAAACGATTAAAGATATAGTGCAACCTGAGGTTGAACAATTGGAACAgttattaatcaatattatGGAATCggaatttaataattctacaACCAAGGAGGATGATGTAGTACagcaggaagaagaagaaaaaggaaattcgTCGATTCACACAgacgaagaaataataactCCTAATATAATAGATGTTACTCCGAGTTCtcaaaataatgatgataCTGATGAATGTCATATAGAAATGGAAATAACAGAGGAACCAAAAATATGCGTTGAAGAAAAATctgacaaaaattatattttatatcattacaAGGAGAGTTTATCTGCTCCACCTTCGCCAGCAGTACGAAAGAAATCGACTAGAACGTATTCAGTACGTTCTGAATATGGGTCGAATGAATTTCTCAGTGTTTATCCTGCTGGATTTGATGCTACCACGTTGcaagatgaagaagaggaagaggaagaagagaagaatgtGACAGAAGATAATTTTGATGAAGCGGATATGGAAATAGAAGCAATACCTAGTCCTCATACACCTTTCACAAAATATGGCGAAAGTTCAGATGTTGTTAGATCTCATACTCCATTGTCTGCCATTAGCGGTATATCAGTACTAAGAGTTAGAAAAGATTTAAGTAAACCTTGTTCTCCTGCATCTGTACATTCATTTTGTCATATGGATGCAGATAGTTTGAGTCACGATGAGGAAAGTAACGATTTAGGTGAAATTACGATAGAAAAGGATCCTATTAGTTGCCCTCAGATTGAAGAAGAAGTTAAAGTAGATAAATACGAAGAGAATGTACGTGAAAACgtggaaaagaaaggagataATTCTAATCATGTTTATCATCAATCTGTAATAACAGAACACGTTAGCCTATTTCCGCCAATTCATTCACAACAACCTGTTTTAATAGAAGATTCTTATTCGTTACCtaataacaaaaatcataGTCTCTTAAATTTATCCGAATCTATTAATCCAACTACAAGCACCGAATCAAAGAATTATCATTCTAACAAATCAATTATTCAGAAACAGTCAATGGAACttcttaatattaatgaaGATGCTCATGCTGGTCCAATGAACGTTTTTGAGTTTGATGGACTCCAAATTTTAGTTCCTAGTACATTTATAAGTGAATCATCACAAAAAGCAGTTAGTGCGACGAGCCAACAATCAATGGCCAGTAGCGAAGGAGGTGCAGGTATCGATGAGGAAGTCAAAAGTGTTAATATGCGAGCTGACGAGACTATGCCACCCAGAGGTGAATTATCGGAACAAGAAAGTAATGGTTGTACAGAACAATCAGCTTGGCAGGTTTATATGGGTCAAGAATCTTCAAGAATGTCAACTTCTTATGATCTAATGGCAAGAGAAAGTTGGGAAGAATCGGAAGGATCGGATAATGAAATTAGTGGTCCATTGTTAGATAGTCGATCTTTAGCAACACATTTTACATCTAGCTTATTCTTAGATCGTGATAGAAAGACGCCTACCAAAAGGACATTTAAGTGTTCACATTGCCCCGAGGTATTTGACTGTCCTAAAGAACGTAGAGTACATAGTACAATGGTGCACAAAGAATCTGGACCTAGCAGTAGTAGAGATGCAATGGAAGCACCAGAagttaaagatattaaattattagatgGTCGTATGAATGTGtttgatgatatttttgtaCCAGGGTTACACGTGCAACAAATATATCATCAACAACCATTATTACATCAACTTCAACCGCCACAGCcagatttaacaaaaatagagACAGATCAGAAAGGTGAAAACTTGACAATTCCTTCTACGGTAGAAGTAACATGTGCATTATGCAATCAACGATTTAGTAGTGAAAAAGCTTTACAATTACATCATAAGAGAATGCATATAGTTGAAGTAGCCAAACGTATTCGTGAACAGGCTAAATGCGTAATATGCAACGAAGAATTTCCATCggttgtattatttaatgctcatttaaaaatacatccGTTAGAATGCGGACAATGCGGCAAATACTTTTATAGAAAACAGAATTATAAGTTACATATGAAACGACATTTAGGAATCAAGCCGTTCCCTTGTTCGCTATGTGATAAGGCATTTTtaactaaacaaaaattagatgAACATACCAACGGACATACAGGTAATGCCCCtgttaaatgtaatttgtGTAATGAAACATTTCGTAGATATTCCAATTTAACACAGCACAAGAATAGACATCAtcttaacattaaaaaaaaattaaaagactaCATATGTCAGTGTGGAGAGATATTCcatacgaagaaaaaattagcTTGGCATAAGGAGACGCACGACGAAAAACCTAAGGCATGCACATACTGTAATGAAAGATTTATACATATGGCTAGTTTAACTCGACACATGCGTCGTGCTCACAATAGGAGATTTGTTCCTGATGCtcaaagagaaaacgaaaacgTCGAGTGTCcaatatgtaaatgtatttatttgagATCATCCTTAGCTGTTCACATGCGTGTCCATAACGGTGAAAAACCGTACGAATGTCAGGTATGTTCCAAGGCTTTTAGTACCAAATGGAATTTACAATTGCACAAGTGGACTCATGCAGCGCGCAGCACTAAACCATTCAAGTGCAACCAGTGTAGCGCCGCATTTTATCGACACAGTGATTATACTGCTCATATGAATTCTCATCGAAACGTACGTCCATATACGTGTAATTACTGCGGAGCTCAgttcattagaaaatataactgTTTAAGACACGTCAAAGAACACGAGGAGAACAAGGCATACACGTGTGACGTTTGCAACAAAACTTTCCATAGGTCTTATTATCTAAAAGAACATTTAAGAGTGCACTCAGGAGCAAGACCTTACACATGTCACATTTGTGGTAAATCAAGTGGTACGAAATCTAATCACAATAAACATGTAAGAATTCATCATGCCCGAGAACCTGTAAATACTGAAAACTAA
Protein Sequence
MDIGIVGNPTTGGPSNPGGALACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSQTQQLQSSMSIPSVTSSIQSLQNTPQQHIQQQQQTTAHVSAAQSPYPIGPIFECPPIGTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQTNQMMQMLYNPYGMYQQQQIPTVQMISPVAAIPNTTRMRPVVSMSGETNTRTTITVPVNSSEPKQILPEILPEPEVENEHDLPDINFPASPEVSNNNTSIQQDGNDNNRIQLEHRTQQIQNNTIQDQNSVQHEYNSIPRSLTITCNIENEDDENAESVLPDIDERETTHMVASIVQCKSTHYEEQSETQRFDQEYKDDSSKLDVNPQGVLESALEIEEEKIEEDKSLTEEKEKSENESVPSQVPAIETIKDIVQPEVEQLEQLLINIMESEFNNSTTKEDDVVQQEEEEKGNSSIHTDEEIITPNIIDVTPSSQNNDDTDECHIEMEITEEPKICVEEKSDKNYILYHYKESLSAPPSPAVRKKSTRTYSVRSEYGSNEFLSVYPAGFDATTLQDEEEEEEEEKNVTEDNFDEADMEIEAIPSPHTPFTKYGESSDVVRSHTPLSAISGISVLRVRKDLSKPCSPASVHSFCHMDADSLSHDEESNDLGEITIEKDPISCPQIEEEVKVDKYEENVRENVEKKGDNSNHVYHQSVITEHVSLFPPIHSQQPVLIEDSYSLPNNKNHSLLNLSESINPTTSTESKNYHSNKSIIQKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQVYMGQESSRMSTSYDLMARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCPEVFDCPKERRVHSTMVHKESGPSSSRDAMEAPEVKDIKLLDGRMNVFDDIFVPGLHVQQIYHQQPLLHQLQPPQPDLTKIETDQKGENLTIPSTVEVTCALCNQRFSSEKALQLHHKRMHIVEVAKRIREQAKCVICNEEFPSVVLFNAHLKIHPLECGQCGKYFYRKQNYKLHMKRHLGIKPFPCSLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICQCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGEKPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01514983;
90% Identity
iTF_01234520;
80% Identity
iTF_01234520;