Pmer001186.1
Basic Information
- Insect
- Polistes metricus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_010416925.1
- Location
- QUOH01000021.1:626846-636479[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-18 7.3e-15 54.1 0.1 1 45 670 715 670 715 0.96 2 2 1.8e-18 2.2e-15 55.7 0.0 1 43 1132 1175 1132 1177 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATCAGGACACCCTGTACAGCGGCACGCGCATCAGCGAatctacgacgacgacgacgacggcggcAGCGGGCCAGCCCCTCCACCGGCTTTATCCGACGTTGTCATCGTCTTGCAATCCGGTGCTCGGAAATCTGGGCCAGATCGGAGGGCCGCCCGGTGGTGGTCACCTGCTTCATCCGGCGCCATCGCCGACTATTACGCCAGCAGGAGCTACGACGATTCTTGCGACGGGTCTAGCGACGGGTCTGGGAACAGGGGTGACGACGGGGGTAGCGACGGGGGTCGCTACGGGGGTGGCAGGAGTGCCTGGGAGCTTGGTTGCTTCCACGGCTACCACGGCCACCGTCGTACCCACGATCGGTCACCTCAAACAAGACGTCTCATCTCTTCAGAGGCATCATCCTcaaaatcatcatcatcatcatcatcatcatcatcatcgtcatcctcCCTCTCATCTCCATACGCCGTCCTTGCTGGcccagcagcagcaacagcagcagcaggatCAGCTTTATCAGCAAAAACAGctgcaacagcaacaacagcaagaAGAATCGAGACGTTTGAGACCAGAGGAAATAAAGATCGAAGCGGACGAAGAAGAGTCCGCAGAAggcagtggtggtggtggtgttggtggtatCGTCGTACGAGAGAACGCGAGGACAGCGGATTTGGTGGCGACGAGtattacgacgacgacgacgacgacgacgacgacaacgacgacgacaaacTCGACGCAAACGACGAATACGGGTACCGCgagtacgacgacgacgtcgtcGTCGACTACGACGACAACGGCGACAACCGCTACGACGACCACGACAACcacgaccacgacgacgaaTACCTGCTGCGTCGCGAGTACTACGGCATCGGTGAATTTGGTCTCGTCGAGAAGACGACGTCGAGCGAGAAGACAAAACGACGGAGAGGAAGCCGACgccgaggaggaggaggacgacggggaggaggaggaggaaggaaacGAGGTGGAAGACTCGAGGACGCGAGGAGAGGAACCGGAAAAACGGCTAAAACTCGACGAGGACGTCGATAGGTCCGTCAGTAGTCCTCACAGAACGGATATCGAACGAGCGTCCGTCAATCTTTCGGCTACCAACGGTACGAACGACAACAACGCGGCGGAAGGGACCAAGGAACGGGTAGGGGAGCTCGCGTTGGAACGGATACCAGTGACGCAAGCTTTACTCagagttaaaaaagaagaggagttACAGGAGGTGccaggtggtggtggtggtggtggtggtttagGAATCGAAAGGACGACCCCGGCTTCCGATTCGGAAGGGACCAGAAAAGTTGGTGGTAGCGTGGCTGCTGCTGTTGGTGGTGGCGTTGTTGGCGGTGTCGGTGTCATATCAAACGAGGCTGCTGAAATAACGGCGAAAAGTATCGTTCCGCCTTACTTTATAACGAGTAGACGTACGAGTCCACCGCCCGAAGATTGGAAGCCTTTAGACAAGTGTTACTTCTGCCTCGATGGCAAGCTGCCCCACGACGATCAAGCGCCGCTCAGTCCACAGAGCGACAGCAGCAGTAGTTCGCGATCGGTGGAGTCACCGATGTCGGTCCAAGTCGACCCAATGGCGGCGTCCGTCGTCGCGGCCGCTCTCAGCGGTACTTACCCGACTTTATTGCCTCAGTGGTGCTTACCACCAAGAGAGGCACCTCTCGTCGGGGTACAGGCTCATCAGGACAGTGCCACGTCGGTCGATCAACCACTCGATCTCTCGGCGAAACCGAAAAATTCTCAGGATAACAACATATCTCCGCtggaacaacaaaaaatacctCTGAGGATGCCCCCGGGTATGGACTCCAAGAGCATCTTCAACTCGTGTTACCGCGCGAAACCGCGTATTGCCGTGCCAGTGACGGCAGCGGCAGCGGCTGTAGCTGCGGCGACAGTGGTGGGTGCAGGGGGTAGCGTCAGCAGGAAGACTTACACCGAGGAAGAATTACAGGCGGCCCTAAGAGATATCCAGAGTGGAAAACTCGGCACGCGAAGGGCAGCCGTGATTTATGGGATACCAAGAAGCACCCTACGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTCTCTAGCACCCATTCACACCCTCACGAGTCCGGCGCCCaagccaccaccaccaccaccatcaccaccaccaccaccatcaccactacAACACCACCAAATACGACCCAAAACGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACGCGGCCACTCGGCGTTCGCGAGGTTTCAAGGCACGAGGTGGACGAGAAAGAACTATCGGGAgcggaagaggaaaaagaggtTGAGAAAGCACTCCTGAAACCTTTGTTGTCGTTGGAAGACCTCGTAAGGTTTTCCGCACTCGAAGGTAGCGGTGGAGATTCCCTGAGGACTCTGCTTCAGCGAGGACAGGATGTGGGTCAGGAATGGCCGGGTTTGGAACACGCAAACATCGGTCCGTACATTCAAAAAATGTTGGCCGCGGCTGCACCGTTCAAAGGACTAGAAACGCAAGACTACCGCATTCCGGAGGTGATGAGGAGGTTAATGAGCGAGGACAAGAGGTTGAATAAGAGCGTTAACGGAGATCAAGGACAGGGGCCGcatcagcaacaacagcagcagcagcttcaacatcatcagcatcatcacCATCCGGGATCGGGAGTAGGAGGGCATCAACAAAGTGGGCCGCAAACGAGCGGGCAATCGACGACGCAACAACAAGCGCATCAACATCTACGGGCACCGATAACCAACGACGATTTTAATCCGAGCATCGAGGAAGAAGCGAGCGATAGTGCTCAAGGCAGAGCAATATTGAAGATTCCGTCCTACAAGCCAGCGAGTACGCCAGGTTGTTCGAGTAACAAGAACGGCGAACCGACGTCGGCTGCTTTCGCTCAGGGATTTGCGGCAACGGCTTCGAGTCCAAATCTTTTGGAACGCGCTAGCCCCGCGTTTTCGGGAACGAGCAGCCCAACGAACTCTCTGGTCGGCAAGGCGGTGCCCGTTAATTTTCGAGAAGTCATCGCGAAGAGTATAAGCGTCAAGTTCCAAGAAGGTCAACAGGCGGGTGGTGTTACGGCCGGATTAGCGGGTTGTCAAGGGAGTAACGTGGGCCAGTCGCAGCAACAAATGATGCCTGAGCCGAGTCCTTTCAAAAGAGGTCGTTATACGCCACCTCAACCAGCGCTACCTGTCCAGCAAGCACAACAAAATAAACCGCAAAATCAGGACGCCAACAAGCCTAAACCCGGCACCGGTGGAAAGGGAACTAGACCGAAACGCGGAAAGTATAGGAATTACGATAGAGATAGCCTTGTGGAAGCTGTGCGCGCGGTCCAACGAGGCGAGATGAGTGTTCATCGAGCTGGTAGCTACTACGGCGTGCCGCATTCCACCCTCGAGTACAAAGTTAAAGAACGCCACCTGATGAGGCCACGCAAGAGGGACCAGAAGCAACCGGACGACAAGACGAAAGACGCCGCAGCCGCCGCGGCTGCAGTTATGAGACCTGGTACGACCGACAAAAAGGCCCCGCTTAAGGCTCAGAAGCCGTTCGCCCCGGCCAGTGGGATCCCTGGTCCTAACGGGCTGAAGATGCCGTTCATGGAAGGCATGCCGCATTTACCTTTTCCACCTTTTAACTTTTGGAGTCCTGCCCCGTTCTTACCCTCGCCGTTCATGCCGGGTGCCGCTAACGTACCGACCATGATTCCTGAACAATACTTTGCGTCGCAAAGAATGCGTGGTCTGCAAGAACAACAAAGGAGCGCAGCGATAGTTCAACAACAGCCGCATCAACAACACTCgcaacgagaaagagagggtggtGCGGCCGTCCCAACAACGGAAACACCTGGAACATCGACTGCGAGAAATTCTACGAGCGCTAAGACGCCCAGAGAATTAACGGAAAGCCTTTACGATGGTACCGGGGCGAATGGAAGTTTTTTGGACAATCTGATAAGATCGAGTCTCGAGACCGGTATACCTAGGGACCAGCGAATCTTGACCGAGACCAGGAGTCAACAGCAACAaacgtcgtcttcgtcgtctacgtcgtcgtcttcgtcgcaacaacagcaacaacagcaacagcaacaacaacaacaacaacaacaacaacagcagcaacatcCTGAAACGATGAGCGGCAAGGCCTTGATCGATCAACTCTGTAGGAATTCGAGGAGGACACCGTTGTCGCGTATAACGCAAGATAGTAGCGAAGACGAGAGTTACAGGGGACCATCGGGAACCTCCGGCAGACTCGATAGAGTACCAGAGAGACCAGAGAGGGTACCCACCGTTGATCTCAGTCCGTCGCCCTCCGAGAGGGCTCGTACCGACGATGGTAGCGATCGTTTGACCTCACCACCAACGCCTCTTTCCATATCTCGTACGGGAAGCAGGGACGAGGACAGTACTCGCGAGTCGAGGTTAGATCGTGCCAGTAGAGAACGCGAGATCCATAATGGTGCAGCTCAGGAAGATCGAGGAGGTACTACTCTcgtacaacaacaacagcaacagcaacaattGAATCATTACCCGGACTTACACAATCTTTATGCCGTAACAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGactcaacaacaacaacaacaacaacaacagcagcaacaacaacaacaacaacaacaaaaggaATATGCCGCTGTAAGCGGTTTGGTCGTGCAACTGCAAAGGGGCTACAACACCGGCAGCAGCAGGTCCGCCGAACAAACCAACAGCCAACAACCGGCGGAACAACGTGGACCTGTCATCGGTATGGAAGACTCCGTAGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRISESTTTTTTAAAGQPLHRLYPTLSSSCNPVLGNLGQIGGPPGGGHLLHPAPSPTITPAGATTILATGLATGLGTGVTTGVATGVATGVAGVPGSLVASTATTATVVPTIGHLKQDVSSLQRHHPQNHHHHHHHHHHRHPPSHLHTPSLLAQQQQQQQQDQLYQQKQLQQQQQQEESRRLRPEEIKIEADEEESAEGSGGGGVGGIVVRENARTADLVATSITTTTTTTTTTTTTTNSTQTTNTGTASTTTTSSSTTTTTATTATTTTTTTTTTTNTCCVASTTASVNLVSSRRRRRARRQNDGEEADAEEEEDDGEEEEEGNEVEDSRTRGEEPEKRLKLDEDVDRSVSSPHRTDIERASVNLSATNGTNDNNAAEGTKERVGELALERIPVTQALLRVKKEEELQEVPGGGGGGGGLGIERTTPASDSEGTRKVGGSVAAAVGGGVVGGVGVISNEAAEITAKSIVPPYFITSRRTSPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSDSSSSSRSVESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQAHQDSATSVDQPLDLSAKPKNSQDNNISPLEQQKIPLRMPPGMDSKSIFNSCYRAKPRIAVPVTAAAAAVAAATVVGAGGSVSRKTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHESGAQATTTTTITTTTTITTTTPPNTTQNATTPPPQVDEFNTRPLGVREVSRHEVDEKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQDVGQEWPGLEHANIGPYIQKMLAAAAPFKGLETQDYRIPEVMRRLMSEDKRLNKSVNGDQGQGPHQQQQQQQLQHHQHHHHPGSGVGGHQQSGPQTSGQSTTQQQAHQHLRAPITNDDFNPSIEEEASDSAQGRAILKIPSYKPASTPGCSSNKNGEPTSAAFAQGFAATASSPNLLERASPAFSGTSSPTNSLVGKAVPVNFREVIAKSISVKFQEGQQAGGVTAGLAGCQGSNVGQSQQQMMPEPSPFKRGRYTPPQPALPVQQAQQNKPQNQDANKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKTKDAAAAAAAVMRPGTTDKKAPLKAQKPFAPASGIPGPNGLKMPFMEGMPHLPFPPFNFWSPAPFLPSPFMPGAANVPTMIPEQYFASQRMRGLQEQQRSAAIVQQQPHQQHSQREREGGAAVPTTETPGTSTARNSTSAKTPRELTESLYDGTGANGSFLDNLIRSSLETGIPRDQRILTETRSQQQQTSSSSSTSSSSSQQQQQQQQQQQQQQQQQQQQHPETMSGKALIDQLCRNSRRTPLSRITQDSSEDESYRGPSGTSGRLDRVPERPERVPTVDLSPSPSERARTDDGSDRLTSPPTPLSISRTGSRDEDSTRESRLDRASREREIHNGAAQEDRGGTTLVQQQQQQQQLNHYPDLHNLYAVTTDKKSACDSKLIVDHSSQKTQQQQQQQQQQQQQQQQQQKEYAAVSGLVVQLQRGYNTGSSRSAEQTNSQQPAEQRGPVIGMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513389;
- 90% Identity
- iTF_01232920;
- 80% Identity
- -