Basic Information

Insect: Polistes fuscatus
Gene Symbol: -
Assembly: GCA_010416935.1
Location: QUOI01000015.1:833112-836551[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.9 3.1e+02 1.9 0.7 1 10 228 237 228 241 0.80

2 12 2 1.6e+02 2.8 0.4 13 23 274 284 272 284 0.88

3 12 1.1e-05 0.00084 19.4 1.5 1 23 290 312 290 312 0.98

4 12 0.0008 0.063 13.5 3.8 1 23 318 341 318 341 0.95

5 12 0.0095 0.76 10.1 3.5 1 21 347 367 347 369 0.95

6 12 0.00011 0.0084 16.2 1.9 1 23 375 397 375 397 0.99

7 12 6.1e-05 0.0048 17.0 0.8 1 23 403 425 403 425 0.98

8 12 0.00055 0.044 14.0 0.8 1 23 433 456 433 456 0.97

9 12 2.9e-05 0.0023 18.0 2.6 2 23 463 484 462 484 0.97

10 12 0.00011 0.0084 16.2 0.3 1 23 490 512 490 512 0.99

11 12 0.0028 0.22 11.8 7.3 1 19 518 536 518 541 0.91

12 12 1.2e-07 9.4e-06 25.5 1.2 1 23 555 577 555 577 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.9	3.1e+02	1.9	0.7	1	10	228	237	228	241	0.80
2	12	2	1.6e+02	2.8	0.4	13	23	274	284	272	284	0.88
3	12	1.1e-05	0.00084	19.4	1.5	1	23	290	312	290	312	0.98
4	12	0.0008	0.063	13.5	3.8	1	23	318	341	318	341	0.95
5	12	0.0095	0.76	10.1	3.5	1	21	347	367	347	369	0.95
6	12	0.00011	0.0084	16.2	1.9	1	23	375	397	375	397	0.99
7	12	6.1e-05	0.0048	17.0	0.8	1	23	403	425	403	425	0.98
8	12	0.00055	0.044	14.0	0.8	1	23	433	456	433	456	0.97
9	12	2.9e-05	0.0023	18.0	2.6	2	23	463	484	462	484	0.97
10	12	0.00011	0.0084	16.2	0.3	1	23	490	512	490	512	0.99
11	12	0.0028	0.22	11.8	7.3	1	19	518	536	518	541	0.91
12	12	1.2e-07	9.4e-06	25.5	1.2	1	23	555	577	555	577	0.98

Sequence Information

Coding Sequence: ATGACGAGCAACGTCGCAACAATAAAATTGGAAGAGGGACAGGAATCTGTAAGAGAGATTCAAACCTATCTTGAAACATTTAACAAGGAAATAGAAGTCGGACAAGTAGAGCAACCGCAACATGTCGAATTGCATCAAGTGGAAGGATTATCgggaggagaagaaggtgGTACCTACTTTATCGATCAAACtggtcaatattattatcaggCTAATAGCGATGAAACCCCTGTAATGACGCAAGTACAAATTCAAGAAGTCGAAGAAGGCGACGTTCATCAAGAAGGCGAAGTAACTCAAGAAGAGCAATATCATGAGATAGAAGAATTGGAAAATGTCGATGGGGATGAAGACGGTCAAGTTTCAAACAACGGAAACAATCAAGTTGTAATTAACTCTGGGGACGCGTATCAGACAGTTACTATAGTACCATCTGACACTAATCCTGGCGAAGTGAGTTACGTTTTGATAGTACAACAACCAGAATCCGAGGACAAAGATAGTAGACCTACCGAAGGTGAAAGCGGAGAGGTAGAAGAAGCAGAAGGCGAACAAGATTTAACTGTTTATGATTTTGAAGATAACGAGGATAACGAAGCTCCGGTAGAATCAGAAGCTGAAGATGacaaaactaaaataattaagtttCTTCCAAAGAAATCACAAACTGTAACTCAAGCGCATATGTGTAATTACTGTAACTACACCAGTCCCAAACGGTATgttgaattaaaatcatttgtttcattctatatatatatatatatatatatttatatatgtatatatatgtaaactgAAAAgcgatttaatatattcaggTACTTGCTTTCGCGACATATGAAATCTCATTCGGAAGAAAGACCACATAAGTGCAGCGTCTGCGAGAGGGGATTTAAAACTTTGGCTTCCCTTCAAAATCATGTCAATACGCATACCGGGACCAAACCTCACCATTGCAAATTTTGTGATAGCGCGTTTACTACATCCGGTGAACTTGTGAGACATGTAAGATACAGGCATACTCACGAAAAACCACATAAATGTCAAGAATGTGATTATGCTTCGGTTGAATTGTCTAAATTAAAACGACATATAAGATGTCATACGGGAGAACGTCCTTATCAGtgtCCACATTGTACATACGCAAGTCCAGATACCTTTAAATTAAAACGTCATCTTCGTATACATACAGGCGAAAAGCCATATGAATGTGATTTTTGCCAAGCGAGGTTTACACAATCAAATAGTTTAAAAGCACACAAATTAATACATAATGTAGGTGACAAACCTGTTTTTCAATGTGAGTTATGCCCCGCGACGTGCGGAAGAAAAACCGATCTTAGAATTCACGTGCAGAAATTGCATACCTCGGACAAAccattaaaatgtaaaagatgTGGAAAAACATTCCCTGAcaggtaTAGCTATAAGTTACATAGTAAAACACACGAAGGAGAAAAATGTTACAAATGTGACCTATGTCCGTATGCATCAATTTCTGCACGTCACTTGGAAAGTCATATGCTGATCCACACAGATCAAAAGCCATATCAATGCGATCATTGTTTTCAGTCTTTCAGACAAAAGCAATTGCTTAAACGTCATTGTAATCTTTATCATAATCCATCTTATGTTCCTCCACCGCCGCAAGAAAAAACTCATCAGTGTCCCGAGTGCGAAAGACCTTTCagACACAAAGGAAACCTTATTCGACACATGGCTGTTCATGATCCAGAATCATCTTTGCAAGAAAAACAGCAAGCCCTGAAGATGGGtagacaaaagaaaattcaaataatcgaTGGGCAAAGAGTCGAGGTTTTGACTGGTGATTTAGCTTCTAAACTTAAAGgttatgaagaagaagaggaagaagatgaagatgatatGATGGCGGTAGAAGGAAGCGATGGACAACAATATGTTGTATTAGAAGTAATTCAATTAGCTGACAATCAAAGCACCGATCAGCAGATGGCTGTGGTAGCTAGCGAAGATGGAGATTTGGTGATGCAAGATCCCTTGAGTCAAGAAAATAGTATGGTAGATGGAACGGGAGAAGATGGTTGCGAAGTCGAAGAGGATGACAGCGATATGCAggatttaaaaattgaatctGTAACGTCTTGTAACGCAAACAAATCTACATCTCAAAGTACGCAAAGCGATCCAAAATTGCAAAAAGAGATGGAGACGTGTTTTGGTTTCGATGaagaagaagaagaggaagaagaaggaagtagtaatataaacattttacaaaatatttcgtaa
Protein Sequence: MTSNVATIKLEEGQESVREIQTYLETFNKEIEVGQVEQPQHVELHQVEGLSGGEEGGTYFIDQTGQYYYQANSDETPVMTQVQIQEVEEGDVHQEGEVTQEEQYHEIEELENVDGDEDGQVSNNGNNQVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQPESEDKDSRPTEGESGEVEEAEGEQDLTVYDFEDNEDNEAPVESEAEDDKTKIIKFLPKKSQTVTQAHMCNYCNYTSPKRYVELKSFVSFYIYIYIYIYICIYM*TEKRFNIFRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYRHTHEKPHKCQECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDFCQARFTQSNSLKAHKLIHNVGDKPVFQCELCPATCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCFQSFRQKQLLKRHCNLYHNPSYVPPPPQEKTHQCPECERPFRHKGNLIRHMAVHDPESSLQEKQQALKMGRQKKIQIIDGQRVEVLTGDLASKLKGYEEEEEEDEDDMMAVEGSDGQQYVVLEVIQLADNQSTDQQMAVVASEDGDLVMQDPLSQENSMVDGTGEDGCEVEEDDSDMQDLKIESVTSCNANKSTSQSTQSDPKLQKEMETCFGFDEEEEEEEEGSSNINILQNIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730251;
90% Identity: iTF_01233159;
80% Identity: -