Pfus005675.1
Basic Information
- Insect
- Polistes fuscatus
- Gene Symbol
- bab1
- Assembly
- GCA_010416935.1
- Location
- QUOI01000003.1:14775322-14778177[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-13 4.6e-10 38.8 0.0 1 42 354 395 354 398 0.94
Sequence Information
- Coding Sequence
- ATGGCGAGCACACCGACGCAGCAATATAGCATTCGTTGGAACAACTACCACTCTAATTTATTATCAGTATTCGACgaacttttaataaatgaagCATTCGCTGACGTTACCTTATGTTTGGATGATGGTCGATCCCTCAAGTGCCACAAAGTGGTCCTTGCAGCCTGCTCTACTTACtttcaagatattttttacaaacaaccCCAGAAACATATAGTAGTAGCACTCAAAGATGTGGATTATTGTGAAATTAAGATTATATTGGAATACATGTATCGTGGTGTGGTACATGTGGCCCATGACCAACTTGAAAGTCTACTGAAACTTgcgaaatcatttaaaatcaaGGGTCTACTCGACATAAATGAAACCACCAATTTGcctttagaagaaaaagattacaGCAACGCGACGGCTACTACGGTGACACCGCCATGTTGTTCGCCATCCTCGCAAGCAATGTCCAACATAACGAGCAGTATCTCCCATAACAATAGAACATCACCGCCTCATTCAACTGAATTTGATGGCATTTCACCCggacCTAGGCCGCTACCTCCGGATGAAGACAAAAATTtttactaccactaccacttaCCACTGTTGACCTTGTCATCGCCGCCTTCTATTCTTCAAGCTATTAATCCAAATTCAGGACACTCCTCTACGCAAGGTATCACTATGAATGCTCCTGAGGAGATAGGATACGAAGAGTCGAATTATAAACGGAGGAAACGCATATTGCCGAAATATCCGATGATTCAGGACACACCGATATTACGAACAGTTTTGAACCAAAGACTTATCGATGGTTCACAACAACAAGTCTCACCGCCTATGTCATCGGATAACAACGAAGCAAGAAGTGATTTGATTGCGTCAAACGAAAGACCTGTACGAGAAACCGTTGCTGTCGCAAATTATGAATCTAATTCTTATGCCGAAATGATGGACGATGAAAACAAACAATCACATCCTCCAACTTCAAGCGATATGAATACAACAGgtcaccaccaccaccaccaccagaaGCCTGAATGGAAACGTTACAAACAATATACGCGGGAGAACATCAATTGCGCAATCGAGGCAGTGAGAAAGGGAGCGAGTGCATTGCAAGCAGCACGGAAGTACGGTGTCCCATCGCGTACACTTTACGATAAGGTAAAAAAATTAGGGATCACGAATAACCGACCTTCGAGACGTAGCACAAGCAGATCTGATGGGGCAAGTTTATCTGGTAATTTCGGTgatagtttaaacaattatggCAATAGTAGTGGCTTTGTTCCGGAATGTGATGATGATATCAGCAACAGTAACAACCAACACGAGAATATTTCGGGAATACAACCTGAAGCAAGTTTTGCCCcggatattaaaattaaagatgAATTGATCAAATTACAAATGGACGCCGATCAACAAACTAATCTAAATGAAACTCTTAttatcaaagaagaagaagatgaacaaCAATATTCAAATTACGAAGACGAAATTCAAGATCTTTCGATGCATtccaaaaataacaaaactatAACAACGACTAATATAGATGAGAAAGATTCGGATAATTTGAATCACagctaa
- Protein Sequence
- MASTPTQQYSIRWNNYHSNLLSVFDELLINEAFADVTLCLDDGRSLKCHKVVLAACSTYFQDIFYKQPQKHIVVALKDVDYCEIKIILEYMYRGVVHVAHDQLESLLKLAKSFKIKGLLDINETTNLPLEEKDYSNATATTVTPPCCSPSSQAMSNITSSISHNNRTSPPHSTEFDGISPGPRPLPPDEDKNFYYHYHLPLLTLSSPPSILQAINPNSGHSSTQGITMNAPEEIGYEESNYKRRKRILPKYPMIQDTPILRTVLNQRLIDGSQQQVSPPMSSDNNEARSDLIASNERPVRETVAVANYESNSYAEMMDDENKQSHPPTSSDMNTTGHHHHHHQKPEWKRYKQYTRENINCAIEAVRKGASALQAARKYGVPSRTLYDKVKKLGITNNRPSRRSTSRSDGASLSGNFGDSLNNYGNSSGFVPECDDDISNSNNQHENISGIQPEASFAPDIKIKDELIKLQMDADQQTNLNETLIIKEEEDEQQYSNYEDEIQDLSMHSKNNKTITTTNIDEKDSDNLNHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233568;
- 90% Identity
- iTF_01233568;
- 80% Identity
- iTF_01234434;